RNA–Protein interactions for RNA: ENST00000288602.10

BRAF-201, Transcript of B-Raf proto-oncogene, serine/threonine kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRAF, Length 2,480 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAF-201ENST00000288602 PLEKHD1A6NEE1 506 aa27.75■■■□□ 2.03
BRAF-201ENST00000288602 GPATCH8Q9UKJ3 1502 aaKnown RBP27.74■■■□□ 2.03
BRAF-201ENST00000288602 PTPRGP23470 1445 aa27.74■■■□□ 2.03
BRAF-201ENST00000288602 AKNAQ7Z591 1439 aa27.74■■■□□ 2.03
BRAF-201ENST00000288602 DNMT1P26358 1616 aaKnown RBP27.73■■■□□ 2.03
BRAF-201ENST00000288602 TONSLQ96HA7 1378 aa27.73■■■□□ 2.03
BRAF-201ENST00000288602 CAMSAP2Q08AD1 1489 aa27.71■■■□□ 2.03
BRAF-201ENST00000288602 DENND4BO75064 1496 aaPredicted RBP27.7■■■□□ 2.03
BRAF-201ENST00000288602 CENPBP07199 599 aaPredicted RBP27.7■■■□□ 2.02
BRAF-201ENST00000288602 HIRIP3Q9BW71 556 aaPredicted RBP27.69■■■□□ 2.02
BRAF-201ENST00000288602 ADCY10Q96PN6 1610 aa27.69■■■□□ 2.02
BRAF-201ENST00000288602 FOXD1Q16676 465 aa27.68■■■□□ 2.02
BRAF-201ENST00000288602 ITSN2Q9NZM3 1697 aa27.66■■■□□ 2.02
BRAF-201ENST00000288602 MPHOSPH9Q99550 1183 aa27.66■■■□□ 2.02
BRAF-201ENST00000288602 ROCK1Q13464 1354 aa27.65■■■□□ 2.02
BRAF-201ENST00000288602 ERCC6L2Q5T890 1561 aa27.62■■■□□ 2.01
BRAF-201ENST00000288602 ABCC10Q5T3U5 1492 aa27.59■■■□□ 2.01
BRAF-201ENST00000288602 CDC42BPAQ5VT25 1732 aa27.58■■■□□ 2.01
BRAF-201ENST00000288602 SHROOM2Q13796 1616 aa27.57■■■□□ 2
BRAF-201ENST00000288602 NCOA1Q15788 1441 aa27.54■■■□□ 2
BRAF-201ENST00000288602 DDX10Q13206 875 aaKnown RBP27.53■■■□□ 2
BRAF-201ENST00000288602 KDM5BQ9UGL1 1544 aa27.51■■□□□ 1.99
BRAF-201ENST00000288602 SLC4A1APQ9BWU0 796 aaKnown RBP27.51■■□□□ 1.99
BRAF-201ENST00000288602 HNRNPMP52272 730 aaKnown RBP eCLIP27.48■■□□□ 1.99
BRAF-201ENST00000288602 CROCC2H7BZ55 1655 aa27.48■■□□□ 1.99
BRAF-201ENST00000288602 PELP1Q8IZL8 1130 aaKnown RBP27.47■■□□□ 1.99
BRAF-201ENST00000288602 ADGBQ8N7X0 1667 aa27.47■■□□□ 1.99
BRAF-201ENST00000288602 GTF3C3Q9Y5Q9 886 aa27.45■■□□□ 1.99
BRAF-201ENST00000288602 ANKRD30AQ9BXX3 1397 aa27.44■■□□□ 1.98
BRAF-201ENST00000288602 ADGRL2O95490 1459 aa27.43■■□□□ 1.98
BRAF-201ENST00000288602 ANKRD30BQ9BXX2 1392 aa27.42■■□□□ 1.98
BRAF-201ENST00000288602 L3MBTL2Q969R5 705 aa27.42■■□□□ 1.98
BRAF-201ENST00000288602 C9orf84Q5VXU9 1444 aa27.4■■□□□ 1.98
BRAF-201ENST00000288602 KCNH8Q96L42 1107 aa27.39■■□□□ 1.98
BRAF-201ENST00000288602 PZPP20742 1482 aa27.39■■□□□ 1.97
BRAF-201ENST00000288602 TSPY4P0CV99 314 aa27.39■■□□□ 1.97
BRAF-201ENST00000288602 TSPY10P0CW01 314 aa27.39■■□□□ 1.97
BRAF-201ENST00000288602 CLASP1Q7Z460 1538 aa27.38■■□□□ 1.97
BRAF-201ENST00000288602 ABCC2Q92887 1545 aa27.38■■□□□ 1.97
BRAF-201ENST00000288602 CDC42BPBQ9Y5S2 1711 aa27.37■■□□□ 1.97
BRAF-201ENST00000288602 ANKRD50Q9ULJ7 1429 aa27.37■■□□□ 1.97
BRAF-201ENST00000288602 TTC37Q6PGP7 1564 aa27.34■■□□□ 1.97
BRAF-201ENST00000288602 SAMD9LQ8IVG5 1584 aa27.34■■□□□ 1.97
BRAF-201ENST00000288602 MBD5Q9P267 1494 aa27.33■■□□□ 1.97
BRAF-201ENST00000288602 RPRD2Q5VT52 1461 aaKnown RBP27.32■■□□□ 1.96
BRAF-201ENST00000288602 PREX2Q70Z35 1606 aa27.32■■□□□ 1.96
BRAF-201ENST00000288602 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP27.31■■□□□ 1.964e-6■■■□□ 15.9
BRAF-201ENST00000288602 SHANK2Q9UPX8 1470 aa27.31■■□□□ 1.96
BRAF-201ENST00000288602 PKD2Q13563 968 aa27.3■■□□□ 1.96
BRAF-201ENST00000288602 ARHGAP5Q13017 1502 aa27.28■■□□□ 1.96
BRAF-201ENST00000288602 KIF15Q9NS87 1388 aa27.27■■□□□ 1.96
BRAF-201ENST00000288602 HSPA5P11021 654 aaKnown RBP27.26■■□□□ 1.95
BRAF-201ENST00000288602 NUP155O75694 1391 aa27.26■■□□□ 1.95
BRAF-201ENST00000288602 ARHGEF5Q12774 1597 aa27.26■■□□□ 1.95
BRAF-201ENST00000288602 NBPF8Q3BBV2 869 aa27.25■■□□□ 1.95
BRAF-201ENST00000288602 CCDC141Q6ZP82 1450 aa27.24■■□□□ 1.95
BRAF-201ENST00000288602 SYCP2Q9BX26 1530 aa27.24■■□□□ 1.95
BRAF-201ENST00000288602 ZCCHC11Q5TAX3 1644 aaKnown RBP27.23■■□□□ 1.95
BRAF-201ENST00000288602 TEX14Q8IWB6 1497 aa27.23■■□□□ 1.95
BRAF-201ENST00000288602 KIAA1107Q9UPP5 1409 aa27.23■■□□□ 1.95
BRAF-201ENST00000288602 EIF4G2P78344 907 aaKnown RBP eCLIP27.18■■□□□ 1.94
BRAF-201ENST00000288602 MYO5CQ9NQX4 1742 aa27.18■■□□□ 1.94
BRAF-201ENST00000288602 UHRF1BP1LA0JNW5 1464 aa27.15■■□□□ 1.94
BRAF-201ENST00000288602 RSPH4AQ5TD94 716 aa27.15■■□□□ 1.94
BRAF-201ENST00000288602 WASHC2AQ641Q2 1341 aa27.14■■□□□ 1.93
BRAF-201ENST00000288602 ANP32CO43423 234 aa27.12■■□□□ 1.93
BRAF-201ENST00000288602 ZNF326Q5BKZ1 582 aaKnown RBP27.12■■□□□ 1.93
BRAF-201ENST00000288602 ARHGEF12Q9NZN5 1544 aa27.11■■□□□ 1.93
BRAF-201ENST00000288602 PLCH2O75038 1416 aa27.09■■□□□ 1.93
BRAF-201ENST00000288602 C11orf95C9JLR9 678 aaPredicted RBP27.08■■□□□ 1.93
BRAF-201ENST00000288602 GRWD1Q9BQ67 446 aaKnown RBP eCLIP27.07■■□□□ 1.926e-7■■□□□ 12.5
BRAF-201ENST00000288602 KDM5DQ9BY66 1539 aa27.06■■□□□ 1.92
BRAF-201ENST00000288602 EFCAB2Q5VUJ9 269 aa27.05■■□□□ 1.92
BRAF-201ENST00000288602 PLEKHH2Q8IVE3 1493 aa27.02■■□□□ 1.92
BRAF-201ENST00000288602 FAM135AQ9P2D6 1515 aa27.01■■□□□ 1.91
BRAF-201ENST00000288602 MAST1Q9Y2H9 1570 aa27.01■■□□□ 1.91
BRAF-201ENST00000288602 TRAPPC8Q9Y2L5 1435 aa26.99■■□□□ 1.91
BRAF-201ENST00000288602 KDM2AQ9Y2K7 1162 aa26.97■■□□□ 1.91
BRAF-201ENST00000288602 CCER2I3L3R5 266 aa26.96■■□□□ 1.91
BRAF-201ENST00000288602 SPATA31E1Q6ZUB1 1445 aa26.95■■□□□ 1.91
BRAF-201ENST00000288602 AFAP1Q8N556 730 aa26.95■■□□□ 1.91
BRAF-201ENST00000288602 ABCC1P33527 1531 aa26.94■■□□□ 1.9
BRAF-201ENST00000288602 OSCARQ8IYS5 282 aa26.94■■□□□ 1.9
BRAF-201ENST00000288602 WDR7Q9Y4E6 1490 aa26.94■■□□□ 1.9
BRAF-201ENST00000288602 PLXNC1O60486 1568 aa26.94■■□□□ 1.9
BRAF-201ENST00000288602 CCDC7Q96M83 1385 aa26.93■■□□□ 1.9
BRAF-201ENST00000288602 DCAF11Q8TEB1 546 aa26.91■■□□□ 1.9
BRAF-201ENST00000288602 UNC13BO14795 1591 aa26.89■■□□□ 1.9
BRAF-201ENST00000288602 DUOX2Q9NRD8 1548 aa26.88■■□□□ 1.89
BRAF-201ENST00000288602 KIF7Q2M1P5 1343 aa26.88■■□□□ 1.89
BRAF-201ENST00000288602 SPAG9O60271 1321 aaKnown RBP26.87■■□□□ 1.89
BRAF-201ENST00000288602 USP47Q96K76 1375 aa26.87■■□□□ 1.89
BRAF-201ENST00000288602 CNTLNQ9NXG0 1405 aa26.86■■□□□ 1.89
BRAF-201ENST00000288602 RGL3Q3MIN7 710 aa26.85■■□□□ 1.89
BRAF-201ENST00000288602 ASXL2Q76L83 1435 aa26.84■■□□□ 1.89
BRAF-201ENST00000288602 CCDC144AA2RUR9 1427 aa26.84■■□□□ 1.89
BRAF-201ENST00000288602 PLA2R1Q13018 1463 aa26.83■■□□□ 1.89
BRAF-201ENST00000288602 FANCAO15360 1455 aa26.83■■□□□ 1.89
BRAF-201ENST00000288602 ERBINQ96RT1 1412 aa26.83■■□□□ 1.88
BRAF-201ENST00000288602 POLR3GLQ9BT43 218 aa26.82■■□□□ 1.88
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms