RNA–Protein interactions for RNA: ENST00000287701.14

HMBOX1-201, Transcript of homeobox containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMBOX1, Length 3,184 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMBOX1-201ENST00000287701 NPM2Q86SE8 214 aaKnown RBP13.05□□□□□ -0.32
HMBOX1-201ENST00000287701 HECW1Q76N89 1606 aa13.04□□□□□ -0.32
HMBOX1-201ENST00000287701 DAXXQ9UER7 740 aaPredicted RBP13.04□□□□□ -0.32
HMBOX1-201ENST00000287701 FAM50AQ14320 339 aaKnown RBP13.04□□□□□ -0.32
HMBOX1-201ENST00000287701 CFTRP13569 1480 aa13.02□□□□□ -0.32
HMBOX1-201ENST00000287701 VSIG10Q8N0Z9 540 aa13.02□□□□□ -0.33
HMBOX1-201ENST00000287701 AQRO60306 1485 aaKnown RBP eCLIP13.01□□□□□ -0.332e-6■■■■□ 20.6
HMBOX1-201ENST00000287701 PCF11O94913 1555 aaKnown RBP13□□□□□ -0.33
HMBOX1-201ENST00000287701 PODXL2Q9NZ53 605 aa13□□□□□ -0.33
HMBOX1-201ENST00000287701 RRP1P56182 461 aaKnown RBP13□□□□□ -0.33
HMBOX1-201ENST00000287701 DCAF11Q8TEB1 546 aa13□□□□□ -0.33
HMBOX1-201ENST00000287701 FYCO1Q9BQS8 1478 aa13□□□□□ -0.33
HMBOX1-201ENST00000287701 FMN1Q68DA7 1419 aa12.99□□□□□ -0.33
HMBOX1-201ENST00000287701 FGD6Q6ZV73 1430 aa12.99□□□□□ -0.33
HMBOX1-201ENST00000287701 FANCD2Q9BXW9 1451 aa12.99□□□□□ -0.33
HMBOX1-201ENST00000287701 NAIPQ13075 1403 aa12.99□□□□□ -0.33
HMBOX1-201ENST00000287701 SPATA31E1Q6ZUB1 1445 aa12.99□□□□□ -0.33
HMBOX1-201ENST00000287701 HSP90AA2PQ14568 343 aaPredicted RBP12.97□□□□□ -0.33
HMBOX1-201ENST00000287701 L1TD1Q5T7N2 865 aaKnown RBP12.97□□□□□ -0.33
HMBOX1-201ENST00000287701 GCC2Q8IWJ2 1684 aa12.97□□□□□ -0.33
HMBOX1-201ENST00000287701 SLC24A1O60721 1099 aa12.96□□□□□ -0.33
HMBOX1-201ENST00000287701 DHX29Q7Z478 1369 aaKnown RBP12.96□□□□□ -0.33
HMBOX1-201ENST00000287701 RRAGDQ9NQL2 400 aaPredicted RBP12.96□□□□□ -0.33
HMBOX1-201ENST00000287701 LRPPRCP42704 1394 aaKnown RBP12.95□□□□□ -0.34
HMBOX1-201ENST00000287701 CENPJQ9HC77 1338 aaPredicted RBP12.95□□□□□ -0.34
HMBOX1-201ENST00000287701 CUX1P39880 1505 aa12.94□□□□□ -0.34
HMBOX1-201ENST00000287701 URB2Q14146 1524 aaKnown RBP12.94□□□□□ -0.34
HMBOX1-201ENST00000287701 MIA2Q96PC5 1412 aa12.94□□□□□ -0.34
HMBOX1-201ENST00000287701 HSP90AA1P07900 732 aaKnown RBP12.94□□□□□ -0.34
HMBOX1-201ENST00000287701 CLCN1P35523 988 aa12.94□□□□□ -0.34
HMBOX1-201ENST00000287701 EXOC6Q8TAG9 804 aa12.93□□□□□ -0.34
HMBOX1-201ENST00000287701 KIF7Q2M1P5 1343 aa12.93□□□□□ -0.34
HMBOX1-201ENST00000287701 ARID4BQ4LE39 1312 aaPredicted RBP12.93□□□□□ -0.34
HMBOX1-201ENST00000287701 CASKIN1Q8WXD9 1431 aa12.92□□□□□ -0.34
HMBOX1-201ENST00000287701 DENND4BO75064 1496 aaPredicted RBP12.92□□□□□ -0.34
HMBOX1-201ENST00000287701 RIMBP3CA6NJZ7 1639 aa12.92□□□□□ -0.34
HMBOX1-201ENST00000287701 RIMBP3BA6NNM3 1639 aa12.92□□□□□ -0.34
HMBOX1-201ENST00000287701 RIMBP3Q9UFD9 1639 aa12.92□□□□□ -0.34
HMBOX1-201ENST00000287701 PTPRKQ15262 1439 aa12.92□□□□□ -0.34
HMBOX1-201ENST00000287701 EFCAB5A4FU69 1503 aa12.92□□□□□ -0.34
HMBOX1-201ENST00000287701 PDE3BQ13370 1112 aa12.91□□□□□ -0.34
HMBOX1-201ENST00000287701 PNISRQ8TF01 805 aaKnown RBP12.91□□□□□ -0.34
HMBOX1-201ENST00000287701 KTN1Q86UP2 1357 aaKnown RBP12.91□□□□□ -0.34
HMBOX1-201ENST00000287701 FRAT2O75474 233 aaPredicted RBP12.9□□□□□ -0.34
HMBOX1-201ENST00000287701 FGD5Q6ZNL6 1462 aa12.89□□□□□ -0.35
HMBOX1-201ENST00000287701 PNNQ9H307 717 aaKnown RBP12.88□□□□□ -0.35
HMBOX1-201ENST00000287701 RCAN3Q9UKA8 241 aa12.88□□□□□ -0.35
HMBOX1-201ENST00000287701 ZMYM4Q5VZL5 1548 aa12.88□□□□□ -0.35
HMBOX1-201ENST00000287701 MYOM3Q5VTT5 1437 aa12.88□□□□□ -0.35
HMBOX1-201ENST00000287701 INSRP06213 1382 aa12.88□□□□□ -0.35
HMBOX1-201ENST00000287701 VIRMAQ69YN4 1812 aaKnown RBP12.88□□□□□ -0.35
HMBOX1-201ENST00000287701 TEX14Q8IWB6 1497 aa12.87□□□□□ -0.35
HMBOX1-201ENST00000287701 BRD4O60885 1362 aaPredicted RBP12.86□□□□□ -0.35
HMBOX1-201ENST00000287701 FAM161AQ3B820 660 aa12.86□□□□□ -0.35
HMBOX1-201ENST00000287701 ROCK2O75116 1388 aaKnown RBP12.86□□□□□ -0.35
HMBOX1-201ENST00000287701 RPRD2Q5VT52 1461 aaKnown RBP12.86□□□□□ -0.35
HMBOX1-201ENST00000287701 IFT140Q96RY7 1462 aa12.85□□□□□ -0.35
HMBOX1-201ENST00000287701 NAP1L5Q96NT1 182 aaPredicted RBP12.85□□□□□ -0.35
HMBOX1-201ENST00000287701 KDM2BQ8NHM5 1336 aa12.84□□□□□ -0.35
HMBOX1-201ENST00000287701 IGF1RP08069 1367 aa12.84□□□□□ -0.35
HMBOX1-201ENST00000287701 PLEKHG5O94827 1062 aa12.84□□□□□ -0.35
HMBOX1-201ENST00000287701 CALD1Q05682 793 aaKnown RBP12.83□□□□□ -0.35
HMBOX1-201ENST00000287701 TCOF1Q13428 1488 aaKnown RBP12.82□□□□□ -0.36
HMBOX1-201ENST00000287701 FSD2A1L4K1 749 aa12.82□□□□□ -0.36
HMBOX1-201ENST00000287701 TPM2P07951 284 aa12.82□□□□□ -0.36
HMBOX1-201ENST00000287701 C8orf34Q49A92 452 aa12.82□□□□□ -0.36
HMBOX1-201ENST00000287701 L3MBTL2Q969R5 705 aa12.82□□□□□ -0.36
HMBOX1-201ENST00000287701 PDCL3Q9H2J4 239 aa12.82□□□□□ -0.36
HMBOX1-201ENST00000287701 CENPQQ7L2Z9 268 aaPredicted RBP12.81□□□□□ -0.36
HMBOX1-201ENST00000287701 EIF4G3O43432 1585 aaKnown RBP12.81□□□□□ -0.36
HMBOX1-201ENST00000287701 BCORL1Q5H9F3 1711 aa12.8□□□□□ -0.36
HMBOX1-201ENST00000287701 SLC4A3P48751 1232 aa12.8□□□□□ -0.36
HMBOX1-201ENST00000287701 OSCARQ8IYS5 282 aa12.8□□□□□ -0.36
HMBOX1-201ENST00000287701 SUPT6HQ7KZ85 1726 aaKnown RBP12.8□□□□□ -0.36
HMBOX1-201ENST00000287701 TARBP1Q13395 1621 aaKnown RBP12.8□□□□□ -0.36
HMBOX1-201ENST00000287701 ARHGEF11O15085 1522 aa12.8□□□□□ -0.36
HMBOX1-201ENST00000287701 PLEKHH2Q8IVE3 1493 aa12.8□□□□□ -0.36
HMBOX1-201ENST00000287701 CHD1O14646 1710 aa12.79□□□□□ -0.36
HMBOX1-201ENST00000287701 DNMBPQ6XZF7 1577 aa12.79□□□□□ -0.36
HMBOX1-201ENST00000287701 KIF15Q9NS87 1388 aa12.79□□□□□ -0.36
HMBOX1-201ENST00000287701 POGKQ9P215 609 aa12.79□□□□□ -0.36
HMBOX1-201ENST00000287701 MBD5Q9P267 1494 aa12.78□□□□□ -0.36
HMBOX1-201ENST00000287701 E9PCH4 1651 aa12.78□□□□□ -0.36
HMBOX1-201ENST00000287701 CARMIL1Q5VZK9 1371 aa12.78□□□□□ -0.36
HMBOX1-201ENST00000287701 TMC1Q8TDI8 760 aa12.78□□□□□ -0.36
HMBOX1-201ENST00000287701 SNAPC4Q5SXM2 1469 aa12.78□□□□□ -0.36
HMBOX1-201ENST00000287701 EHBP1L1Q8N3D4 1523 aa12.77□□□□□ -0.36
HMBOX1-201ENST00000287701 ISY1Q9ULR0 285 aaKnown RBP12.77□□□□□ -0.37
HMBOX1-201ENST00000287701 KDM5CP41229 1560 aa12.77□□□□□ -0.37
HMBOX1-201ENST00000287701 ANKRD30BQ9BXX2 1392 aa12.77□□□□□ -0.37
HMBOX1-201ENST00000287701 NBPF8Q3BBV2 869 aa12.77□□□□□ -0.37
HMBOX1-201ENST00000287701 TOPBP1Q92547 1522 aa12.76□□□□□ -0.37
HMBOX1-201ENST00000287701 KIF14Q15058 1648 aa12.76□□□□□ -0.37
HMBOX1-201ENST00000287701 MYBBP1AQ9BQG0 1328 aaKnown RBP12.76□□□□□ -0.37
HMBOX1-201ENST00000287701 RALBP1Q15311 655 aa12.76□□□□□ -0.37
HMBOX1-201ENST00000287701 UGGT2Q9NYU1 1516 aa12.75□□□□□ -0.37
HMBOX1-201ENST00000287701 XRCC6P12956 609 aaKnown RBP eCLIP12.75□□□□□ -0.37
HMBOX1-201ENST00000287701 GOLGA6L3A6NEY3 463 aa12.75□□□□□ -0.37
HMBOX1-201ENST00000287701 PRDM4Q9UKN5 801 aa12.75□□□□□ -0.37
HMBOX1-201ENST00000287701 MPHOSPH9Q99550 1183 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms