RNA–Protein interactions for RNA: ENST00000295317.3

RNF149-201, Transcript of ring finger protein 149, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF149, Length 2,458 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF149-201ENST00000295317 DENND4BO75064 1496 aaPredicted RBP30.92■■■□□ 2.54
RNF149-201ENST00000295317 DDX10Q13206 875 aaKnown RBP30.9■■■□□ 2.54
RNF149-201ENST00000295317 TIMELESSQ9UNS1 1208 aa30.9■■■□□ 2.54
RNF149-201ENST00000295317 GCC2Q8IWJ2 1684 aa30.88■■■□□ 2.53
RNF149-201ENST00000295317 MPHOSPH9Q99550 1183 aa30.87■■■□□ 2.53
RNF149-201ENST00000295317 GPATCH8Q9UKJ3 1502 aaKnown RBP30.84■■■□□ 2.53
RNF149-201ENST00000295317 PLEKHD1A6NEE1 506 aa30.83■■■□□ 2.53
RNF149-201ENST00000295317 KCNH8Q96L42 1107 aa30.82■■■□□ 2.52
RNF149-201ENST00000295317 ATP10BO94823 1461 aa30.82■■■□□ 2.52
RNF149-201ENST00000295317 CAMSAP2Q08AD1 1489 aa30.81■■■□□ 2.52
RNF149-201ENST00000295317 AKNAQ7Z591 1439 aa30.8■■■□□ 2.52
RNF149-201ENST00000295317 DNMT1P26358 1616 aaKnown RBP30.8■■■□□ 2.52
RNF149-201ENST00000295317 ABCA8O94911 1581 aa30.79■■■□□ 2.52
RNF149-201ENST00000295317 CHD1O14646 1710 aa30.78■■■□□ 2.52
RNF149-201ENST00000295317 PTPRGP23470 1445 aa30.78■■■□□ 2.52
RNF149-201ENST00000295317 ROCK1Q13464 1354 aa30.72■■■□□ 2.51
RNF149-201ENST00000295317 KDM5BQ9UGL1 1544 aa30.72■■■□□ 2.51
RNF149-201ENST00000295317 SLC4A1APQ9BWU0 796 aaKnown RBP30.7■■■□□ 2.5
RNF149-201ENST00000295317 ERCC6L2Q5T890 1561 aa30.66■■■□□ 2.5
RNF149-201ENST00000295317 ADCY10Q96PN6 1610 aa30.65■■■□□ 2.5
RNF149-201ENST00000295317 L3MBTL2Q969R5 705 aa30.65■■■□□ 2.5
RNF149-201ENST00000295317 NCOA1Q15788 1441 aa30.65■■■□□ 2.5
RNF149-201ENST00000295317 ITSN2Q9NZM3 1697 aa30.64■■■□□ 2.5
RNF149-201ENST00000295317 HNRNPMP52272 730 aaKnown RBP eCLIP30.63■■■□□ 2.49
RNF149-201ENST00000295317 ABCC10Q5T3U5 1492 aa30.62■■■□□ 2.49
RNF149-201ENST00000295317 CDC42BPAQ5VT25 1732 aa30.6■■■□□ 2.49
RNF149-201ENST00000295317 ANKRD30BQ9BXX2 1392 aa30.58■■■□□ 2.49
RNF149-201ENST00000295317 PZPP20742 1482 aa30.51■■■□□ 2.48
RNF149-201ENST00000295317 ANKRD30AQ9BXX3 1397 aa30.51■■■□□ 2.47
RNF149-201ENST00000295317 HSPA5P11021 654 aaKnown RBP30.51■■■□□ 2.47
RNF149-201ENST00000295317 NBPF8Q3BBV2 869 aa30.49■■■□□ 2.47
RNF149-201ENST00000295317 C9orf84Q5VXU9 1444 aa30.47■■■□□ 2.47
RNF149-201ENST00000295317 PKD2Q13563 968 aa30.47■■■□□ 2.47
RNF149-201ENST00000295317 CROCC2H7BZ55 1655 aa30.47■■■□□ 2.47
RNF149-201ENST00000295317 ANKRD50Q9ULJ7 1429 aa30.47■■■□□ 2.47
RNF149-201ENST00000295317 TSPY4P0CV99 314 aa30.46■■■□□ 2.47
RNF149-201ENST00000295317 TSPY10P0CW01 314 aa30.46■■■□□ 2.47
RNF149-201ENST00000295317 ADGBQ8N7X0 1667 aa30.45■■■□□ 2.47
RNF149-201ENST00000295317 ADGRL2O95490 1459 aa30.45■■■□□ 2.46
RNF149-201ENST00000295317 SHROOM2Q13796 1616 aa30.44■■■□□ 2.46
RNF149-201ENST00000295317 RPRD2Q5VT52 1461 aaKnown RBP30.44■■■□□ 2.46
RNF149-201ENST00000295317 NUP155O75694 1391 aa30.39■■■□□ 2.45
RNF149-201ENST00000295317 WASHC2AQ641Q2 1341 aa30.38■■■□□ 2.45
RNF149-201ENST00000295317 ZNF326Q5BKZ1 582 aaKnown RBP30.37■■■□□ 2.45
RNF149-201ENST00000295317 MBD5Q9P267 1494 aa30.37■■■□□ 2.45
RNF149-201ENST00000295317 ANP32CO43423 234 aa30.37■■■□□ 2.45
RNF149-201ENST00000295317 EIF4G2P78344 907 aaKnown RBP eCLIP30.37■■■□□ 2.45
RNF149-201ENST00000295317 TEX14Q8IWB6 1497 aa30.37■■■□□ 2.45
RNF149-201ENST00000295317 CDC42BPBQ9Y5S2 1711 aa30.36■■■□□ 2.45
RNF149-201ENST00000295317 KIF15Q9NS87 1388 aa30.36■■■□□ 2.45
RNF149-201ENST00000295317 C11orf95C9JLR9 678 aaPredicted RBP30.35■■■□□ 2.45
RNF149-201ENST00000295317 TTC37Q6PGP7 1564 aa30.35■■■□□ 2.45
RNF149-201ENST00000295317 SAMD9LQ8IVG5 1584 aa30.35■■■□□ 2.45
RNF149-201ENST00000295317 KIAA1107Q9UPP5 1409 aa30.32■■■□□ 2.44
RNF149-201ENST00000295317 ABCC2Q92887 1545 aa30.31■■■□□ 2.44
RNF149-201ENST00000295317 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP30.3■■■□□ 2.44
RNF149-201ENST00000295317 ARHGAP5Q13017 1502 aa30.29■■■□□ 2.44
RNF149-201ENST00000295317 SHANK2Q9UPX8 1470 aa30.28■■■□□ 2.44
RNF149-201ENST00000295317 PREX2Q70Z35 1606 aa30.28■■■□□ 2.44
RNF149-201ENST00000295317 SYCP2Q9BX26 1530 aa30.27■■■□□ 2.44
RNF149-201ENST00000295317 CLASP1Q7Z460 1538 aa30.25■■■□□ 2.43
RNF149-201ENST00000295317 CCDC141Q6ZP82 1450 aa30.24■■■□□ 2.43
RNF149-201ENST00000295317 GRWD1Q9BQ67 446 aaKnown RBP eCLIP30.22■■■□□ 2.431e-7■□□□□ 10.2
RNF149-201ENST00000295317 ARHGEF5Q12774 1597 aa30.21■■■□□ 2.43
RNF149-201ENST00000295317 KDM2AQ9Y2K7 1162 aa30.17■■■□□ 2.42
RNF149-201ENST00000295317 ZCCHC11Q5TAX3 1644 aaKnown RBP30.15■■■□□ 2.42
RNF149-201ENST00000295317 CCER2I3L3R5 266 aa30.15■■■□□ 2.42
RNF149-201ENST00000295317 ARHGEF12Q9NZN5 1544 aa30.14■■■□□ 2.42
RNF149-201ENST00000295317 CCDC7Q96M83 1385 aa30.11■■■□□ 2.41
RNF149-201ENST00000295317 RSPH4AQ5TD94 716 aa30.1■■■□□ 2.41
RNF149-201ENST00000295317 POLR3GLQ9BT43 218 aa30.1■■■□□ 2.41
RNF149-201ENST00000295317 MYO5CQ9NQX4 1742 aa30.09■■■□□ 2.41
RNF149-201ENST00000295317 CNGB1Q14028 1251 aaPredicted RBP30.08■■■□□ 2.41
RNF149-201ENST00000295317 SPATA31E1Q6ZUB1 1445 aa30.08■■■□□ 2.41
RNF149-201ENST00000295317 KIF7Q2M1P5 1343 aa30.07■■■□□ 2.4
RNF149-201ENST00000295317 DCAF11Q8TEB1 546 aa30.05■■■□□ 2.4
RNF149-201ENST00000295317 PLEKHH2Q8IVE3 1493 aa30.05■■■□□ 2.4
RNF149-201ENST00000295317 CCDC184Q52MB2 194 aa30.05■■■□□ 2.4
RNF149-201ENST00000295317 FAM135AQ9P2D6 1515 aa30.04■■■□□ 2.4
RNF149-201ENST00000295317 EFCAB2Q5VUJ9 269 aa30.04■■■□□ 2.4
RNF149-201ENST00000295317 PLCH2O75038 1416 aa30.03■■■□□ 2.4
RNF149-201ENST00000295317 RGL3Q3MIN7 710 aa30.03■■■□□ 2.4
RNF149-201ENST00000295317 KDM5DQ9BY66 1539 aa30.02■■■□□ 2.4
RNF149-201ENST00000295317 AFAP1Q8N556 730 aa30.02■■■□□ 2.4
RNF149-201ENST00000295317 SUPT16HQ9Y5B9 1047 aaKnown RBP30.02■■■□□ 2.4
RNF149-201ENST00000295317 TRAPPC8Q9Y2L5 1435 aa30.02■■■□□ 2.4
RNF149-201ENST00000295317 CNTLNQ9NXG0 1405 aa30.01■■■□□ 2.39
RNF149-201ENST00000295317 UHRF1BP1LA0JNW5 1464 aa30.01■■■□□ 2.39
RNF149-201ENST00000295317 USP47Q96K76 1375 aa30■■■□□ 2.39
RNF149-201ENST00000295317 CARD11Q9BXL7 1154 aa29.95■■■□□ 2.38
RNF149-201ENST00000295317 MAST1Q9Y2H9 1570 aa29.91■■■□□ 2.38
RNF149-201ENST00000295317 PRKRIP1Q9H875 184 aaPredicted RBP29.9■■■□□ 2.38
RNF149-201ENST00000295317 PLA2R1Q13018 1463 aa29.9■■■□□ 2.38
RNF149-201ENST00000295317 BCORL1Q5H9F3 1711 aa29.9■■■□□ 2.38
RNF149-201ENST00000295317 CCDC144AA2RUR9 1427 aa29.88■■■□□ 2.37
RNF149-201ENST00000295317 HNRNPUQ00839 825 aaKnown RBP eCLIP29.88■■■□□ 2.37
RNF149-201ENST00000295317 ABCC1P33527 1531 aa29.87■■■□□ 2.37
RNF149-201ENST00000295317 SPAG9O60271 1321 aaKnown RBP29.87■■■□□ 2.37
RNF149-201ENST00000295317 BCANQ96GW7 911 aa29.85■■■□□ 2.37
RNF149-201ENST00000295317 UHRF1BP1Q6BDS2 1440 aa29.85■■■□□ 2.37
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms