RNA–Protein interactions for RNA: ENST00000287538.9

ZIC3-201, Transcript of Zic family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZIC3, Length 3,469 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC3-201ENST00000287538 TSPY4P0CV99 314 aa18.16■□□□□ 0.5
ZIC3-201ENST00000287538 TSPY10P0CW01 314 aa18.16■□□□□ 0.5
ZIC3-201ENST00000287538 MPHOSPH9Q99550 1183 aa18.16■□□□□ 0.5
ZIC3-201ENST00000287538 NAIPQ13075 1403 aa18.13■□□□□ 0.49
ZIC3-201ENST00000287538 PTPN23Q9H3S7 1636 aa18.12■□□□□ 0.49
ZIC3-201ENST00000287538 PPP1R15AO75807 674 aaPredicted RBP18.12■□□□□ 0.49
ZIC3-201ENST00000287538 MAPKBP1O60336 1514 aa18.11■□□□□ 0.49
ZIC3-201ENST00000287538 BCANQ96GW7 911 aa18.1■□□□□ 0.49
ZIC3-201ENST00000287538 NUP160Q12769 1436 aa18.09■□□□□ 0.49
ZIC3-201ENST00000287538 HFM1A2PYH4 1435 aa18.08■□□□□ 0.49
ZIC3-201ENST00000287538 RAPGEF6Q8TEU7 1601 aa18.08■□□□□ 0.48
ZIC3-201ENST00000287538 TROQ12816 1431 aaPredicted RBP18.08■□□□□ 0.48
ZIC3-201ENST00000287538 KDM2AQ9Y2K7 1162 aa18.06■□□□□ 0.48
ZIC3-201ENST00000287538 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.05■□□□□ 0.48
ZIC3-201ENST00000287538 ARHGEF11O15085 1522 aa18.04■□□□□ 0.48
ZIC3-201ENST00000287538 UACAQ9BZF9 1416 aa18.04■□□□□ 0.48
ZIC3-201ENST00000287538 L3MBTL2Q969R5 705 aa18.03■□□□□ 0.48
ZIC3-201ENST00000287538 ATP10BO94823 1461 aa18.03■□□□□ 0.48
ZIC3-201ENST00000287538 PKD2Q13563 968 aa18.03■□□□□ 0.48
ZIC3-201ENST00000287538 ABCC5O15440 1437 aa18.01■□□□□ 0.47
ZIC3-201ENST00000287538 DAPK1P53355 1430 aa18.01■□□□□ 0.47
ZIC3-201ENST00000287538 MIA2Q96PC5 1412 aa18■□□□□ 0.47
ZIC3-201ENST00000287538 RGL3Q3MIN7 710 aa17.99■□□□□ 0.47
ZIC3-201ENST00000287538 GPATCH8Q9UKJ3 1502 aaKnown RBP17.97■□□□□ 0.47
ZIC3-201ENST00000287538 KIF14Q15058 1648 aa17.96■□□□□ 0.47
ZIC3-201ENST00000287538 ERCC6L2Q5T890 1561 aa17.96■□□□□ 0.47
ZIC3-201ENST00000287538 NUP155O75694 1391 aa17.96■□□□□ 0.47
ZIC3-201ENST00000287538 FKBP8Q14318 412 aa17.95■□□□□ 0.46
ZIC3-201ENST00000287538 CAMSAP2Q08AD1 1489 aa17.94■□□□□ 0.46
ZIC3-201ENST00000287538 KDM6BO15054 1643 aa17.94■□□□□ 0.46
ZIC3-201ENST00000287538 CHD1O14646 1710 aa17.94■□□□□ 0.46
ZIC3-201ENST00000287538 ANKRD30AQ9BXX3 1397 aa17.94■□□□□ 0.46
ZIC3-201ENST00000287538 NPM1P06748 294 aaKnown RBP eCLIP17.93■□□□□ 0.46
ZIC3-201ENST00000287538 RBM19Q9Y4C8 960 aaKnown RBP17.93■□□□□ 0.46
ZIC3-201ENST00000287538 HSPA5P11021 654 aaKnown RBP17.92■□□□□ 0.46
ZIC3-201ENST00000287538 TIMELESSQ9UNS1 1208 aa17.9■□□□□ 0.46
ZIC3-201ENST00000287538 ANP32CO43423 234 aa17.9■□□□□ 0.46
ZIC3-201ENST00000287538 OSCARQ8IYS5 282 aa17.9■□□□□ 0.46
ZIC3-201ENST00000287538 AFAP1Q8N556 730 aa17.89■□□□□ 0.45
ZIC3-201ENST00000287538 TCOF1Q13428 1488 aaKnown RBP17.88■□□□□ 0.45
ZIC3-201ENST00000287538 EIF4G2P78344 907 aaKnown RBP eCLIP17.88■□□□□ 0.45
ZIC3-201ENST00000287538 NBPF8Q3BBV2 869 aa17.86■□□□□ 0.45
ZIC3-201ENST00000287538 ANKRD50Q9ULJ7 1429 aa17.86■□□□□ 0.45
ZIC3-201ENST00000287538 SENP3Q9H4L4 574 aaPredicted RBP17.86■□□□□ 0.45
ZIC3-201ENST00000287538 NCOA1Q15788 1441 aa17.86■□□□□ 0.45
ZIC3-201ENST00000287538 EFCAB2Q5VUJ9 269 aa17.85■□□□□ 0.45
ZIC3-201ENST00000287538 KIF15Q9NS87 1388 aa17.85■□□□□ 0.45
ZIC3-201ENST00000287538 DCAF11Q8TEB1 546 aa17.84■□□□□ 0.45
ZIC3-201ENST00000287538 C9orf84Q5VXU9 1444 aa17.84■□□□□ 0.45
ZIC3-201ENST00000287538 SENP3-EIF4A1A0A087X0R7 540 aa17.84■□□□□ 0.45
ZIC3-201ENST00000287538 AKNAQ7Z591 1439 aa17.83■□□□□ 0.45
ZIC3-201ENST00000287538 ARHGAP5Q13017 1502 aa17.83■□□□□ 0.44
ZIC3-201ENST00000287538 NEFLP07196 543 aa17.81■□□□□ 0.44
ZIC3-201ENST00000287538 CYB5RLQ6IPT4 315 aa17.81■□□□□ 0.44
ZIC3-201ENST00000287538 ABCA8O94911 1581 aa17.81■□□□□ 0.44
ZIC3-201ENST00000287538 ROCK1Q13464 1354 aa17.78■□□□□ 0.44
ZIC3-201ENST00000287538 PRKCSHP14314 528 aaPredicted RBP17.77■□□□□ 0.44
ZIC3-201ENST00000287538 ANKRD30BQ9BXX2 1392 aa17.76■□□□□ 0.43
ZIC3-201ENST00000287538 MSH5O43196 834 aa17.76■□□□□ 0.43
ZIC3-201ENST00000287538 SPAG9O60271 1321 aaKnown RBP17.75■□□□□ 0.43
ZIC3-201ENST00000287538 C11orf95C9JLR9 678 aaPredicted RBP17.74■□□□□ 0.43
ZIC3-201ENST00000287538 DNMT1P26358 1616 aaKnown RBP17.74■□□□□ 0.43
ZIC3-201ENST00000287538 CARD11Q9BXL7 1154 aa17.74■□□□□ 0.43
ZIC3-201ENST00000287538 DENND4BO75064 1496 aaPredicted RBP17.74■□□□□ 0.43
ZIC3-201ENST00000287538 CHGAP10645 457 aaKnown RBP17.73■□□□□ 0.43
ZIC3-201ENST00000287538 ERICH6Q7L0X2 663 aa17.73■□□□□ 0.43
ZIC3-201ENST00000287538 ABCC10Q5T3U5 1492 aa17.72■□□□□ 0.43
ZIC3-201ENST00000287538 KIF3BO15066 747 aa17.72■□□□□ 0.43
ZIC3-201ENST00000287538 WASHC2AQ641Q2 1341 aa17.71■□□□□ 0.42
ZIC3-201ENST00000287538 RSPH4AQ5TD94 716 aa17.7■□□□□ 0.42
ZIC3-201ENST00000287538 FAM9BQ8IZU0 186 aa17.69■□□□□ 0.42
ZIC3-201ENST00000287538 SYCP2Q9BX26 1530 aa17.68■□□□□ 0.42
ZIC3-201ENST00000287538 ITSN2Q9NZM3 1697 aa17.68■□□□□ 0.42
ZIC3-201ENST00000287538 GGT6Q6P531 493 aa17.68■□□□□ 0.42
ZIC3-201ENST00000287538 ABCC2Q92887 1545 aa17.66■□□□□ 0.42
ZIC3-201ENST00000287538 KIAA1107Q9UPP5 1409 aa17.66■□□□□ 0.42
ZIC3-201ENST00000287538 CDC42BPAQ5VT25 1732 aa17.66■□□□□ 0.42
ZIC3-201ENST00000287538 CCDC141Q6ZP82 1450 aa17.66■□□□□ 0.42
ZIC3-201ENST00000287538 PZPP20742 1482 aa17.65■□□□□ 0.42
ZIC3-201ENST00000287538 GCC2Q8IWJ2 1684 aa17.64■□□□□ 0.41
ZIC3-201ENST00000287538 PLEKHH2Q8IVE3 1493 aa17.64■□□□□ 0.41
ZIC3-201ENST00000287538 HNRNPUQ00839 825 aaKnown RBP eCLIP17.64■□□□□ 0.41
ZIC3-201ENST00000287538 TTC37Q6PGP7 1564 aa17.63■□□□□ 0.41
ZIC3-201ENST00000287538 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.63■□□□□ 0.41
ZIC3-201ENST00000287538 TRAPPC8Q9Y2L5 1435 aa17.63■□□□□ 0.41
ZIC3-201ENST00000287538 SCAPERQ9BY12 1400 aa17.62■□□□□ 0.41
ZIC3-201ENST00000287538 ST20-MTHFSA0A0A6YYL1 179 aa17.62■□□□□ 0.41
ZIC3-201ENST00000287538 MBD5Q9P267 1494 aa17.62■□□□□ 0.41
ZIC3-201ENST00000287538 NBPF1Q3BBV0 1214 aa17.61■□□□□ 0.41
ZIC3-201ENST00000287538 RPRD2Q5VT52 1461 aaKnown RBP17.61■□□□□ 0.41
ZIC3-201ENST00000287538 RAPGEF3O95398 923 aa17.6■□□□□ 0.41
ZIC3-201ENST00000287538 MRS2Q9HD23 443 aa17.59■□□□□ 0.41
ZIC3-201ENST00000287538 SAMD9LQ8IVG5 1584 aa17.59■□□□□ 0.41
ZIC3-201ENST00000287538 CCDC184Q52MB2 194 aa17.59■□□□□ 0.41
ZIC3-201ENST00000287538 CCDC144AA2RUR9 1427 aa17.57■□□□□ 0.4
ZIC3-201ENST00000287538 PLCH2O75038 1416 aa17.57■□□□□ 0.4
ZIC3-201ENST00000287538 KIF7Q2M1P5 1343 aa17.57■□□□□ 0.4
ZIC3-201ENST00000287538 FANCIQ9NVI1 1328 aa17.57■□□□□ 0.4
ZIC3-201ENST00000287538 USP47Q96K76 1375 aa17.56■□□□□ 0.4
ZIC3-201ENST00000287538 NUTM2DQ5VT03 806 aaPredicted RBP17.56■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms