RNA–Protein interactions for RNA: ENST00000296742.11

CAGE1-201, Transcript of cancer antigen 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CAGE1, Length 2,821 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAGE1-201ENST00000296742 FOXD1Q16676 465 aa17.48■□□□□ 0.39
CAGE1-201ENST00000296742 NUP160Q12769 1436 aa17.47■□□□□ 0.39
CAGE1-201ENST00000296742 CARMIL2Q6F5E8 1435 aa17.46■□□□□ 0.39
CAGE1-201ENST00000296742 CFDP1Q9UEE9 299 aaPredicted RBP17.43■□□□□ 0.38
CAGE1-201ENST00000296742 UACAQ9BZF9 1416 aa17.43■□□□□ 0.38
CAGE1-201ENST00000296742 PRKCSHP14314 528 aaPredicted RBP17.43■□□□□ 0.38
CAGE1-201ENST00000296742 KDM6BO15054 1643 aa17.42■□□□□ 0.38
CAGE1-201ENST00000296742 PPP1R15AO75807 674 aaPredicted RBP17.42■□□□□ 0.38
CAGE1-201ENST00000296742 TCOF1Q13428 1488 aaKnown RBP17.41■□□□□ 0.38
CAGE1-201ENST00000296742 TONSLQ96HA7 1378 aa17.41■□□□□ 0.38
CAGE1-201ENST00000296742 MIA2Q96PC5 1412 aa17.4■□□□□ 0.38
CAGE1-201ENST00000296742 PLEKHD1A6NEE1 506 aa17.38■□□□□ 0.37
CAGE1-201ENST00000296742 TROQ12816 1431 aaPredicted RBP17.38■□□□□ 0.37
CAGE1-201ENST00000296742 KIF14Q15058 1648 aa17.36■□□□□ 0.37
CAGE1-201ENST00000296742 ABCC5O15440 1437 aa17.36■□□□□ 0.37
CAGE1-201ENST00000296742 DAPK1P53355 1430 aa17.36■□□□□ 0.37
CAGE1-201ENST00000296742 MPHOSPH9Q99550 1183 aa17.36■□□□□ 0.37
CAGE1-201ENST00000296742 FANCIQ9NVI1 1328 aa17.35■□□□□ 0.37
CAGE1-201ENST00000296742 IRX6P78412 446 aaPredicted RBP17.34■□□□□ 0.37
CAGE1-201ENST00000296742 PTPRGP23470 1445 aa17.34■□□□□ 0.37
CAGE1-201ENST00000296742 ATP10BO94823 1461 aa17.33■□□□□ 0.36
CAGE1-201ENST00000296742 DENND4BO75064 1496 aaPredicted RBP17.32■□□□□ 0.36
CAGE1-201ENST00000296742 ANP32CO43423 234 aa17.32■□□□□ 0.36
CAGE1-201ENST00000296742 GPATCH8Q9UKJ3 1502 aaKnown RBP17.32■□□□□ 0.36
CAGE1-201ENST00000296742 TIMELESSQ9UNS1 1208 aa17.3■□□□□ 0.36
CAGE1-201ENST00000296742 CHD1O14646 1710 aa17.3■□□□□ 0.36
CAGE1-201ENST00000296742 CAMSAP2Q08AD1 1489 aa17.29■□□□□ 0.36
CAGE1-201ENST00000296742 SLC4A1APQ9BWU0 796 aaKnown RBP17.29■□□□□ 0.36
CAGE1-201ENST00000296742 DEKP35659 375 aaKnown RBP17.29■□□□□ 0.36
CAGE1-201ENST00000296742 CCER2I3L3R5 266 aa17.27■□□□□ 0.36
CAGE1-201ENST00000296742 HNRNPMP52272 730 aaKnown RBP eCLIP17.27■□□□□ 0.36
CAGE1-201ENST00000296742 GCC2Q8IWJ2 1684 aa17.27■□□□□ 0.35
CAGE1-201ENST00000296742 ABCA8O94911 1581 aa17.26■□□□□ 0.35
CAGE1-201ENST00000296742 ERCC6L2Q5T890 1561 aa17.26■□□□□ 0.35
CAGE1-201ENST00000296742 DNMT1P26358 1616 aaKnown RBP17.25■□□□□ 0.35
CAGE1-201ENST00000296742 L3MBTL2Q969R5 705 aa17.24■□□□□ 0.35
CAGE1-201ENST00000296742 AKNAQ7Z591 1439 aa17.23■□□□□ 0.35
CAGE1-201ENST00000296742 ROCK1Q13464 1354 aa17.22■□□□□ 0.35
CAGE1-201ENST00000296742 MYT1LQ9UL68 1186 aa17.21■□□□□ 0.35
CAGE1-201ENST00000296742 NCOA1Q15788 1441 aa17.21■□□□□ 0.35
CAGE1-201ENST00000296742 HNRNPUQ00839 825 aaKnown RBP eCLIP17.2■□□□□ 0.34
CAGE1-201ENST00000296742 TSPY4P0CV99 314 aa17.17■□□□□ 0.34
CAGE1-201ENST00000296742 TSPY10P0CW01 314 aa17.17■□□□□ 0.34
CAGE1-201ENST00000296742 KDM5BQ9UGL1 1544 aa17.17■□□□□ 0.34
CAGE1-201ENST00000296742 ABCC10Q5T3U5 1492 aa17.17■□□□□ 0.34
CAGE1-201ENST00000296742 ITSN2Q9NZM3 1697 aa17.17■□□□□ 0.34
CAGE1-201ENST00000296742 NBR1Q14596 966 aa17.16■□□□□ 0.34
CAGE1-201ENST00000296742 CDC42BPAQ5VT25 1732 aa17.16■□□□□ 0.34
CAGE1-201ENST00000296742 ADCY10Q96PN6 1610 aa17.15■□□□□ 0.34
CAGE1-201ENST00000296742 PKD2Q13563 968 aa17.15■□□□□ 0.34
CAGE1-201ENST00000296742 ANKRD30BQ9BXX2 1392 aa17.15■□□□□ 0.34
CAGE1-201ENST00000296742 ANKRD30AQ9BXX3 1397 aa17.15■□□□□ 0.34
CAGE1-201ENST00000296742 ZNF326Q5BKZ1 582 aaKnown RBP17.15■□□□□ 0.34
CAGE1-201ENST00000296742 HSPA5P11021 654 aaKnown RBP17.14■□□□□ 0.33
CAGE1-201ENST00000296742 NBPF8Q3BBV2 869 aa17.13■□□□□ 0.33
CAGE1-201ENST00000296742 ANKRD50Q9ULJ7 1429 aa17.12■□□□□ 0.33
CAGE1-201ENST00000296742 C9orf84Q5VXU9 1444 aa17.12■□□□□ 0.33
CAGE1-201ENST00000296742 ANO8Q9HCE9 1232 aaPredicted RBP17.11■□□□□ 0.33
CAGE1-201ENST00000296742 PZPP20742 1482 aa17.1■□□□□ 0.33
CAGE1-201ENST00000296742 NUP155O75694 1391 aa17.1■□□□□ 0.33
CAGE1-201ENST00000296742 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.07■□□□□ 0.32
CAGE1-201ENST00000296742 PPP4R2Q9NY27 417 aa17.07■□□□□ 0.32
CAGE1-201ENST00000296742 KIF15Q9NS87 1388 aa17.07■□□□□ 0.32
CAGE1-201ENST00000296742 B4GALNT3Q6L9W6 998 aa17.07■□□□□ 0.32
CAGE1-201ENST00000296742 SHROOM2Q13796 1616 aa17.07■□□□□ 0.32
CAGE1-201ENST00000296742 EIF4G2P78344 907 aaKnown RBP eCLIP17.06■□□□□ 0.32
CAGE1-201ENST00000296742 NOP58Q9Y2X3 529 aaKnown RBP17.06■□□□□ 0.32
CAGE1-201ENST00000296742 RPRD2Q5VT52 1461 aaKnown RBP17.06■□□□□ 0.32
CAGE1-201ENST00000296742 C11orf95C9JLR9 678 aaPredicted RBP17.06■□□□□ 0.32
CAGE1-201ENST00000296742 WASHC2AQ641Q2 1341 aa17.05■□□□□ 0.32
CAGE1-201ENST00000296742 ADGRL2O95490 1459 aa17.05■□□□□ 0.32
CAGE1-201ENST00000296742 CROCC2H7BZ55 1655 aa17.05■□□□□ 0.32
CAGE1-201ENST00000296742 TTC37Q6PGP7 1564 aa17.04■□□□□ 0.32
CAGE1-201ENST00000296742 ADGBQ8N7X0 1667 aa17.04■□□□□ 0.32
CAGE1-201ENST00000296742 MBD5Q9P267 1494 aa17.04■□□□□ 0.32
CAGE1-201ENST00000296742 CDC42BPBQ9Y5S2 1711 aa17.04■□□□□ 0.32
CAGE1-201ENST00000296742 ARHGAP5Q13017 1502 aa17.04■□□□□ 0.32
CAGE1-201ENST00000296742 PAK3O75914 559 aaPredicted RBP17.03■□□□□ 0.32
CAGE1-201ENST00000296742 SAMD9LQ8IVG5 1584 aa17.03■□□□□ 0.32
CAGE1-201ENST00000296742 KDM2AQ9Y2K7 1162 aa17.03■□□□□ 0.32
CAGE1-201ENST00000296742 ABCC2Q92887 1545 aa17.02■□□□□ 0.32
CAGE1-201ENST00000296742 CNGB1Q14028 1251 aaPredicted RBP17.02■□□□□ 0.32
CAGE1-201ENST00000296742 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.02■□□□□ 0.31
CAGE1-201ENST00000296742 SYCP2Q9BX26 1530 aa17.01■□□□□ 0.31
CAGE1-201ENST00000296742 KIAA1107Q9UPP5 1409 aa17.01■□□□□ 0.31
CAGE1-201ENST00000296742 TEX14Q8IWB6 1497 aa17.01■□□□□ 0.31
CAGE1-201ENST00000296742 POLR3GLQ9BT43 218 aa17■□□□□ 0.31
CAGE1-201ENST00000296742 ERICH6BQ5W0A0 696 aa16.99■□□□□ 0.31
CAGE1-201ENST00000296742 CCDC141Q6ZP82 1450 aa16.98■□□□□ 0.31
CAGE1-201ENST00000296742 SALL2Q9Y467 1007 aaPredicted RBP16.98■□□□□ 0.31
CAGE1-201ENST00000296742 CLASP1Q7Z460 1538 aa16.98■□□□□ 0.31
CAGE1-201ENST00000296742 PREX2Q70Z35 1606 aa16.97■□□□□ 0.31
CAGE1-201ENST00000296742 SHANK2Q9UPX8 1470 aa16.96■□□□□ 0.31
CAGE1-201ENST00000296742 RGL3Q3MIN7 710 aa16.95■□□□□ 0.3
CAGE1-201ENST00000296742 RTL5Q5HYW3 569 aaPredicted RBP16.95■□□□□ 0.3
CAGE1-201ENST00000296742 AFAP1Q8N556 730 aa16.94■□□□□ 0.3
CAGE1-201ENST00000296742 ZCCHC11Q5TAX3 1644 aaKnown RBP16.94■□□□□ 0.3
CAGE1-201ENST00000296742 ARHGEF12Q9NZN5 1544 aa16.94■□□□□ 0.3
CAGE1-201ENST00000296742 DCAF11Q8TEB1 546 aa16.93■□□□□ 0.3
CAGE1-201ENST00000296742 EFCAB2Q5VUJ9 269 aa16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms