RNA–Protein interactions for RNA: ENST00000287437.7

NSMCE2-201, Transcript of NSE2 (MMS21) homolog, SMC5-SMC6 complex SUMO ligase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NSMCE2, Length 1,195 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE2-201ENST00000287437 CDK13Q14004 1512 aaKnown RBP18.05■□□□□ 0.48
NSMCE2-201ENST00000287437 MLECQ14165 292 aa18.02■□□□□ 0.48
NSMCE2-201ENST00000287437 HECW1Q76N89 1606 aa18.01■□□□□ 0.47
NSMCE2-201ENST00000287437 MAGI2Q86UL8 1455 aa18.01■□□□□ 0.47
NSMCE2-201ENST00000287437 SCAPERQ9BY12 1400 aa18■□□□□ 0.47
NSMCE2-201ENST00000287437 PLCH2O75038 1416 aa17.98■□□□□ 0.47
NSMCE2-201ENST00000287437 FER1L4A9Z1Z3 1794 aa17.96■□□□□ 0.47
NSMCE2-201ENST00000287437 ATP1B4Q9UN42 357 aaPredicted RBP17.95■□□□□ 0.46
NSMCE2-201ENST00000287437 C9orf84Q5VXU9 1444 aa17.93■□□□□ 0.46
NSMCE2-201ENST00000287437 EHMT2Q96KQ7 1210 aa17.93■□□□□ 0.46
NSMCE2-201ENST00000287437 ATP10AO60312 1499 aa17.93■□□□□ 0.46
NSMCE2-201ENST00000287437 ARHGEF12Q9NZN5 1544 aa17.93■□□□□ 0.46
NSMCE2-201ENST00000287437 CERKQ8TCT0 537 aa17.92■□□□□ 0.46
NSMCE2-201ENST00000287437 EFCAB2Q5VUJ9 269 aa17.91■□□□□ 0.46
NSMCE2-201ENST00000287437 MYO5CQ9NQX4 1742 aa17.9■□□□□ 0.46
NSMCE2-201ENST00000287437 KIF14Q15058 1648 aa17.9■□□□□ 0.46
NSMCE2-201ENST00000287437 FMN1Q68DA7 1419 aa17.89■□□□□ 0.46
NSMCE2-201ENST00000287437 CEBPAP49715 358 aaPredicted RBP17.89■□□□□ 0.45
NSMCE2-201ENST00000287437 UBTFP17480 764 aaKnown RBP17.88■□□□□ 0.45
NSMCE2-201ENST00000287437 ARHGAP35Q9NRY4 1499 aa17.88■□□□□ 0.45
NSMCE2-201ENST00000287437 ZNF518AQ6AHZ1 1483 aa17.87■□□□□ 0.45
NSMCE2-201ENST00000287437 PREX1Q8TCU6 1659 aa17.87■□□□□ 0.45
NSMCE2-201ENST00000287437 CDK11AQ9UQ88 783 aaPredicted RBP17.86■□□□□ 0.45
NSMCE2-201ENST00000287437 ARHGAP5Q13017 1502 aa17.86■□□□□ 0.45
NSMCE2-201ENST00000287437 AFAP1Q8N556 730 aa17.85■□□□□ 0.45
NSMCE2-201ENST00000287437 KDM5CP41229 1560 aa17.84■□□□□ 0.45
NSMCE2-201ENST00000287437 TROQ12816 1431 aaPredicted RBP17.84■□□□□ 0.45
NSMCE2-201ENST00000287437 MYT1LQ9UL68 1186 aa17.82■□□□□ 0.44
NSMCE2-201ENST00000287437 CLIP1P30622 1438 aa17.81■□□□□ 0.44
NSMCE2-201ENST00000287437 DIP2CQ9Y2E4 1556 aa17.81■□□□□ 0.44
NSMCE2-201ENST00000287437 UHRF1BP1Q6BDS2 1440 aa17.81■□□□□ 0.44
NSMCE2-201ENST00000287437 MSH5O43196 834 aa17.79■□□□□ 0.44
NSMCE2-201ENST00000287437 STRCQ7RTU9 1775 aa17.79■□□□□ 0.44
NSMCE2-201ENST00000287437 ABCA6Q8N139 1617 aa17.78■□□□□ 0.44
NSMCE2-201ENST00000287437 LRRIQ1Q96JM4 1722 aa17.78■□□□□ 0.44
NSMCE2-201ENST00000287437 REREQ9P2R6 1566 aa17.77■□□□□ 0.44
NSMCE2-201ENST00000287437 DMRT2Q9Y5R5 561 aa17.76■□□□□ 0.43
NSMCE2-201ENST00000287437 MLH3Q9UHC1 1453 aa17.75■□□□□ 0.43
NSMCE2-201ENST00000287437 CDC42BPBQ9Y5S2 1711 aa17.75■□□□□ 0.43
NSMCE2-201ENST00000287437 TRAPPC8Q9Y2L5 1435 aa17.75■□□□□ 0.43
NSMCE2-201ENST00000287437 ABCC1P33527 1531 aa17.73■□□□□ 0.43
NSMCE2-201ENST00000287437 C3P01024 1663 aa17.73■□□□□ 0.43
NSMCE2-201ENST00000287437 PREX2Q70Z35 1606 aa17.72■□□□□ 0.43
NSMCE2-201ENST00000287437 AGLP35573 1532 aa17.72■□□□□ 0.43
NSMCE2-201ENST00000287437 ESF1Q9H501 851 aaKnown RBP17.71■□□□□ 0.43
NSMCE2-201ENST00000287437 DISP3Q9P2K9 1392 aa17.7■□□□□ 0.42
NSMCE2-201ENST00000287437 ITSN2Q9NZM3 1697 aa17.7■□□□□ 0.42
NSMCE2-201ENST00000287437 PTPRTO14522 1441 aa17.69■□□□□ 0.42
NSMCE2-201ENST00000287437 SETD1BQ9UPS6 1966 aaKnown RBP17.69■□□□□ 0.42
NSMCE2-201ENST00000287437 CCDC18Q5T9S5 1454 aa17.69■□□□□ 0.42
NSMCE2-201ENST00000287437 CASKIN1Q8WXD9 1431 aa17.68■□□□□ 0.42
NSMCE2-201ENST00000287437 KIDINS220Q9ULH0 1771 aa17.67■□□□□ 0.42
NSMCE2-201ENST00000287437 ILDR2Q71H61 639 aa17.67■□□□□ 0.42
NSMCE2-201ENST00000287437 CNTLNQ9NXG0 1405 aa17.64■□□□□ 0.42
NSMCE2-201ENST00000287437 LTBP4Q8N2S1 1624 aa17.64■□□□□ 0.41
NSMCE2-201ENST00000287437 CDC42BPAQ5VT25 1732 aa17.64■□□□□ 0.41
NSMCE2-201ENST00000287437 NCOA1Q15788 1441 aa17.64■□□□□ 0.41
NSMCE2-201ENST00000287437 SAMD9LQ8IVG5 1584 aa17.63■□□□□ 0.41
NSMCE2-201ENST00000287437 ZNF777Q9ULD5 760 aaPredicted RBP17.63■□□□□ 0.41
NSMCE2-201ENST00000287437 SYCP2Q9BX26 1530 aa17.61■□□□□ 0.41
NSMCE2-201ENST00000287437 FYCO1Q9BQS8 1478 aa17.6■□□□□ 0.41
NSMCE2-201ENST00000287437 CAMSAP1Q5T5Y3 1602 aa17.59■□□□□ 0.41
NSMCE2-201ENST00000287437 NPATQ14207 1427 aa17.59■□□□□ 0.41
NSMCE2-201ENST00000287437 SPATA31D1Q6ZQQ2 1576 aa17.58■□□□□ 0.41
NSMCE2-201ENST00000287437 ZMYM3Q14202 1370 aa17.58■□□□□ 0.4
NSMCE2-201ENST00000287437 SPAG9O60271 1321 aaKnown RBP17.58■□□□□ 0.4
NSMCE2-201ENST00000287437 MROH2AA6NES4 1674 aa17.58■□□□□ 0.4
NSMCE2-201ENST00000287437 GPATCH8Q9UKJ3 1502 aaKnown RBP17.57■□□□□ 0.4
NSMCE2-201ENST00000287437 SOCS7O14512 581 aa17.57■□□□□ 0.4
NSMCE2-201ENST00000287437 HNRNPMP52272 730 aaKnown RBP eCLIP17.57■□□□□ 0.44e-10■■■□□ 18.7
NSMCE2-201ENST00000287437 PPP6R1Q9UPN7 881 aa17.57■□□□□ 0.4
NSMCE2-201ENST00000287437 IQSEC2Q5JU85 1478 aa17.56■□□□□ 0.4
NSMCE2-201ENST00000287437 SUPT6HQ7KZ85 1726 aaKnown RBP17.56■□□□□ 0.4
NSMCE2-201ENST00000287437 ADRA2BP18089 450 aa17.55■□□□□ 0.4
NSMCE2-201ENST00000287437 ATP7AQ04656 1500 aa17.55■□□□□ 0.4
NSMCE2-201ENST00000287437 NCKAP5LQ9HCH0 1330 aa17.54■□□□□ 0.4
NSMCE2-201ENST00000287437 PLXNC1O60486 1568 aa17.53■□□□□ 0.4
NSMCE2-201ENST00000287437 INO80Q9ULG1 1556 aaPredicted RBP17.53■□□□□ 0.4
NSMCE2-201ENST00000287437 ZNF335Q9H4Z2 1342 aaPredicted RBP17.52■□□□□ 0.4
NSMCE2-201ENST00000287437 CLTCQ00610 1675 aaKnown RBP17.52■□□□□ 0.4
NSMCE2-201ENST00000287437 A2MP01023 1474 aa17.52■□□□□ 0.4
NSMCE2-201ENST00000287437 CFDP1Q9UEE9 299 aaPredicted RBP17.52■□□□□ 0.4
NSMCE2-201ENST00000287437 KIAA1107Q9UPP5 1409 aa17.52■□□□□ 0.4
NSMCE2-201ENST00000287437 MYO3AQ8NEV4 1616 aa17.51■□□□□ 0.39
NSMCE2-201ENST00000287437 PLEKHH2Q8IVE3 1493 aa17.5■□□□□ 0.39
NSMCE2-201ENST00000287437 PTPRKQ15262 1439 aa17.5■□□□□ 0.39
NSMCE2-201ENST00000287437 GGT6Q6P531 493 aa17.5■□□□□ 0.39
NSMCE2-201ENST00000287437 CCNB3Q8WWL7 1395 aa17.5■□□□□ 0.39
NSMCE2-201ENST00000287437 ZNF142P52746 1687 aaPredicted RBP17.49■□□□□ 0.39
NSMCE2-201ENST00000287437 PLA2R1Q13018 1463 aa17.49■□□□□ 0.39
NSMCE2-201ENST00000287437 CEP170BQ9Y4F5 1589 aaPredicted RBP17.49■□□□□ 0.39
NSMCE2-201ENST00000287437 TCOF1Q13428 1488 aaKnown RBP17.47■□□□□ 0.39
NSMCE2-201ENST00000287437 UBAP1LF5GYI3 381 aa17.46■□□□□ 0.39
NSMCE2-201ENST00000287437 PKD2Q13563 968 aa17.46■□□□□ 0.39
NSMCE2-201ENST00000287437 MTUS2Q5JR59 1369 aa17.45■□□□□ 0.38
NSMCE2-201ENST00000287437 ZNF644Q9H582 1327 aaPredicted RBP17.45■□□□□ 0.38
NSMCE2-201ENST00000287437 ADGBQ8N7X0 1667 aa17.42■□□□□ 0.38
NSMCE2-201ENST00000287437 TIAM1Q13009 1591 aa17.41■□□□□ 0.38
NSMCE2-201ENST00000287437 PIAS4Q8N2W9 510 aaPredicted RBP17.41■□□□□ 0.38
NSMCE2-201ENST00000287437 MBD5Q9P267 1494 aa17.41■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms