RNA–Protein interactions for RNA: ENST00000292579.11

ZNF250-201, Transcript of zinc finger protein 250, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ZNF250, Length 6,364 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF250-201ENST00000292579 NUP155O75694 1391 aa12.25□□□□□ -0.45
ZNF250-201ENST00000292579 NGDNQ8NEJ9 315 aaKnown RBP12.25□□□□□ -0.45
ZNF250-201ENST00000292579 FRAT1Q92837 279 aaPredicted RBP12.25□□□□□ -0.45
ZNF250-201ENST00000292579 TOP2AP11388 1531 aaKnown RBP12.24□□□□□ -0.45
ZNF250-201ENST00000292579 TPRNQ4KMQ1 711 aa12.24□□□□□ -0.45
ZNF250-201ENST00000292579 RTF1Q92541 710 aaKnown RBP12.23□□□□□ -0.45
ZNF250-201ENST00000292579 PTPRGP23470 1445 aa12.23□□□□□ -0.45
ZNF250-201ENST00000292579 LTV1Q96GA3 475 aaPredicted RBP12.23□□□□□ -0.45
ZNF250-201ENST00000292579 PHF23Q9BUL5 403 aaPredicted RBP12.23□□□□□ -0.45
ZNF250-201ENST00000292579 MIER1Q8N108 512 aa12.21□□□□□ -0.45
ZNF250-201ENST00000292579 FMN1Q68DA7 1419 aa12.21□□□□□ -0.46
ZNF250-201ENST00000292579 ANKRD30AQ9BXX3 1397 aa12.2□□□□□ -0.46
ZNF250-201ENST00000292579 RAPGEF2Q9Y4G8 1499 aa12.19□□□□□ -0.46
ZNF250-201ENST00000292579 ISY1Q9ULR0 285 aaKnown RBP12.19□□□□□ -0.46
ZNF250-201ENST00000292579 SMARCA4P51532 1647 aa12.19□□□□□ -0.46
ZNF250-201ENST00000292579 PNNQ9H307 717 aaKnown RBP12.19□□□□□ -0.46
ZNF250-201ENST00000292579 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.18□□□□□ -0.46
ZNF250-201ENST00000292579 MSH5O43196 834 aa12.18□□□□□ -0.46
ZNF250-201ENST00000292579 EVA1CP58658 441 aa12.17□□□□□ -0.46
ZNF250-201ENST00000292579 ROCK2O75116 1388 aaKnown RBP12.17□□□□□ -0.46
ZNF250-201ENST00000292579 ANP32BQ92688 251 aaKnown RBP12.17□□□□□ -0.46
ZNF250-201ENST00000292579 CDK11BP21127 795 aaKnown RBP12.16□□□□□ -0.46
ZNF250-201ENST00000292579 RAD54L2Q9Y4B4 1467 aa12.16□□□□□ -0.46
ZNF250-201ENST00000292579 TMX4Q9H1E5 349 aaPredicted RBP12.16□□□□□ -0.46
ZNF250-201ENST00000292579 AQRO60306 1485 aaKnown RBP eCLIP12.16□□□□□ -0.465e-7■■■■■ 45.6
ZNF250-201ENST00000292579 MPHOSPH9Q99550 1183 aa12.16□□□□□ -0.46
ZNF250-201ENST00000292579 NAP1L2Q9ULW6 460 aaPredicted RBP12.15□□□□□ -0.46
ZNF250-201ENST00000292579 TRAK1Q9UPV9 953 aa12.15□□□□□ -0.46
ZNF250-201ENST00000292579 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.15□□□□□ -0.46
ZNF250-201ENST00000292579 AMPHP49418 695 aa12.13□□□□□ -0.47
ZNF250-201ENST00000292579 CASC1Q6TDU7 716 aa12.13□□□□□ -0.47
ZNF250-201ENST00000292579 CCDC18Q5T9S5 1454 aa12.12□□□□□ -0.47
ZNF250-201ENST00000292579 SETD5Q9C0A6 1442 aa12.12□□□□□ -0.47
ZNF250-201ENST00000292579 KLHL34Q8N239 644 aa12.12□□□□□ -0.47
ZNF250-201ENST00000292579 G3V3G9 751 aa12.11□□□□□ -0.47
ZNF250-201ENST00000292579 U2AF1L5P0DN76 240 aaPredicted RBP12.11□□□□□ -0.47
ZNF250-201ENST00000292579 U2AF1Q01081 240 aaKnown RBP eCLIP12.11□□□□□ -0.47
ZNF250-201ENST00000292579 DCAF8Q5TAQ9 597 aa12.11□□□□□ -0.47
ZNF250-201ENST00000292579 GAPVD1Q14C86 1478 aa12.11□□□□□ -0.47
ZNF250-201ENST00000292579 CHMP3Q9Y3E7 222 aa12.1□□□□□ -0.47
ZNF250-201ENST00000292579 APBB1O00213 710 aa12.1□□□□□ -0.47
ZNF250-201ENST00000292579 HSPA5P11021 654 aaKnown RBP12.1□□□□□ -0.47
ZNF250-201ENST00000292579 PRDM2Q13029 1718 aa12.1□□□□□ -0.47
ZNF250-201ENST00000292579 FGD1P98174 961 aa12.09□□□□□ -0.47
ZNF250-201ENST00000292579 KCNJ4P48050 445 aa12.09□□□□□ -0.47
ZNF250-201ENST00000292579 VPS8Q8N3P4 1428 aa12.08□□□□□ -0.48
ZNF250-201ENST00000292579 FGD5Q6ZNL6 1462 aa12.08□□□□□ -0.48
ZNF250-201ENST00000292579 SYTL4Q96C24 671 aaPredicted RBP12.07□□□□□ -0.48
ZNF250-201ENST00000292579 RSPH4AQ5TD94 716 aa12.07□□□□□ -0.48
ZNF250-201ENST00000292579 TERF2IPQ9NYB0 399 aa12.07□□□□□ -0.48
ZNF250-201ENST00000292579 GTF2E1P29083 439 aaPredicted RBP12.06□□□□□ -0.48
ZNF250-201ENST00000292579 NESP48681 1621 aa12.06□□□□□ -0.48
ZNF250-201ENST00000292579 EIF3AQ14152 1382 aaKnown RBP12.05□□□□□ -0.48
ZNF250-201ENST00000292579 RGS3P49796 1198 aa12.05□□□□□ -0.48
ZNF250-201ENST00000292579 MINK1Q8N4C8 1332 aaPredicted RBP12.05□□□□□ -0.48
ZNF250-201ENST00000292579 PSME1Q06323 249 aa12.05□□□□□ -0.48
ZNF250-201ENST00000292579 ATF3P18847 181 aa12.04□□□□□ -0.48
ZNF250-201ENST00000292579 NBR1Q14596 966 aa12.04□□□□□ -0.48
ZNF250-201ENST00000292579 CC2D2AQ9P2K1 1620 aa12.03□□□□□ -0.48
ZNF250-201ENST00000292579 TAF7LQ5H9L4 462 aa12.03□□□□□ -0.48
ZNF250-201ENST00000292579 SUPT16HQ9Y5B9 1047 aaKnown RBP12.03□□□□□ -0.48
ZNF250-201ENST00000292579 CLSTN1O94985 981 aa12.03□□□□□ -0.48
ZNF250-201ENST00000292579 NCLP19338 710 aaKnown RBP12.03□□□□□ -0.48
ZNF250-201ENST00000292579 NCBP3Q53F19 620 aaKnown RBP12.02□□□□□ -0.49
ZNF250-201ENST00000292579 PIP4K2BP78356 416 aa12.01□□□□□ -0.49
ZNF250-201ENST00000292579 RAB3GAP2Q9H2M9 1393 aa12.01□□□□□ -0.49
ZNF250-201ENST00000292579 RUSC2Q8N2Y8 1516 aa12.01□□□□□ -0.49
ZNF250-201ENST00000292579 KTN1Q86UP2 1357 aaKnown RBP12.01□□□□□ -0.49
ZNF250-201ENST00000292579 DNAJC5BQ9UF47 199 aa12□□□□□ -0.49
ZNF250-201ENST00000292579 VGFO15240 615 aaPredicted RBP12□□□□□ -0.49
ZNF250-201ENST00000292579 CCDC146Q8IYE0 955 aa12□□□□□ -0.49
ZNF250-201ENST00000292579 NUTM2GQ5VZR2 741 aa12□□□□□ -0.49
ZNF250-201ENST00000292579 NGEFQ8N5V2 710 aa11.99□□□□□ -0.49
ZNF250-201ENST00000292579 ZRSR1Q15695 479 aaKnown RBP11.99□□□□□ -0.49
ZNF250-201ENST00000292579 GORABQ5T7V8 394 aa11.99□□□□□ -0.49
ZNF250-201ENST00000292579 CHMP4BQ9H444 224 aaKnown RBP11.98□□□□□ -0.49
ZNF250-201ENST00000292579 NUTM2BA6NNL0 878 aaPredicted RBP11.98□□□□□ -0.49
ZNF250-201ENST00000292579 NUTM2EB1AL46 878 aaPredicted RBP11.98□□□□□ -0.49
ZNF250-201ENST00000292579 NUTM2AQ8IVF1 878 aaPredicted RBP11.98□□□□□ -0.49
ZNF250-201ENST00000292579 SLC4A10Q6U841 1118 aa11.98□□□□□ -0.49
ZNF250-201ENST00000292579 C1orf141Q5JVX7 400 aa11.97□□□□□ -0.49
ZNF250-201ENST00000292579 FRAT2O75474 233 aaPredicted RBP11.97□□□□□ -0.49
ZNF250-201ENST00000292579 MS4A1P11836 297 aa11.97□□□□□ -0.49
ZNF250-201ENST00000292579 PRG4Q92954 1404 aaPredicted RBP11.97□□□□□ -0.49
ZNF250-201ENST00000292579 COG3Q96JB2 828 aa11.97□□□□□ -0.49
ZNF250-201ENST00000292579 STK31Q9BXU1 1019 aa11.97□□□□□ -0.49
ZNF250-201ENST00000292579 CCDC144AA2RUR9 1427 aa11.97□□□□□ -0.49
ZNF250-201ENST00000292579 L3MBTL2Q969R5 705 aa11.97□□□□□ -0.49
ZNF250-201ENST00000292579 BECN1Q14457 450 aa11.96□□□□□ -0.5
ZNF250-201ENST00000292579 USP35Q9P2H5 1018 aa11.96□□□□□ -0.5
ZNF250-201ENST00000292579 ZNF644Q9H582 1327 aaPredicted RBP11.95□□□□□ -0.5
ZNF250-201ENST00000292579 MRC2Q9UBG0 1479 aa11.95□□□□□ -0.5
ZNF250-201ENST00000292579 AMER1Q5JTC6 1135 aaPredicted RBP11.94□□□□□ -0.5
ZNF250-201ENST00000292579 ITPRIPQ8IWB1 547 aa11.94□□□□□ -0.5
ZNF250-201ENST00000292579 AFAP1Q8N556 730 aa11.94□□□□□ -0.5
ZNF250-201ENST00000292579 CALD1Q05682 793 aaKnown RBP11.93□□□□□ -0.5
ZNF250-201ENST00000292579 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.93□□□□□ -0.5
ZNF250-201ENST00000292579 PROSER2Q86WR7 435 aaPredicted RBP11.93□□□□□ -0.5
ZNF250-201ENST00000292579 B4GALNT3Q6L9W6 998 aa11.92□□□□□ -0.5
ZNF250-201ENST00000292579 ARHGAP5Q13017 1502 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms