RNA–Protein interactions for RNA: ENST00000297354.6

SBSPON-201, Transcript of somatomedin B and thrombospondin type 1 domain containing, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SBSPON, Length 3,801 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBSPON-201ENST00000297354 FHOD3Q2V2M9 1422 aa21.8■■□□□ 1.08
SBSPON-201ENST00000297354 NBPF8Q3BBV2 869 aa21.78■■□□□ 1.08
SBSPON-201ENST00000297354 RGL3Q3MIN7 710 aa21.77■■□□□ 1.08
SBSPON-201ENST00000297354 CARMIL1Q5VZK9 1371 aa21.77■■□□□ 1.08
SBSPON-201ENST00000297354 HSP90AA2PQ14568 343 aaPredicted RBP21.76■■□□□ 1.07
SBSPON-201ENST00000297354 HSP90AA1P07900 732 aaKnown RBP21.75■■□□□ 1.07
SBSPON-201ENST00000297354 CUX2O14529 1486 aa21.75■■□□□ 1.07
SBSPON-201ENST00000297354 BICRAQ9NZM4 1560 aa21.73■■□□□ 1.07
SBSPON-201ENST00000297354 UPF2Q9HAU5 1272 aaKnown RBP21.73■■□□□ 1.07
SBSPON-201ENST00000297354 POGKQ9P215 609 aa21.71■■□□□ 1.07
SBSPON-201ENST00000297354 LRRC9Q6ZRR7 1453 aa21.71■■□□□ 1.07
SBSPON-201ENST00000297354 BECN1Q14457 450 aa21.7■■□□□ 1.06
SBSPON-201ENST00000297354 TRIM44Q96DX7 344 aaPredicted RBP21.7■■□□□ 1.06
SBSPON-201ENST00000297354 WDR43Q15061 677 aaKnown RBP eCLIP21.69■■□□□ 1.06
SBSPON-201ENST00000297354 FHAD1B1AJZ9 1412 aa21.69■■□□□ 1.06
SBSPON-201ENST00000297354 FMN1Q68DA7 1419 aa21.67■■□□□ 1.06
SBSPON-201ENST00000297354 ZBTB7CA1YPR0 619 aa21.67■■□□□ 1.06
SBSPON-201ENST00000297354 MS4A1P11836 297 aa21.67■■□□□ 1.06
SBSPON-201ENST00000297354 NEUROD2Q15784 382 aa21.66■■□□□ 1.06
SBSPON-201ENST00000297354 SMG6Q86US8 1419 aaKnown RBP21.66■■□□□ 1.06
SBSPON-201ENST00000297354 PNISRQ8TF01 805 aaKnown RBP21.66■■□□□ 1.06
SBSPON-201ENST00000297354 GOLGA6L2Q8N9W4 650 aaPredicted RBP21.65■■□□□ 1.06
SBSPON-201ENST00000297354 C20orf194Q5TEA3 1177 aa21.64■■□□□ 1.05
SBSPON-201ENST00000297354 FAM161AQ3B820 660 aa21.63■■□□□ 1.05
SBSPON-201ENST00000297354 ST20-MTHFSA0A0A6YYL1 179 aa21.63■■□□□ 1.05
SBSPON-201ENST00000297354 DCAF11Q8TEB1 546 aa21.63■■□□□ 1.05
SBSPON-201ENST00000297354 UACAQ9BZF9 1416 aa21.62■■□□□ 1.05
SBSPON-201ENST00000297354 PRXQ9BXM0 1461 aa21.61■■□□□ 1.05
SBSPON-201ENST00000297354 ZMYND15Q9H091 742 aa21.61■■□□□ 1.05
SBSPON-201ENST00000297354 L1TD1Q5T7N2 865 aaKnown RBP21.6■■□□□ 1.05
SBSPON-201ENST00000297354 FAM43AQ8N2R8 423 aa21.6■■□□□ 1.05
SBSPON-201ENST00000297354 WASHC2CQ9Y4E1 1318 aa21.59■■□□□ 1.05
SBSPON-201ENST00000297354 GOLGA6L3A6NEY3 463 aa21.59■■□□□ 1.05
SBSPON-201ENST00000297354 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.57■■□□□ 1.04
SBSPON-201ENST00000297354 PKD2Q13563 968 aa21.55■■□□□ 1.04
SBSPON-201ENST00000297354 CCDC146Q8IYE0 955 aa21.55■■□□□ 1.04
SBSPON-201ENST00000297354 FGD6Q6ZV73 1430 aa21.54■■□□□ 1.04
SBSPON-201ENST00000297354 USP47Q96K76 1375 aa21.53■■□□□ 1.04
SBSPON-201ENST00000297354 A0A0U1RQG5 324 aaPredicted RBP21.52■■□□□ 1.04
SBSPON-201ENST00000297354 NLRP13Q86W25 1043 aa21.5■■□□□ 1.03
SBSPON-201ENST00000297354 AQRO60306 1485 aaKnown RBP eCLIP21.5■■□□□ 1.03
SBSPON-201ENST00000297354 MYBBP1AQ9BQG0 1328 aaKnown RBP21.5■■□□□ 1.03
SBSPON-201ENST00000297354 NCLP19338 710 aaKnown RBP21.5■■□□□ 1.03
SBSPON-201ENST00000297354 ANP32BQ92688 251 aaKnown RBP21.5■■□□□ 1.03
SBSPON-201ENST00000297354 FOXD4L1Q9NU39 408 aa21.5■■□□□ 1.03
SBSPON-201ENST00000297354 IGF1RP08069 1367 aa21.5■■□□□ 1.03
SBSPON-201ENST00000297354 RRAGDQ9NQL2 400 aaPredicted RBP21.49■■□□□ 1.03
SBSPON-201ENST00000297354 CENPQQ7L2Z9 268 aaPredicted RBP21.48■■□□□ 1.03
SBSPON-201ENST00000297354 TIAM1Q13009 1591 aa21.47■■□□□ 1.03
SBSPON-201ENST00000297354 CLUAP1Q96AJ1 413 aa21.47■■□□□ 1.03
SBSPON-201ENST00000297354 MYH16Q9H6N6 1097 aa21.47■■□□□ 1.03
SBSPON-201ENST00000297354 RALBP1Q15311 655 aa21.46■■□□□ 1.03
SBSPON-201ENST00000297354 PANK2Q9BZ23 570 aa21.45■■□□□ 1.02
SBSPON-201ENST00000297354 TNNT2P45379 298 aaPredicted RBP21.44■■□□□ 1.02
SBSPON-201ENST00000297354 KTN1Q86UP2 1357 aaKnown RBP21.44■■□□□ 1.02
SBSPON-201ENST00000297354 TPRNQ4KMQ1 711 aa21.44■■□□□ 1.02
SBSPON-201ENST00000297354 ZNF644Q9H582 1327 aaPredicted RBP21.43■■□□□ 1.02
SBSPON-201ENST00000297354 PTPRKQ15262 1439 aa21.43■■□□□ 1.02
SBSPON-201ENST00000297354 MFAP1P55081 439 aaKnown RBP21.43■■□□□ 1.02
SBSPON-201ENST00000297354 BCL2L13Q9BXK5 485 aa21.43■■□□□ 1.02
SBSPON-201ENST00000297354 COG6Q9Y2V7 657 aa21.42■■□□□ 1.02
SBSPON-201ENST00000297354 PDE3BQ13370 1112 aa21.41■■□□□ 1.02
SBSPON-201ENST00000297354 NAIPQ13075 1403 aa21.41■■□□□ 1.02
SBSPON-201ENST00000297354 KIF15Q9NS87 1388 aa21.4■■□□□ 1.02
SBSPON-201ENST00000297354 ERICH3Q5RHP9 1530 aa21.4■■□□□ 1.02
SBSPON-201ENST00000297354 AMER1Q5JTC6 1135 aaPredicted RBP21.39■■□□□ 1.01
SBSPON-201ENST00000297354 NCOA1Q15788 1441 aa21.39■■□□□ 1.01
SBSPON-201ENST00000297354 RBM10P98175 930 aaKnown RBP21.39■■□□□ 1.01
SBSPON-201ENST00000297354 KNSTRNQ9Y448 316 aa21.39■■□□□ 1.01
SBSPON-201ENST00000297354 HFM1A2PYH4 1435 aa21.36■■□□□ 1.01
SBSPON-201ENST00000297354 PEG3Q9GZU2 1588 aa21.36■■□□□ 1.01
SBSPON-201ENST00000297354 PANK3Q9H999 370 aa21.36■■□□□ 1.01
SBSPON-201ENST00000297354 GOLGA2Q08379 1002 aa21.36■■□□□ 1.01
SBSPON-201ENST00000297354 CFDP1Q9UEE9 299 aaPredicted RBP21.36■■□□□ 1.01
SBSPON-201ENST00000297354 ADAMTS8Q9UP79 889 aa21.36■■□□□ 1.01
SBSPON-201ENST00000297354 FAM13BQ9NYF5 915 aa21.35■■□□□ 1.01
SBSPON-201ENST00000297354 SENP3Q9H4L4 574 aaPredicted RBP21.34■■□□□ 1.01
SBSPON-201ENST00000297354 PODXL2Q9NZ53 605 aa21.34■■□□□ 1.01
SBSPON-201ENST00000297354 BCAR3O75815 825 aa21.34■■□□□ 1.01
SBSPON-201ENST00000297354 FBLN2P98095 1184 aa21.34■■□□□ 1.01
SBSPON-201ENST00000297354 PANK1Q8TE04 598 aa21.33■■□□□ 1
SBSPON-201ENST00000297354 CFTRP13569 1480 aa21.31■■□□□ 1
SBSPON-201ENST00000297354 TOP2BQ02880 1626 aa21.31■■□□□ 1
SBSPON-201ENST00000297354 ROCK2O75116 1388 aaKnown RBP21.3■■□□□ 1
SBSPON-201ENST00000297354 HSP90AB1P08238 724 aaKnown RBP21.3■■□□□ 1
SBSPON-201ENST00000297354 RRP7AQ9Y3A4 280 aaKnown RBP21.29■■□□□ 1
SBSPON-201ENST00000297354 RNF123Q5XPI4 1314 aa21.29■■□□□ 1
SBSPON-201ENST00000297354 C8orf34Q49A92 452 aa21.29■■□□□ 1
SBSPON-201ENST00000297354 APAF1O14727 1248 aa21.28■■□□□ 1
SBSPON-201ENST00000297354 SEC24BO95487 1268 aa21.28■■□□□ 1
SBSPON-201ENST00000297354 CUX1P39880 1505 aa21.28■■□□□ 1
SBSPON-201ENST00000297354 MSNP26038 577 aaKnown RBP21.28■■□□□ 1
SBSPON-201ENST00000297354 HSCBQ8IWL3 235 aa21.28■■□□□ 1
SBSPON-201ENST00000297354 TRAK2O60296 914 aa21.28■■□□□ 1
SBSPON-201ENST00000297354 XRCC6P12956 609 aaKnown RBP eCLIP21.28■■□□□ 1
SBSPON-201ENST00000297354 DNTTIP2Q5QJE6 756 aaKnown RBP21.26■□□□□ 0.99
SBSPON-201ENST00000297354 MYOM3Q5VTT5 1437 aa21.25■□□□□ 0.99
SBSPON-201ENST00000297354 NCOA2Q15596 1464 aa21.24■□□□□ 0.99
SBSPON-201ENST00000297354 TSPY4P0CV99 314 aa21.24■□□□□ 0.99
SBSPON-201ENST00000297354 TSPY10P0CW01 314 aa21.24■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms