RNA–Protein interactions for RNA: ENST00000295628.3

LRRC58-201, Transcript of leucine rich repeat containing 58, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRRC58, Length 7,903 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC58-201ENST00000295628 USP35Q9P2H5 1018 aa21.16■□□□□ 0.98
LRRC58-201ENST00000295628 SLKQ9H2G2 1235 aaPredicted RBP21.16■□□□□ 0.98
LRRC58-201ENST00000295628 KRI1Q8N9T8 703 aaKnown RBP21.15■□□□□ 0.98
LRRC58-201ENST00000295628 HTATSF1O43719 755 aaKnown RBP21.14■□□□□ 0.98
LRRC58-201ENST00000295628 PES1O00541 588 aaKnown RBP21.14■□□□□ 0.97
LRRC58-201ENST00000295628 VPS53Q5VIR6 699 aa21.14■□□□□ 0.97
LRRC58-201ENST00000295628 ZNF330Q9Y3S2 320 aaPredicted RBP21.13■□□□□ 0.97
LRRC58-201ENST00000295628 TPM3P06753 285 aa21.11■□□□□ 0.97
LRRC58-201ENST00000295628 CCAR2Q8N163 923 aaKnown RBP21.1■□□□□ 0.97
LRRC58-201ENST00000295628 CFAP44Q96MT7 982 aa21.09■□□□□ 0.97
LRRC58-201ENST00000295628 RTF1Q92541 710 aaKnown RBP21.08■□□□□ 0.96
LRRC58-201ENST00000295628 GOLGA6L3A6NEY3 463 aa21.08■□□□□ 0.96
LRRC58-201ENST00000295628 FOXD4L1Q9NU39 408 aa21.07■□□□□ 0.96
LRRC58-201ENST00000295628 NOL8Q76FK4 1167 aaKnown RBP21.06■□□□□ 0.96
LRRC58-201ENST00000295628 CHMP3Q9Y3E7 222 aa21.06■□□□□ 0.96
LRRC58-201ENST00000295628 TAF7LQ5H9L4 462 aa21.06■□□□□ 0.96
LRRC58-201ENST00000295628 TMX4Q9H1E5 349 aaPredicted RBP21.06■□□□□ 0.96
LRRC58-201ENST00000295628 HSP90AA2PQ14568 343 aaPredicted RBP21.06■□□□□ 0.96
LRRC58-201ENST00000295628 CCDC34Q96HJ3 373 aa21.04■□□□□ 0.96
LRRC58-201ENST00000295628 TRIM6-TRIM34B2RNG4 842 aa21.04■□□□□ 0.96
LRRC58-201ENST00000295628 GORABQ5T7V8 394 aa21.03■□□□□ 0.96
LRRC58-201ENST00000295628 TPD52L1Q16890 204 aaPredicted RBP21.03■□□□□ 0.96
LRRC58-201ENST00000295628 FOXD4L5Q5VV16 416 aaPredicted RBP21.02■□□□□ 0.96
LRRC58-201ENST00000295628 ZNF771Q7L3S4 317 aaPredicted RBP21.02■□□□□ 0.96
LRRC58-201ENST00000295628 FOXD4L4Q8WXT5 416 aaPredicted RBP21.02■□□□□ 0.96
LRRC58-201ENST00000295628 RRP12Q5JTH9 1297 aaKnown RBP21.01■□□□□ 0.95
LRRC58-201ENST00000295628 G3V3G9 751 aa21■□□□□ 0.95
LRRC58-201ENST00000295628 DCAF8Q5TAQ9 597 aa21■□□□□ 0.95
LRRC58-201ENST00000295628 MARCH6O60337 910 aa21■□□□□ 0.95
LRRC58-201ENST00000295628 CSPP1Q1MSJ5 1256 aa21■□□□□ 0.95
LRRC58-201ENST00000295628 DCAF1Q9Y4B6 1507 aa20.99■□□□□ 0.95
LRRC58-201ENST00000295628 MFAP1P55081 439 aaKnown RBP20.99■□□□□ 0.95
LRRC58-201ENST00000295628 CALD1Q05682 793 aaKnown RBP20.99■□□□□ 0.95
LRRC58-201ENST00000295628 CHMP7Q8WUX9 453 aaPredicted RBP20.99■□□□□ 0.95
LRRC58-201ENST00000295628 ITPRIPQ8IWB1 547 aa20.99■□□□□ 0.95
LRRC58-201ENST00000295628 RBM19Q9Y4C8 960 aaKnown RBP20.98■□□□□ 0.95
LRRC58-201ENST00000295628 TSR1Q2NL82 804 aaKnown RBP20.97■□□□□ 0.95
LRRC58-201ENST00000295628 GPATCH3Q96I76 525 aa20.97■□□□□ 0.95
LRRC58-201ENST00000295628 PHF14O94880 888 aa20.96■□□□□ 0.95
LRRC58-201ENST00000295628 SRPK2P78362 688 aaKnown RBP20.95■□□□□ 0.94
LRRC58-201ENST00000295628 SAFB2Q14151 953 aaKnown RBP eCLIP20.93■□□□□ 0.94
LRRC58-201ENST00000295628 CCDC70Q6NSX1 233 aa20.92■□□□□ 0.94
LRRC58-201ENST00000295628 ZNF592Q92610 1267 aa20.92■□□□□ 0.94
LRRC58-201ENST00000295628 SF3A1Q15459 793 aaKnown RBP20.92■□□□□ 0.94
LRRC58-201ENST00000295628 VSIG10Q8N0Z9 540 aa20.91■□□□□ 0.94
LRRC58-201ENST00000295628 CNKSR2Q8WXI2 1034 aa20.91■□□□□ 0.94
LRRC58-201ENST00000295628 TOMM22Q9NS69 142 aa20.9■□□□□ 0.94
LRRC58-201ENST00000295628 PAK3O75914 559 aaPredicted RBP20.9■□□□□ 0.94
LRRC58-201ENST00000295628 GPS2Q13227 327 aa20.9■□□□□ 0.94
LRRC58-201ENST00000295628 MORC1Q86VD1 984 aa20.89■□□□□ 0.93
LRRC58-201ENST00000295628 IPO8O15397 1037 aaKnown RBP20.89■□□□□ 0.93
LRRC58-201ENST00000295628 TPM2P07951 284 aa20.87■□□□□ 0.93
LRRC58-201ENST00000295628 FOXD4L6Q3SYB3 417 aaPredicted RBP20.87■□□□□ 0.93
LRRC58-201ENST00000295628 FOXD4L3Q6VB84 417 aaPredicted RBP20.87■□□□□ 0.93
LRRC58-201ENST00000295628 GOLGA6L19H0YKK7 550 aa20.86■□□□□ 0.93
LRRC58-201ENST00000295628 H3BQV1 296 aa20.86■□□□□ 0.93
LRRC58-201ENST00000295628 IFFO2Q5TF58 517 aa20.86■□□□□ 0.93
LRRC58-201ENST00000295628 KIF16BQ96L93 1317 aa20.85■□□□□ 0.93
LRRC58-201ENST00000295628 PCMTD1Q96MG8 357 aaPredicted RBP20.85■□□□□ 0.93
LRRC58-201ENST00000295628 TMF1P82094 1093 aa20.84■□□□□ 0.93
LRRC58-201ENST00000295628 FRAT2O75474 233 aaPredicted RBP20.84■□□□□ 0.93
LRRC58-201ENST00000295628 SCRIBQ14160 1630 aa20.83■□□□□ 0.93
LRRC58-201ENST00000295628 CCDC9Q9Y3X0 531 aaKnown RBP20.83■□□□□ 0.93
LRRC58-201ENST00000295628 TCEAL9Q9UHQ7 104 aa20.83■□□□□ 0.93
LRRC58-201ENST00000295628 TPM1P09493 284 aa20.82■□□□□ 0.92
LRRC58-201ENST00000295628 CSB-PGBD3P0DP91 1061 aa20.82■□□□□ 0.92
LRRC58-201ENST00000295628 RWDD1Q9H446 243 aaPredicted RBP20.82■□□□□ 0.92
LRRC58-201ENST00000295628 PLEKHD1A6NEE1 506 aa20.82■□□□□ 0.92
LRRC58-201ENST00000295628 ZCCHC6Q5VYS8 1495 aaKnown RBP20.81■□□□□ 0.92
LRRC58-201ENST00000295628 TEX35Q5T0J7 233 aa20.8■□□□□ 0.92
LRRC58-201ENST00000295628 MAP7D2Q96T17 732 aa20.79■□□□□ 0.92
LRRC58-201ENST00000295628 RSF1Q96T23 1441 aaPredicted RBP20.79■□□□□ 0.92
LRRC58-201ENST00000295628 SLC4A10Q6U841 1118 aa20.79■□□□□ 0.92
LRRC58-201ENST00000295628 BCL11BQ9C0K0 894 aaPredicted RBP20.79■□□□□ 0.92
LRRC58-201ENST00000295628 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP20.79■□□□□ 0.92
LRRC58-201ENST00000295628 RAD21O60216 631 aa20.78■□□□□ 0.92
LRRC58-201ENST00000295628 UTP3Q9NQZ2 479 aaKnown RBP eCLIP20.77■□□□□ 0.92
LRRC58-201ENST00000295628 STK26Q9P289 416 aa20.77■□□□□ 0.92
LRRC58-201ENST00000295628 DCAF11Q8TEB1 546 aa20.76■□□□□ 0.91
LRRC58-201ENST00000295628 CFDP1Q9UEE9 299 aaPredicted RBP20.76■□□□□ 0.91
LRRC58-201ENST00000295628 RSPH6AQ9H0K4 717 aa20.76■□□□□ 0.91
LRRC58-201ENST00000295628 ST18O60284 1047 aa20.75■□□□□ 0.91
LRRC58-201ENST00000295628 BECN2A8MW95 431 aa20.75■□□□□ 0.91
LRRC58-201ENST00000295628 TCERG1O14776 1098 aaKnown RBP20.75■□□□□ 0.91
LRRC58-201ENST00000295628 PMFBP1Q8TBY8 1022 aa20.75■□□□□ 0.91
LRRC58-201ENST00000295628 SIN3AQ96ST3 1273 aa20.75■□□□□ 0.91
LRRC58-201ENST00000295628 FAM184AQ8NB25 1140 aa20.74■□□□□ 0.91
LRRC58-201ENST00000295628 MLECQ14165 292 aa20.74■□□□□ 0.91
LRRC58-201ENST00000295628 TIMELESSQ9UNS1 1208 aa20.74■□□□□ 0.91
LRRC58-201ENST00000295628 CLIP1P30622 1438 aa20.73■□□□□ 0.91
LRRC58-201ENST00000295628 RCAN3Q9UKA8 241 aa20.73■□□□□ 0.91
LRRC58-201ENST00000295628 RUFY1Q96T51 708 aa20.73■□□□□ 0.91
LRRC58-201ENST00000295628 MCTP1Q6DN14 999 aa20.73■□□□□ 0.91
LRRC58-201ENST00000295628 AKAP17AQ02040 695 aaKnown RBP20.72■□□□□ 0.91
LRRC58-201ENST00000295628 STK31Q9BXU1 1019 aa20.71■□□□□ 0.91
LRRC58-201ENST00000295628 SPAG9O60271 1321 aaKnown RBP20.7■□□□□ 0.91
LRRC58-201ENST00000295628 HOMER1Q86YM7 354 aa20.7■□□□□ 0.9
LRRC58-201ENST00000295628 SMC4Q9NTJ3 1288 aa20.7■□□□□ 0.9
LRRC58-201ENST00000295628 KIF3AQ9Y496 699 aa20.7■□□□□ 0.9
LRRC58-201ENST00000295628 CCDC180Q9P1Z9 1646 aa20.7■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms