RNA–Protein interactions for RNA: ENST00000295911.6

CLRN1-201, Transcript of clarin 1, humanhuman

TSL 1 (best) BASIC

Gene CLRN1, Length 1,444 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1-201ENST00000295911 SETD5Q9C0A6 1442 aa13.63□□□□□ -0.23
CLRN1-201ENST00000295911 FXR2P51116 673 aaKnown RBP eCLIP13.63□□□□□ -0.23
CLRN1-201ENST00000295911 FAM50AQ14320 339 aaKnown RBP13.63□□□□□ -0.23
CLRN1-201ENST00000295911 FGD6Q6ZV73 1430 aa13.63□□□□□ -0.23
CLRN1-201ENST00000295911 ITGAEP38570 1179 aa13.62□□□□□ -0.23
CLRN1-201ENST00000295911 CHMP7Q8WUX9 453 aaPredicted RBP13.61□□□□□ -0.23
CLRN1-201ENST00000295911 EPRSP07814 1512 aaKnown RBP13.61□□□□□ -0.23
CLRN1-201ENST00000295911 NCOA2Q15596 1464 aa13.6□□□□□ -0.23
CLRN1-201ENST00000295911 DISP1Q96F81 1524 aa13.6□□□□□ -0.23
CLRN1-201ENST00000295911 RAB3GAP2Q9H2M9 1393 aa13.6□□□□□ -0.23
CLRN1-201ENST00000295911 MYOM3Q5VTT5 1437 aa13.59□□□□□ -0.23
CLRN1-201ENST00000295911 ARHGEF11O15085 1522 aa13.59□□□□□ -0.23
CLRN1-201ENST00000295911 ZNF316A6NFI3 1004 aaPredicted RBP13.59□□□□□ -0.23
CLRN1-201ENST00000295911 CEP170Q5SW79 1584 aa13.59□□□□□ -0.23
CLRN1-201ENST00000295911 CLEC11AQ9Y240 323 aa13.58□□□□□ -0.24
CLRN1-201ENST00000295911 RAPGEF6Q8TEU7 1601 aa13.58□□□□□ -0.24
CLRN1-201ENST00000295911 SPDYE1Q8NFV5 336 aaPredicted RBP13.57□□□□□ -0.24
CLRN1-201ENST00000295911 NUP160Q12769 1436 aa13.57□□□□□ -0.24
CLRN1-201ENST00000295911 PTPN23Q9H3S7 1636 aa13.56□□□□□ -0.24
CLRN1-201ENST00000295911 MAGI3Q5TCQ9 1506 aa13.55□□□□□ -0.24
CLRN1-201ENST00000295911 CARMIL2Q6F5E8 1435 aa13.55□□□□□ -0.24
CLRN1-201ENST00000295911 DIEXFQ68CQ4 756 aaKnown RBP13.55□□□□□ -0.24
CLRN1-201ENST00000295911 MIA2Q96PC5 1412 aa13.52□□□□□ -0.24
CLRN1-201ENST00000295911 CDK11AQ9UQ88 783 aaPredicted RBP13.52□□□□□ -0.25
CLRN1-201ENST00000295911 TCOF1Q13428 1488 aaKnown RBP13.52□□□□□ -0.25
CLRN1-201ENST00000295911 CDK13Q14004 1512 aaKnown RBP13.52□□□□□ -0.25
CLRN1-201ENST00000295911 NUP153P49790 1475 aaKnown RBP13.5□□□□□ -0.25
CLRN1-201ENST00000295911 JPH4Q96JJ6 628 aa13.49□□□□□ -0.25
CLRN1-201ENST00000295911 HFM1A2PYH4 1435 aa13.49□□□□□ -0.25
CLRN1-201ENST00000295911 MAPKBP1O60336 1514 aa13.49□□□□□ -0.25
CLRN1-201ENST00000295911 GCC2Q8IWJ2 1684 aa13.46□□□□□ -0.25
CLRN1-201ENST00000295911 CHD1O14646 1710 aa13.46□□□□□ -0.25
CLRN1-201ENST00000295911 ACIN1Q9UKV3 1341 aaKnown RBP13.46□□□□□ -0.26
CLRN1-201ENST00000295911 TIMELESSQ9UNS1 1208 aa13.46□□□□□ -0.26
CLRN1-201ENST00000295911 ITSN2Q9NZM3 1697 aa13.45□□□□□ -0.26
CLRN1-201ENST00000295911 ADCY10Q96PN6 1610 aa13.45□□□□□ -0.26
CLRN1-201ENST00000295911 AKNAQ7Z591 1439 aa13.44□□□□□ -0.26
CLRN1-201ENST00000295911 PTPRKQ15262 1439 aa13.43□□□□□ -0.26
CLRN1-201ENST00000295911 TROQ12816 1431 aaPredicted RBP13.43□□□□□ -0.26
CLRN1-201ENST00000295911 NAIPQ13075 1403 aa13.43□□□□□ -0.26
CLRN1-201ENST00000295911 ABCA8O94911 1581 aa13.42□□□□□ -0.26
CLRN1-201ENST00000295911 PRKAR2AP13861 404 aaKnown RBP13.42□□□□□ -0.26
CLRN1-201ENST00000295911 UACAQ9BZF9 1416 aa13.42□□□□□ -0.26
CLRN1-201ENST00000295911 PLB1Q6P1J6 1458 aa13.41□□□□□ -0.26
CLRN1-201ENST00000295911 DNMT1P26358 1616 aaKnown RBP13.39□□□□□ -0.27
CLRN1-201ENST00000295911 HAX1O00165 279 aa13.39□□□□□ -0.27
CLRN1-201ENST00000295911 SHROOM2Q13796 1616 aa13.39□□□□□ -0.27
CLRN1-201ENST00000295911 ARID3CA6NKF2 412 aa13.38□□□□□ -0.27
CLRN1-201ENST00000295911 SPDYE4A6NLX3 237 aa13.37□□□□□ -0.27
CLRN1-201ENST00000295911 PRR29P0C7W0 189 aa13.37□□□□□ -0.27
CLRN1-201ENST00000295911 ROCK1Q13464 1354 aa13.37□□□□□ -0.27
CLRN1-201ENST00000295911 PRG4Q92954 1404 aaPredicted RBP13.36□□□□□ -0.27
CLRN1-201ENST00000295911 KIF14Q15058 1648 aa13.35□□□□□ -0.27
CLRN1-201ENST00000295911 DAPK1P53355 1430 aa13.35□□□□□ -0.27
CLRN1-201ENST00000295911 ADGBQ8N7X0 1667 aa13.34□□□□□ -0.27
CLRN1-201ENST00000295911 PLEKHD1A6NEE1 506 aa13.34□□□□□ -0.27
CLRN1-201ENST00000295911 CHADLQ6NUI6 762 aa13.34□□□□□ -0.27
CLRN1-201ENST00000295911 SP7Q8TDD2 431 aaPredicted RBP13.34□□□□□ -0.27
CLRN1-201ENST00000295911 PTPRGP23470 1445 aa13.34□□□□□ -0.27
CLRN1-201ENST00000295911 CDC42BPAQ5VT25 1732 aa13.33□□□□□ -0.28
CLRN1-201ENST00000295911 ATP10BO94823 1461 aa13.33□□□□□ -0.28
CLRN1-201ENST00000295911 GPATCH8Q9UKJ3 1502 aaKnown RBP13.32□□□□□ -0.28
CLRN1-201ENST00000295911 CROCC2H7BZ55 1655 aa13.32□□□□□ -0.28
CLRN1-201ENST00000295911 NEUROD1Q13562 356 aa13.31□□□□□ -0.28
CLRN1-201ENST00000295911 SIN3AQ96ST3 1273 aa13.31□□□□□ -0.28
CLRN1-201ENST00000295911 ABCC5O15440 1437 aa13.31□□□□□ -0.28
CLRN1-201ENST00000295911 EVX2Q03828 476 aa13.3□□□□□ -0.28
CLRN1-201ENST00000295911 RRP7BPQ9NSQ0 103 aa13.3□□□□□ -0.28
CLRN1-201ENST00000295911 CFDP1Q9UEE9 299 aaPredicted RBP13.3□□□□□ -0.28
CLRN1-201ENST00000295911 CHIC2Q9UKJ5 165 aa13.3□□□□□ -0.28
CLRN1-201ENST00000295911 CAMSAP2Q08AD1 1489 aa13.3□□□□□ -0.28
CLRN1-201ENST00000295911 ABCC10Q5T3U5 1492 aa13.27□□□□□ -0.28
CLRN1-201ENST00000295911 PPP1R15AO75807 674 aaPredicted RBP13.27□□□□□ -0.29
CLRN1-201ENST00000295911 CENPBP07199 599 aaPredicted RBP13.27□□□□□ -0.29
CLRN1-201ENST00000295911 KDM6BO15054 1643 aa13.27□□□□□ -0.29
CLRN1-201ENST00000295911 TONSLQ96HA7 1378 aa13.27□□□□□ -0.29
CLRN1-201ENST00000295911 ADGRL2O95490 1459 aa13.26□□□□□ -0.29
CLRN1-201ENST00000295911 CLASP1Q7Z460 1538 aa13.26□□□□□ -0.29
CLRN1-201ENST00000295911 TRIM52Q96A61 297 aa13.25□□□□□ -0.29
CLRN1-201ENST00000295911 ZNF644Q9H582 1327 aaPredicted RBP13.25□□□□□ -0.29
CLRN1-201ENST00000295911 MIER1Q8N108 512 aa13.24□□□□□ -0.29
CLRN1-201ENST00000295911 ABCC2Q92887 1545 aa13.23□□□□□ -0.29
CLRN1-201ENST00000295911 SHANK2Q9UPX8 1470 aa13.23□□□□□ -0.29
CLRN1-201ENST00000295911 MPHOSPH9Q99550 1183 aa13.22□□□□□ -0.29
CLRN1-201ENST00000295911 CDC42BPBQ9Y5S2 1711 aa13.22□□□□□ -0.29
CLRN1-201ENST00000295911 PREX2Q70Z35 1606 aa13.22□□□□□ -0.29
CLRN1-201ENST00000295911 ARHGEF5Q12774 1597 aa13.22□□□□□ -0.29
CLRN1-201ENST00000295911 NCOA1Q15788 1441 aa13.22□□□□□ -0.29
CLRN1-201ENST00000295911 ANKRD30AQ9BXX3 1397 aa13.22□□□□□ -0.29
CLRN1-201ENST00000295911 ZNF777Q9ULD5 760 aaPredicted RBP13.2□□□□□ -0.3
CLRN1-201ENST00000295911 DENND4BO75064 1496 aaPredicted RBP13.19□□□□□ -0.3
CLRN1-201ENST00000295911 MYO5CQ9NQX4 1742 aa13.19□□□□□ -0.3
CLRN1-201ENST00000295911 C19orf67A6NJJ6 358 aa13.19□□□□□ -0.3
CLRN1-201ENST00000295911 RSPH4AQ5TD94 716 aa13.19□□□□□ -0.3
CLRN1-201ENST00000295911 UHRF1BP1LA0JNW5 1464 aa13.19□□□□□ -0.3
CLRN1-201ENST00000295911 ERCC6L2Q5T890 1561 aa13.18□□□□□ -0.3
CLRN1-201ENST00000295911 TSPY4P0CV99 314 aa13.16□□□□□ -0.3
CLRN1-201ENST00000295911 TSPY10P0CW01 314 aa13.16□□□□□ -0.3
CLRN1-201ENST00000295911 STAG3Q9UJ98 1225 aa13.16□□□□□ -0.3
CLRN1-201ENST00000295911 ZCCHC11Q5TAX3 1644 aaKnown RBP13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms