RNA–Protein interactions for RNA: ENST00000296577.8

ABCE1-201, Transcript of ATP binding cassette subfamily E member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ABCE1, Length 3,921 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCE1-201ENST00000296577 PRG4Q92954 1404 aaPredicted RBP12.71□□□□□ -0.37
ABCE1-201ENST00000296577 PTPN23Q9H3S7 1636 aa12.71□□□□□ -0.38
ABCE1-201ENST00000296577 SUPT6HQ7KZ85 1726 aaKnown RBP12.7□□□□□ -0.38
ABCE1-201ENST00000296577 DCAF11Q8TEB1 546 aa12.7□□□□□ -0.38
ABCE1-201ENST00000296577 CARD11Q9BXL7 1154 aa12.7□□□□□ -0.38
ABCE1-201ENST00000296577 EHBP1L1Q8N3D4 1523 aa12.7□□□□□ -0.38
ABCE1-201ENST00000296577 KIF21AQ7Z4S6 1674 aa12.69□□□□□ -0.38
ABCE1-201ENST00000296577 B4GALNT3Q6L9W6 998 aa12.69□□□□□ -0.38
ABCE1-201ENST00000296577 MAGI3Q5TCQ9 1506 aa12.68□□□□□ -0.38
ABCE1-201ENST00000296577 TMC1Q8TDI8 760 aa12.68□□□□□ -0.38
ABCE1-201ENST00000296577 THOC2Q8NI27 1593 aaKnown RBP12.67□□□□□ -0.38
ABCE1-201ENST00000296577 PRKRIP1Q9H875 184 aaPredicted RBP12.67□□□□□ -0.38
ABCE1-201ENST00000296577 NUP155O75694 1391 aa12.67□□□□□ -0.38
ABCE1-201ENST00000296577 IQGAP2Q13576 1575 aa12.67□□□□□ -0.38
ABCE1-201ENST00000296577 RBM19Q9Y4C8 960 aaKnown RBP12.66□□□□□ -0.38
ABCE1-201ENST00000296577 MRC2Q9UBG0 1479 aa12.66□□□□□ -0.38
ABCE1-201ENST00000296577 KIF7Q2M1P5 1343 aa12.65□□□□□ -0.38
ABCE1-201ENST00000296577 ABCA5Q8WWZ7 1642 aa12.63□□□□□ -0.39
ABCE1-201ENST00000296577 PLB1Q6P1J6 1458 aa12.63□□□□□ -0.39
ABCE1-201ENST00000296577 CCDC7Q96M83 1385 aa12.63□□□□□ -0.39
ABCE1-201ENST00000296577 UGGT2Q9NYU1 1516 aa12.63□□□□□ -0.39
ABCE1-201ENST00000296577 HECW1Q76N89 1606 aa12.62□□□□□ -0.39
ABCE1-201ENST00000296577 DAPK1P53355 1430 aa12.62□□□□□ -0.39
ABCE1-201ENST00000296577 ABCC5O15440 1437 aa12.61□□□□□ -0.39
ABCE1-201ENST00000296577 CARMIL2Q6F5E8 1435 aa12.61□□□□□ -0.39
ABCE1-201ENST00000296577 KDM6BO15054 1643 aa12.6□□□□□ -0.39
ABCE1-201ENST00000296577 ST20-MTHFSA0A0A6YYL1 179 aa12.6□□□□□ -0.39
ABCE1-201ENST00000296577 ANKRD30AQ9BXX3 1397 aa12.6□□□□□ -0.39
ABCE1-201ENST00000296577 SAMD9Q5K651 1589 aa12.6□□□□□ -0.39
ABCE1-201ENST00000296577 SENP3Q9H4L4 574 aaPredicted RBP12.59□□□□□ -0.39
ABCE1-201ENST00000296577 MIA2Q96PC5 1412 aa12.59□□□□□ -0.39
ABCE1-201ENST00000296577 ANKRD30BQ9BXX2 1392 aa12.58□□□□□ -0.4
ABCE1-201ENST00000296577 KIAA0586Q9BVV6 1533 aa12.57□□□□□ -0.4
ABCE1-201ENST00000296577 IFT140Q96RY7 1462 aa12.57□□□□□ -0.4
ABCE1-201ENST00000296577 USP47Q96K76 1375 aa12.57□□□□□ -0.4
ABCE1-201ENST00000296577 CC2D1BQ5T0F9 858 aaKnown RBP12.57□□□□□ -0.4
ABCE1-201ENST00000296577 CNTLNQ9NXG0 1405 aa12.57□□□□□ -0.4
ABCE1-201ENST00000296577 ANP32EQ9BTT0 268 aa12.56□□□□□ -0.4
ABCE1-201ENST00000296577 TARBP1Q13395 1621 aaKnown RBP12.56□□□□□ -0.4
ABCE1-201ENST00000296577 CCDC136Q96JN2 1154 aa12.56□□□□□ -0.4
ABCE1-201ENST00000296577 LRRIQ1Q96JM4 1722 aa12.55□□□□□ -0.4
ABCE1-201ENST00000296577 NUP153P49790 1475 aaKnown RBP12.55□□□□□ -0.4
ABCE1-201ENST00000296577 GRIN2AQ12879 1464 aa12.55□□□□□ -0.4
ABCE1-201ENST00000296577 PPP4R2Q9NY27 417 aa12.55□□□□□ -0.4
ABCE1-201ENST00000296577 TROQ12816 1431 aaPredicted RBP12.54□□□□□ -0.4
ABCE1-201ENST00000296577 ANKRD50Q9ULJ7 1429 aa12.54□□□□□ -0.4
ABCE1-201ENST00000296577 ADAMTS12P58397 1594 aa12.53□□□□□ -0.4
ABCE1-201ENST00000296577 WDR62O43379 1518 aa12.52□□□□□ -0.41
ABCE1-201ENST00000296577 PTPRGP23470 1445 aa12.52□□□□□ -0.41
ABCE1-201ENST00000296577 PBRM1Q86U86 1689 aa12.51□□□□□ -0.41
ABCE1-201ENST00000296577 CHGAP10645 457 aaKnown RBP12.51□□□□□ -0.41
ABCE1-201ENST00000296577 DISP1Q96F81 1524 aa12.51□□□□□ -0.41
ABCE1-201ENST00000296577 ROCK2O75116 1388 aaKnown RBP12.51□□□□□ -0.41
ABCE1-201ENST00000296577 CAMSAP2Q08AD1 1489 aa12.5□□□□□ -0.41
ABCE1-201ENST00000296577 NPM2Q86SE8 214 aaKnown RBP12.5□□□□□ -0.41
ABCE1-201ENST00000296577 TCOF1Q13428 1488 aaKnown RBP12.5□□□□□ -0.41
ABCE1-201ENST00000296577 NCOA1Q15788 1441 aa12.5□□□□□ -0.41
ABCE1-201ENST00000296577 KIF15Q9NS87 1388 aa12.5□□□□□ -0.41
ABCE1-201ENST00000296577 NBPF1Q3BBV0 1214 aa12.5□□□□□ -0.41
ABCE1-201ENST00000296577 ARHGEF11O15085 1522 aa12.5□□□□□ -0.41
ABCE1-201ENST00000296577 DENND4BO75064 1496 aaPredicted RBP12.49□□□□□ -0.41
ABCE1-201ENST00000296577 AKNAQ7Z591 1439 aa12.49□□□□□ -0.41
ABCE1-201ENST00000296577 RPRD2Q5VT52 1461 aaKnown RBP12.48□□□□□ -0.41
ABCE1-201ENST00000296577 ROCK1Q13464 1354 aa12.48□□□□□ -0.41
ABCE1-201ENST00000296577 GPATCH8Q9UKJ3 1502 aaKnown RBP12.47□□□□□ -0.41
ABCE1-201ENST00000296577 KIAA1107Q9UPP5 1409 aa12.47□□□□□ -0.41
ABCE1-201ENST00000296577 ZBED9Q6R2W3 1325 aa12.47□□□□□ -0.41
ABCE1-201ENST00000296577 KIAA0556O60303 1618 aa12.46□□□□□ -0.42
ABCE1-201ENST00000296577 C9orf84Q5VXU9 1444 aa12.46□□□□□ -0.42
ABCE1-201ENST00000296577 RAPGEF6Q8TEU7 1601 aa12.45□□□□□ -0.42
ABCE1-201ENST00000296577 NBR1Q14596 966 aa12.44□□□□□ -0.42
ABCE1-201ENST00000296577 SYNJ2O15056 1496 aa12.43□□□□□ -0.42
ABCE1-201ENST00000296577 NUDCQ9Y266 331 aa12.43□□□□□ -0.42
ABCE1-201ENST00000296577 EIF4G3O43432 1585 aaKnown RBP12.43□□□□□ -0.42
ABCE1-201ENST00000296577 KDM5BQ9UGL1 1544 aa12.41□□□□□ -0.42
ABCE1-201ENST00000296577 KIF14Q15058 1648 aa12.41□□□□□ -0.42
ABCE1-201ENST00000296577 PANK3Q9H999 370 aa12.41□□□□□ -0.42
ABCE1-201ENST00000296577 PZPP20742 1482 aa12.41□□□□□ -0.42
ABCE1-201ENST00000296577 CCDC144AA2RUR9 1427 aa12.41□□□□□ -0.42
ABCE1-201ENST00000296577 ATP10BO94823 1461 aa12.4□□□□□ -0.42
ABCE1-201ENST00000296577 AFAP1Q8N556 730 aa12.4□□□□□ -0.42
ABCE1-201ENST00000296577 MAGI1Q96QZ7 1491 aaPredicted RBP12.4□□□□□ -0.42
ABCE1-201ENST00000296577 PLIN1O60240 522 aa12.4□□□□□ -0.43
ABCE1-201ENST00000296577 PNISRQ8TF01 805 aaKnown RBP12.39□□□□□ -0.43
ABCE1-201ENST00000296577 TEX14Q8IWB6 1497 aa12.38□□□□□ -0.43
ABCE1-201ENST00000296577 MSH5O43196 834 aa12.38□□□□□ -0.43
ABCE1-201ENST00000296577 CDCA7LQ96GN5 454 aa12.38□□□□□ -0.43
ABCE1-201ENST00000296577 TNNT2P45379 298 aaPredicted RBP12.38□□□□□ -0.43
ABCE1-201ENST00000296577 EFCAB2Q5VUJ9 269 aa12.38□□□□□ -0.43
ABCE1-201ENST00000296577 GCC2Q8IWJ2 1684 aa12.38□□□□□ -0.43
ABCE1-201ENST00000296577 DNMT1P26358 1616 aaKnown RBP12.37□□□□□ -0.43
ABCE1-201ENST00000296577 TMF1P82094 1093 aa12.37□□□□□ -0.43
ABCE1-201ENST00000296577 KNSTRNQ9Y448 316 aa12.37□□□□□ -0.43
ABCE1-201ENST00000296577 WDR43Q15061 677 aaKnown RBP eCLIP12.37□□□□□ -0.43
ABCE1-201ENST00000296577 KTN1Q86UP2 1357 aaKnown RBP12.36□□□□□ -0.43
ABCE1-201ENST00000296577 MYBBP1AQ9BQG0 1328 aaKnown RBP12.36□□□□□ -0.43
ABCE1-201ENST00000296577 CEP170Q5SW79 1584 aa12.36□□□□□ -0.43
ABCE1-201ENST00000296577 KIF3BO15066 747 aa12.36□□□□□ -0.43
ABCE1-201ENST00000296577 EXOC6Q8TAG9 804 aa12.36□□□□□ -0.43
ABCE1-201ENST00000296577 RALBP1Q15311 655 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms