RNA–Protein interactions for RNA: ENST00000291300.8

HIF3A-203, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 5

Gene HIF3A, Length 2,101 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-203ENST00000291300 ZNF777Q9ULD5 760 aaPredicted RBP24.54■■□□□ 1.52
HIF3A-203ENST00000291300 GCC2Q8IWJ2 1684 aa24.53■■□□□ 1.52
HIF3A-203ENST00000291300 SIN3AQ96ST3 1273 aa24.53■■□□□ 1.52
HIF3A-203ENST00000291300 AKNAQ7Z591 1439 aa24.48■■□□□ 1.51
HIF3A-203ENST00000291300 ZNF316A6NFI3 1004 aaPredicted RBP24.46■■□□□ 1.51
HIF3A-203ENST00000291300 NEUROD1Q13562 356 aa24.44■■□□□ 1.5
HIF3A-203ENST00000291300 ZCCHC11Q5TAX3 1644 aaKnown RBP24.44■■□□□ 1.5
HIF3A-203ENST00000291300 ROCK1Q13464 1354 aa24.42■■□□□ 1.5
HIF3A-203ENST00000291300 TTC37Q6PGP7 1564 aa24.42■■□□□ 1.5
HIF3A-203ENST00000291300 CDC42BPBQ9Y5S2 1711 aa24.41■■□□□ 1.5
HIF3A-203ENST00000291300 UHRF1BP1LA0JNW5 1464 aa24.41■■□□□ 1.5
HIF3A-203ENST00000291300 CROCC2H7BZ55 1655 aa24.4■■□□□ 1.5
HIF3A-203ENST00000291300 DENND4BO75064 1496 aaPredicted RBP24.4■■□□□ 1.5
HIF3A-203ENST00000291300 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP24.39■■□□□ 1.5
HIF3A-203ENST00000291300 KDM5BQ9UGL1 1544 aa24.38■■□□□ 1.49
HIF3A-203ENST00000291300 OSCARQ8IYS5 282 aa24.37■■□□□ 1.49
HIF3A-203ENST00000291300 KCNH8Q96L42 1107 aa24.37■■□□□ 1.49
HIF3A-203ENST00000291300 PREX2Q70Z35 1606 aa24.37■■□□□ 1.49
HIF3A-203ENST00000291300 TRIM52Q96A61 297 aa24.36■■□□□ 1.49
HIF3A-203ENST00000291300 SAMD9LQ8IVG5 1584 aa24.35■■□□□ 1.49
HIF3A-203ENST00000291300 DIEXFQ68CQ4 756 aaKnown RBP24.35■■□□□ 1.49
HIF3A-203ENST00000291300 NCOA1Q15788 1441 aa24.35■■□□□ 1.49
HIF3A-203ENST00000291300 ADGBQ8N7X0 1667 aa24.34■■□□□ 1.49
HIF3A-203ENST00000291300 HNRNPMP52272 730 aaKnown RBP eCLIP24.34■■□□□ 1.49
HIF3A-203ENST00000291300 ADGRL2O95490 1459 aa24.3■■□□□ 1.48
HIF3A-203ENST00000291300 MBD5Q9P267 1494 aa24.3■■□□□ 1.48
HIF3A-203ENST00000291300 MPHOSPH9Q99550 1183 aa24.28■■□□□ 1.48
HIF3A-203ENST00000291300 ARHGAP5Q13017 1502 aa24.27■■□□□ 1.48
HIF3A-203ENST00000291300 MYO5CQ9NQX4 1742 aa24.27■■□□□ 1.48
HIF3A-203ENST00000291300 FOXD1Q16676 465 aa24.26■■□□□ 1.47
HIF3A-203ENST00000291300 C9orf84Q5VXU9 1444 aa24.26■■□□□ 1.47
HIF3A-203ENST00000291300 ARHGEF5Q12774 1597 aa24.24■■□□□ 1.47
HIF3A-203ENST00000291300 SHANK2Q9UPX8 1470 aa24.24■■□□□ 1.47
HIF3A-203ENST00000291300 ANKRD30AQ9BXX3 1397 aa24.24■■□□□ 1.47
HIF3A-203ENST00000291300 SYCP2Q9BX26 1530 aa24.23■■□□□ 1.47
HIF3A-203ENST00000291300 CCDC141Q6ZP82 1450 aa24.18■■□□□ 1.46
HIF3A-203ENST00000291300 TSPY4P0CV99 314 aa24.18■■□□□ 1.46
HIF3A-203ENST00000291300 TSPY10P0CW01 314 aa24.18■■□□□ 1.46
HIF3A-203ENST00000291300 ARHGEF12Q9NZN5 1544 aa24.18■■□□□ 1.46
HIF3A-203ENST00000291300 PLCH2O75038 1416 aa24.17■■□□□ 1.46
HIF3A-203ENST00000291300 PPP1R15AO75807 674 aaPredicted RBP24.17■■□□□ 1.46
HIF3A-203ENST00000291300 PZPP20742 1482 aa24.17■■□□□ 1.46
HIF3A-203ENST00000291300 ANKRD50Q9ULJ7 1429 aa24.17■■□□□ 1.46
HIF3A-203ENST00000291300 TIMELESSQ9UNS1 1208 aa24.17■■□□□ 1.46
HIF3A-203ENST00000291300 WDR7Q9Y4E6 1490 aa24.16■■□□□ 1.46
HIF3A-203ENST00000291300 TONSLQ96HA7 1378 aa24.15■■□□□ 1.46
HIF3A-203ENST00000291300 SLC4A1APQ9BWU0 796 aaKnown RBP24.13■■□□□ 1.45
HIF3A-203ENST00000291300 KIF15Q9NS87 1388 aa24.13■■□□□ 1.45
HIF3A-203ENST00000291300 ASXL2Q76L83 1435 aa24.1■■□□□ 1.45
HIF3A-203ENST00000291300 ANKRD30BQ9BXX2 1392 aa24.1■■□□□ 1.45
HIF3A-203ENST00000291300 KIAA1107Q9UPP5 1409 aa24.09■■□□□ 1.45
HIF3A-203ENST00000291300 EFCAB2Q5VUJ9 269 aa24.07■■□□□ 1.44
HIF3A-203ENST00000291300 RSPH4AQ5TD94 716 aa24.07■■□□□ 1.44
HIF3A-203ENST00000291300 ABCC1P33527 1531 aa24.06■■□□□ 1.44
HIF3A-203ENST00000291300 MAST1Q9Y2H9 1570 aa24.06■■□□□ 1.44
HIF3A-203ENST00000291300 PLEKHH2Q8IVE3 1493 aa24.05■■□□□ 1.44
HIF3A-203ENST00000291300 TRAPPC8Q9Y2L5 1435 aa24.05■■□□□ 1.44
HIF3A-203ENST00000291300 ABCA9Q8IUA7 1624 aa24.04■■□□□ 1.44
HIF3A-203ENST00000291300 ACIN1Q9UKV3 1341 aaKnown RBP24.02■■□□□ 1.44
HIF3A-203ENST00000291300 NUP155O75694 1391 aa24.02■■□□□ 1.44
HIF3A-203ENST00000291300 PKD2Q13563 968 aa24.01■■□□□ 1.43
HIF3A-203ENST00000291300 MIER1Q8N108 512 aa24.01■■□□□ 1.43
HIF3A-203ENST00000291300 HIRIP3Q9BW71 556 aaPredicted RBP24.01■■□□□ 1.43
HIF3A-203ENST00000291300 ARAP3Q8WWN8 1544 aa23.99■■□□□ 1.43
HIF3A-203ENST00000291300 RPRD2Q5VT52 1461 aaKnown RBP23.99■■□□□ 1.43
HIF3A-203ENST00000291300 L3MBTL2Q969R5 705 aa23.98■■□□□ 1.43
HIF3A-203ENST00000291300 PLXNC1O60486 1568 aa23.97■■□□□ 1.43
HIF3A-203ENST00000291300 AFAP1Q8N556 730 aa23.97■■□□□ 1.43
HIF3A-203ENST00000291300 KDM5DQ9BY66 1539 aa23.97■■□□□ 1.43
HIF3A-203ENST00000291300 FANCAO15360 1455 aa23.97■■□□□ 1.43
HIF3A-203ENST00000291300 NPM1P06748 294 aaKnown RBP eCLIP23.96■■□□□ 1.43
HIF3A-203ENST00000291300 TEX14Q8IWB6 1497 aa23.93■■□□□ 1.42
HIF3A-203ENST00000291300 FAM135AQ9P2D6 1515 aa23.89■■□□□ 1.42
HIF3A-203ENST00000291300 DUOX2Q9NRD8 1548 aa23.88■■□□□ 1.41
HIF3A-203ENST00000291300 UNC13BO14795 1591 aa23.88■■□□□ 1.41
HIF3A-203ENST00000291300 CYB5RLQ6IPT4 315 aa23.88■■□□□ 1.41
HIF3A-203ENST00000291300 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.87■■□□□ 1.41
HIF3A-203ENST00000291300 SPAG9O60271 1321 aaKnown RBP23.87■■□□□ 1.41
HIF3A-203ENST00000291300 ZFYVE16Q7Z3T8 1539 aa23.87■■□□□ 1.41
HIF3A-203ENST00000291300 ADGRL1O94910 1474 aa23.87■■□□□ 1.41
HIF3A-203ENST00000291300 NBPF8Q3BBV2 869 aa23.86■■□□□ 1.41
HIF3A-203ENST00000291300 RIMBP3CA6NJZ7 1639 aa23.86■■□□□ 1.41
HIF3A-203ENST00000291300 RIMBP3BA6NNM3 1639 aa23.86■■□□□ 1.41
HIF3A-203ENST00000291300 RIMBP3Q9UFD9 1639 aa23.86■■□□□ 1.41
HIF3A-203ENST00000291300 SCAPERQ9BY12 1400 aa23.86■■□□□ 1.41
HIF3A-203ENST00000291300 ERBINQ96RT1 1412 aa23.82■■□□□ 1.4
HIF3A-203ENST00000291300 CD109Q6YHK3 1445 aa23.81■■□□□ 1.4
HIF3A-203ENST00000291300 RTEL1-TNFRSF6BF6WH68 1400 aa23.81■■□□□ 1.4
HIF3A-203ENST00000291300 INO80Q9ULG1 1556 aaPredicted RBP23.8■■□□□ 1.4
HIF3A-203ENST00000291300 ATP7AQ04656 1500 aa23.79■■□□□ 1.4
HIF3A-203ENST00000291300 IQGAP3Q86VI3 1631 aa23.79■■□□□ 1.4
HIF3A-203ENST00000291300 MAGI2Q86UL8 1455 aa23.78■■□□□ 1.4
HIF3A-203ENST00000291300 DDX10Q13206 875 aaKnown RBP23.77■■□□□ 1.4
HIF3A-203ENST00000291300 PLA2R1Q13018 1463 aa23.75■■□□□ 1.39
HIF3A-203ENST00000291300 HSPA5P11021 654 aaKnown RBP23.74■■□□□ 1.39
HIF3A-203ENST00000291300 MYT1LQ9UL68 1186 aa23.72■■□□□ 1.39
HIF3A-203ENST00000291300 KIDINS220Q9ULH0 1771 aa23.72■■□□□ 1.39
HIF3A-203ENST00000291300 ZNF326Q5BKZ1 582 aaKnown RBP23.68■■□□□ 1.38
HIF3A-203ENST00000291300 ZNF518AQ6AHZ1 1483 aa23.67■■□□□ 1.38
HIF3A-203ENST00000291300 YTHDC1Q96MU7 727 aaKnown RBP23.67■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms