RNA–Protein interactions for RNA: ENST00000298537.11

SDCCAG3-201, Transcript of Serologically defined colon cancer antigen 3, humanhuman

TSL 1 (best) BASIC

Gene SDCCAG3, Length 2,314 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCCAG3-201ENST00000298537 DNMT1P26358 1616 aaKnown RBP37.64■■■■□ 3.62
SDCCAG3-201ENST00000298537 SIN3AQ96ST3 1273 aa37.62■■■■□ 3.61
SDCCAG3-201ENST00000298537 OSCARQ8IYS5 282 aa37.59■■■■□ 3.61
SDCCAG3-201ENST00000298537 GCC2Q8IWJ2 1684 aa37.56■■■■□ 3.6
SDCCAG3-201ENST00000298537 KCNH8Q96L42 1107 aa37.53■■■■□ 3.6
SDCCAG3-201ENST00000298537 AKNAQ7Z591 1439 aa37.53■■■■□ 3.6
SDCCAG3-201ENST00000298537 ZCCHC11Q5TAX3 1644 aaKnown RBP37.52■■■■□ 3.6
SDCCAG3-201ENST00000298537 NEUROD1Q13562 356 aa37.52■■■■□ 3.6
SDCCAG3-201ENST00000298537 UHRF1BP1LA0JNW5 1464 aa37.51■■■■□ 3.6
SDCCAG3-201ENST00000298537 TTC37Q6PGP7 1564 aa37.48■■■■□ 3.59
SDCCAG3-201ENST00000298537 KDM5BQ9UGL1 1544 aa37.47■■■■□ 3.59
SDCCAG3-201ENST00000298537 ROCK1Q13464 1354 aa37.46■■■■□ 3.59
SDCCAG3-201ENST00000298537 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP37.46■■■■□ 3.593e-9■■■■□ 25.7
SDCCAG3-201ENST00000298537 ZNF316A6NFI3 1004 aaPredicted RBP37.44■■■■□ 3.58
SDCCAG3-201ENST00000298537 CDC42BPBQ9Y5S2 1711 aa37.43■■■■□ 3.58
SDCCAG3-201ENST00000298537 TRIM52Q96A61 297 aa37.43■■■■□ 3.58
SDCCAG3-201ENST00000298537 HNRNPMP52272 730 aaKnown RBP eCLIP37.42■■■■□ 3.587e-6■□□□□ 8.4
SDCCAG3-201ENST00000298537 PREX2Q70Z35 1606 aa37.38■■■■□ 3.57
SDCCAG3-201ENST00000298537 DENND4BO75064 1496 aaPredicted RBP37.38■■■■□ 3.57
SDCCAG3-201ENST00000298537 CROCC2H7BZ55 1655 aa37.37■■■■□ 3.57
SDCCAG3-201ENST00000298537 NCOA1Q15788 1441 aa37.36■■■■□ 3.57
SDCCAG3-201ENST00000298537 SAMD9LQ8IVG5 1584 aa37.36■■■■□ 3.57
SDCCAG3-201ENST00000298537 MBD5Q9P267 1494 aa37.31■■■■□ 3.56
SDCCAG3-201ENST00000298537 ARHGAP5Q13017 1502 aa37.29■■■■□ 3.56
SDCCAG3-201ENST00000298537 ADGBQ8N7X0 1667 aa37.28■■■■□ 3.56
SDCCAG3-201ENST00000298537 ADGRL2O95490 1459 aa37.27■■■■□ 3.56
SDCCAG3-201ENST00000298537 FOXD1Q16676 465 aa37.26■■■■□ 3.56
SDCCAG3-201ENST00000298537 C9orf84Q5VXU9 1444 aa37.26■■■■□ 3.56
SDCCAG3-201ENST00000298537 MPHOSPH9Q99550 1183 aa37.26■■■■□ 3.55
SDCCAG3-201ENST00000298537 DIEXFQ68CQ4 756 aaKnown RBP37.25■■■■□ 3.55
SDCCAG3-201ENST00000298537 ANKRD30AQ9BXX3 1397 aa37.22■■■■□ 3.55
SDCCAG3-201ENST00000298537 MYO5CQ9NQX4 1742 aa37.22■■■■□ 3.55
SDCCAG3-201ENST00000298537 SYCP2Q9BX26 1530 aa37.21■■■■□ 3.55
SDCCAG3-201ENST00000298537 TSPY4P0CV99 314 aa37.19■■■■□ 3.54
SDCCAG3-201ENST00000298537 TSPY10P0CW01 314 aa37.19■■■■□ 3.54
SDCCAG3-201ENST00000298537 ARHGEF5Q12774 1597 aa37.18■■■■□ 3.54
SDCCAG3-201ENST00000298537 SHANK2Q9UPX8 1470 aa37.18■■■■□ 3.54
SDCCAG3-201ENST00000298537 PLCH2O75038 1416 aa37.15■■■■□ 3.54
SDCCAG3-201ENST00000298537 CCDC141Q6ZP82 1450 aa37.15■■■■□ 3.54
SDCCAG3-201ENST00000298537 WDR7Q9Y4E6 1490 aa37.15■■■■□ 3.54
SDCCAG3-201ENST00000298537 ARHGEF12Q9NZN5 1544 aa37.12■■■■□ 3.53
SDCCAG3-201ENST00000298537 ANKRD50Q9ULJ7 1429 aa37.12■■■■□ 3.53
SDCCAG3-201ENST00000298537 ASXL2Q76L83 1435 aa37.08■■■■□ 3.53
SDCCAG3-201ENST00000298537 SLC4A1APQ9BWU0 796 aaKnown RBP37.08■■■■□ 3.53
SDCCAG3-201ENST00000298537 KIF15Q9NS87 1388 aa37.07■■■■□ 3.52
SDCCAG3-201ENST00000298537 PZPP20742 1482 aa37.06■■■■□ 3.52
SDCCAG3-201ENST00000298537 TONSLQ96HA7 1378 aa37.06■■■■□ 3.52
SDCCAG3-201ENST00000298537 PPP1R15AO75807 674 aaPredicted RBP37.05■■■■□ 3.52
SDCCAG3-201ENST00000298537 TIMELESSQ9UNS1 1208 aa37.04■■■■□ 3.52
SDCCAG3-201ENST00000298537 EFCAB2Q5VUJ9 269 aa37.03■■■■□ 3.52
SDCCAG3-201ENST00000298537 KIAA1107Q9UPP5 1409 aa37.01■■■■□ 3.51
SDCCAG3-201ENST00000298537 RSPH4AQ5TD94 716 aa37■■■■□ 3.51
SDCCAG3-201ENST00000298537 ANKRD30BQ9BXX2 1392 aa36.96■■■■□ 3.51
SDCCAG3-201ENST00000298537 TRAPPC8Q9Y2L5 1435 aa36.95■■■■□ 3.51
SDCCAG3-201ENST00000298537 PLEKHH2Q8IVE3 1493 aa36.95■■■■□ 3.51
SDCCAG3-201ENST00000298537 ABCC1P33527 1531 aa36.94■■■■□ 3.5
SDCCAG3-201ENST00000298537 NPM1P06748 294 aaKnown RBP eCLIP36.94■■■■□ 3.5
SDCCAG3-201ENST00000298537 ABCA9Q8IUA7 1624 aa36.9■■■■□ 3.5
SDCCAG3-201ENST00000298537 NUP155O75694 1391 aa36.9■■■■□ 3.5
SDCCAG3-201ENST00000298537 MAST1Q9Y2H9 1570 aa36.89■■■■□ 3.5
SDCCAG3-201ENST00000298537 ACIN1Q9UKV3 1341 aaKnown RBP36.88■■■■□ 3.49
SDCCAG3-201ENST00000298537 AFAP1Q8N556 730 aa36.88■■■■□ 3.49
SDCCAG3-201ENST00000298537 PKD2Q13563 968 aa36.87■■■■□ 3.49
SDCCAG3-201ENST00000298537 FANCAO15360 1455 aa36.85■■■■□ 3.49
SDCCAG3-201ENST00000298537 CYB5RLQ6IPT4 315 aa36.84■■■■□ 3.49
SDCCAG3-201ENST00000298537 ARAP3Q8WWN8 1544 aa36.83■■■■□ 3.49
SDCCAG3-201ENST00000298537 HIRIP3Q9BW71 556 aaPredicted RBP36.82■■■■□ 3.48
SDCCAG3-201ENST00000298537 L3MBTL2Q969R5 705 aa36.79■■■■□ 3.48
SDCCAG3-201ENST00000298537 RPRD2Q5VT52 1461 aaKnown RBP36.77■■■■□ 3.48
SDCCAG3-201ENST00000298537 PLXNC1O60486 1568 aa36.77■■■■□ 3.48
SDCCAG3-201ENST00000298537 KDM5DQ9BY66 1539 aa36.73■■■■□ 3.47
SDCCAG3-201ENST00000298537 MIER1Q8N108 512 aa36.73■■■■□ 3.47
SDCCAG3-201ENST00000298537 GRWD1Q9BQ67 446 aaKnown RBP eCLIP36.72■■■■□ 3.473e-7■■□□□ 12.6
SDCCAG3-201ENST00000298537 SPAG9O60271 1321 aaKnown RBP36.72■■■■□ 3.47
SDCCAG3-201ENST00000298537 RIMBP3CA6NJZ7 1639 aa36.72■■■■□ 3.47
SDCCAG3-201ENST00000298537 RIMBP3BA6NNM3 1639 aa36.72■■■■□ 3.47
SDCCAG3-201ENST00000298537 RIMBP3Q9UFD9 1639 aa36.72■■■■□ 3.47
SDCCAG3-201ENST00000298537 ADGRL1O94910 1474 aa36.7■■■■□ 3.47
SDCCAG3-201ENST00000298537 SCAPERQ9BY12 1400 aa36.7■■■■□ 3.47
SDCCAG3-201ENST00000298537 TEX14Q8IWB6 1497 aa36.66■■■■□ 3.46
SDCCAG3-201ENST00000298537 FAM135AQ9P2D6 1515 aa36.66■■■■□ 3.46
SDCCAG3-201ENST00000298537 DUOX2Q9NRD8 1548 aa36.66■■■■□ 3.46
SDCCAG3-201ENST00000298537 ZFYVE16Q7Z3T8 1539 aa36.65■■■■□ 3.46
SDCCAG3-201ENST00000298537 CD109Q6YHK3 1445 aa36.65■■■■□ 3.46
SDCCAG3-201ENST00000298537 UNC13BO14795 1591 aa36.6■■■■□ 3.45
SDCCAG3-201ENST00000298537 NBPF8Q3BBV2 869 aa36.59■■■■□ 3.45
SDCCAG3-201ENST00000298537 ERBINQ96RT1 1412 aa36.57■■■■□ 3.45
SDCCAG3-201ENST00000298537 RTEL1-TNFRSF6BF6WH68 1400 aa36.56■■■■□ 3.44
SDCCAG3-201ENST00000298537 MYT1LQ9UL68 1186 aa36.56■■■■□ 3.44
SDCCAG3-201ENST00000298537 ATP7AQ04656 1500 aa36.54■■■■□ 3.44
SDCCAG3-201ENST00000298537 INO80Q9ULG1 1556 aaPredicted RBP36.53■■■■□ 3.44
SDCCAG3-201ENST00000298537 MAGI2Q86UL8 1455 aa36.47■■■■□ 3.43
SDCCAG3-201ENST00000298537 IQGAP3Q86VI3 1631 aa36.46■■■■□ 3.43
SDCCAG3-201ENST00000298537 DDX10Q13206 875 aaKnown RBP36.43■■■■□ 3.42
SDCCAG3-201ENST00000298537 PLA2R1Q13018 1463 aa36.43■■■■□ 3.42
SDCCAG3-201ENST00000298537 HSPA5P11021 654 aaKnown RBP36.4■■■■□ 3.42
SDCCAG3-201ENST00000298537 KIDINS220Q9ULH0 1771 aa36.39■■■■□ 3.42
SDCCAG3-201ENST00000298537 ZNF518AQ6AHZ1 1483 aa36.39■■■■□ 3.42
SDCCAG3-201ENST00000298537 ZNF326Q5BKZ1 582 aaKnown RBP36.39■■■■□ 3.42
SDCCAG3-201ENST00000298537 POGZQ7Z3K3 1410 aa36.37■■■■□ 3.41
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms