RNA–Protein interactions for RNA: ENST00000294172.6

NXF1-201, Transcript of nuclear RNA export factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NXF1, Length 2,346 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-201ENST00000294172 ABCA8O94911 1581 aa20.07■□□□□ 0.8
NXF1-201ENST00000294172 KIF14Q15058 1648 aa20.07■□□□□ 0.8
NXF1-201ENST00000294172 PTPRGP23470 1445 aa20.06■□□□□ 0.8
NXF1-201ENST00000294172 GPATCH8Q9UKJ3 1502 aaKnown RBP20.05■□□□□ 0.8
NXF1-201ENST00000294172 ATP10BO94823 1461 aa20.05■□□□□ 0.8
NXF1-201ENST00000294172 DNMT1P26358 1616 aaKnown RBP20.05■□□□□ 0.8
NXF1-201ENST00000294172 ROCK1Q13464 1354 aa20.05■□□□□ 0.8
NXF1-201ENST00000294172 CHD1O14646 1710 aa20.04■□□□□ 0.8
NXF1-201ENST00000294172 MPHOSPH9Q99550 1183 aa20.03■□□□□ 0.8
NXF1-201ENST00000294172 CAMSAP2Q08AD1 1489 aa20.03■□□□□ 0.8
NXF1-201ENST00000294172 ADCY10Q96PN6 1610 aa20.01■□□□□ 0.79
NXF1-201ENST00000294172 HIRIP3Q9BW71 556 aaPredicted RBP20.01■□□□□ 0.79
NXF1-201ENST00000294172 ITSN2Q9NZM3 1697 aa20■□□□□ 0.79
NXF1-201ENST00000294172 DENND4BO75064 1496 aaPredicted RBP19.99■□□□□ 0.79
NXF1-201ENST00000294172 FOXD1Q16676 465 aa19.99■□□□□ 0.79
NXF1-201ENST00000294172 DDX10Q13206 875 aaKnown RBP19.94■□□□□ 0.78
NXF1-201ENST00000294172 ABCC10Q5T3U5 1492 aa19.93■□□□□ 0.78
NXF1-201ENST00000294172 SLC4A1APQ9BWU0 796 aaKnown RBP19.92■□□□□ 0.78
NXF1-201ENST00000294172 GTF3C3Q9Y5Q9 886 aa19.92■□□□□ 0.78
NXF1-201ENST00000294172 NCOA1Q15788 1441 aa19.92■□□□□ 0.78
NXF1-201ENST00000294172 CDC42BPAQ5VT25 1732 aa19.9■□□□□ 0.78
NXF1-201ENST00000294172 SHROOM2Q13796 1616 aa19.89■□□□□ 0.77
NXF1-201ENST00000294172 ANKRD30AQ9BXX3 1397 aa19.88■□□□□ 0.77
NXF1-201ENST00000294172 ERCC6L2Q5T890 1561 aa19.88■□□□□ 0.77
NXF1-201ENST00000294172 KDM5BQ9UGL1 1544 aa19.87■□□□□ 0.77
NXF1-201ENST00000294172 ADGBQ8N7X0 1667 aa19.85■□□□□ 0.77
NXF1-201ENST00000294172 HNRNPMP52272 730 aaKnown RBP eCLIP19.85■□□□□ 0.772e-7■□□□□ 9.4
NXF1-201ENST00000294172 ADGRL2O95490 1459 aa19.85■□□□□ 0.77
NXF1-201ENST00000294172 ANKRD30BQ9BXX2 1392 aa19.85■□□□□ 0.77
NXF1-201ENST00000294172 TSPY4P0CV99 314 aa19.85■□□□□ 0.77
NXF1-201ENST00000294172 TSPY10P0CW01 314 aa19.85■□□□□ 0.77
NXF1-201ENST00000294172 L3MBTL2Q969R5 705 aa19.84■□□□□ 0.77
NXF1-201ENST00000294172 CROCC2H7BZ55 1655 aa19.84■□□□□ 0.77
NXF1-201ENST00000294172 C9orf84Q5VXU9 1444 aa19.82■□□□□ 0.76
NXF1-201ENST00000294172 ANKRD50Q9ULJ7 1429 aa19.81■□□□□ 0.76
NXF1-201ENST00000294172 PZPP20742 1482 aa19.8■□□□□ 0.76
NXF1-201ENST00000294172 KCNH8Q96L42 1107 aa19.79■□□□□ 0.76
NXF1-201ENST00000294172 ABCC2Q92887 1545 aa19.78■□□□□ 0.76
NXF1-201ENST00000294172 RPRD2Q5VT52 1461 aaKnown RBP19.78■□□□□ 0.76
NXF1-201ENST00000294172 SHANK2Q9UPX8 1470 aa19.78■□□□□ 0.76
NXF1-201ENST00000294172 PKD2Q13563 968 aa19.76■□□□□ 0.75
NXF1-201ENST00000294172 CLASP1Q7Z460 1538 aa19.76■□□□□ 0.75
NXF1-201ENST00000294172 MBD5Q9P267 1494 aa19.74■□□□□ 0.75
NXF1-201ENST00000294172 HSPA5P11021 654 aaKnown RBP19.74■□□□□ 0.75
NXF1-201ENST00000294172 CDC42BPBQ9Y5S2 1711 aa19.74■□□□□ 0.75
NXF1-201ENST00000294172 NUP155O75694 1391 aa19.74■□□□□ 0.75
NXF1-201ENST00000294172 KIF15Q9NS87 1388 aa19.74■□□□□ 0.75
NXF1-201ENST00000294172 SAMD9LQ8IVG5 1584 aa19.73■□□□□ 0.75
NXF1-201ENST00000294172 PREX2Q70Z35 1606 aa19.73■□□□□ 0.75
NXF1-201ENST00000294172 KIAA1107Q9UPP5 1409 aa19.72■□□□□ 0.75
NXF1-201ENST00000294172 TTC37Q6PGP7 1564 aa19.72■□□□□ 0.75
NXF1-201ENST00000294172 ARHGAP5Q13017 1502 aa19.72■□□□□ 0.75
NXF1-201ENST00000294172 ARHGEF5Q12774 1597 aa19.72■□□□□ 0.75
NXF1-201ENST00000294172 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.72■□□□□ 0.75
NXF1-201ENST00000294172 CCDC141Q6ZP82 1450 aa19.71■□□□□ 0.75
NXF1-201ENST00000294172 EIF4G2P78344 907 aaKnown RBP eCLIP19.71■□□□□ 0.75
NXF1-201ENST00000294172 PELP1Q8IZL8 1130 aaKnown RBP19.71■□□□□ 0.75
NXF1-201ENST00000294172 TEX14Q8IWB6 1497 aa19.7■□□□□ 0.74
NXF1-201ENST00000294172 ANP32CO43423 234 aa19.7■□□□□ 0.74
NXF1-201ENST00000294172 NBPF8Q3BBV2 869 aa19.7■□□□□ 0.74
NXF1-201ENST00000294172 RSPH4AQ5TD94 716 aa19.7■□□□□ 0.74
NXF1-201ENST00000294172 SYCP2Q9BX26 1530 aa19.67■□□□□ 0.74
NXF1-201ENST00000294172 ZCCHC11Q5TAX3 1644 aaKnown RBP19.65■□□□□ 0.74
NXF1-201ENST00000294172 WASHC2AQ641Q2 1341 aa19.64■□□□□ 0.73
NXF1-201ENST00000294172 UHRF1BP1LA0JNW5 1464 aa19.64■□□□□ 0.73
NXF1-201ENST00000294172 MYO5CQ9NQX4 1742 aa19.62■□□□□ 0.73
NXF1-201ENST00000294172 ZNF326Q5BKZ1 582 aaKnown RBP19.62■□□□□ 0.73
NXF1-201ENST00000294172 EFCAB2Q5VUJ9 269 aa19.59■□□□□ 0.73
NXF1-201ENST00000294172 PLCH2O75038 1416 aa19.59■□□□□ 0.73
NXF1-201ENST00000294172 PLEKHH2Q8IVE3 1493 aa19.59■□□□□ 0.73
NXF1-201ENST00000294172 CCER2I3L3R5 266 aa19.58■□□□□ 0.73
NXF1-201ENST00000294172 KDM5DQ9BY66 1539 aa19.58■□□□□ 0.73
NXF1-201ENST00000294172 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.58■□□□□ 0.721e-7■■■□□ 16.1
NXF1-201ENST00000294172 C11orf95C9JLR9 678 aaPredicted RBP19.57■□□□□ 0.72
NXF1-201ENST00000294172 ARHGEF12Q9NZN5 1544 aa19.56■□□□□ 0.72
NXF1-201ENST00000294172 MAST1Q9Y2H9 1570 aa19.54■□□□□ 0.72
NXF1-201ENST00000294172 FAM135AQ9P2D6 1515 aa19.53■□□□□ 0.72
NXF1-201ENST00000294172 CCDC7Q96M83 1385 aa19.52■□□□□ 0.71
NXF1-201ENST00000294172 KDM2AQ9Y2K7 1162 aa19.51■□□□□ 0.71
NXF1-201ENST00000294172 SPATA31E1Q6ZUB1 1445 aa19.5■□□□□ 0.71
NXF1-201ENST00000294172 TRAPPC8Q9Y2L5 1435 aa19.48■□□□□ 0.71
NXF1-201ENST00000294172 DCAF11Q8TEB1 546 aa19.48■□□□□ 0.71
NXF1-201ENST00000294172 PLXNC1O60486 1568 aa19.48■□□□□ 0.71
NXF1-201ENST00000294172 CNTLNQ9NXG0 1405 aa19.47■□□□□ 0.71
NXF1-201ENST00000294172 WDR7Q9Y4E6 1490 aa19.47■□□□□ 0.71
NXF1-201ENST00000294172 ABCC1P33527 1531 aa19.47■□□□□ 0.71
NXF1-201ENST00000294172 OSCARQ8IYS5 282 aa19.46■□□□□ 0.71
NXF1-201ENST00000294172 AFAP1Q8N556 730 aa19.46■□□□□ 0.71
NXF1-201ENST00000294172 KIF7Q2M1P5 1343 aa19.46■□□□□ 0.71
NXF1-201ENST00000294172 USP47Q96K76 1375 aa19.46■□□□□ 0.71
NXF1-201ENST00000294172 DUOX2Q9NRD8 1548 aa19.46■□□□□ 0.71
NXF1-201ENST00000294172 SPAG9O60271 1321 aaKnown RBP19.45■□□□□ 0.7
NXF1-201ENST00000294172 CCDC144AA2RUR9 1427 aa19.44■□□□□ 0.7
NXF1-201ENST00000294172 UNC13BO14795 1591 aa19.44■□□□□ 0.7
NXF1-201ENST00000294172 UHRF1BP1Q6BDS2 1440 aa19.43■□□□□ 0.7
NXF1-201ENST00000294172 CARD11Q9BXL7 1154 aa19.43■□□□□ 0.7
NXF1-201ENST00000294172 ERBINQ96RT1 1412 aa19.43■□□□□ 0.7
NXF1-201ENST00000294172 POLR3GLQ9BT43 218 aa19.42■□□□□ 0.7
NXF1-201ENST00000294172 RGL3Q3MIN7 710 aa19.42■□□□□ 0.7
NXF1-201ENST00000294172 RALGAPBQ86X10 1494 aa19.39■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 8 ms