RNA–Protein interactions for RNA: ENST00000286301.7

CSF1R-201, Transcript of colony stimulating factor 1 receptor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSF1R, Length 3,989 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSF1R-201ENST00000286301 NUP155O75694 1391 aa12.93□□□□□ -0.34
CSF1R-201ENST00000286301 EHBP1L1Q8N3D4 1523 aa12.93□□□□□ -0.34
CSF1R-201ENST00000286301 FAM9BQ8IZU0 186 aa12.92□□□□□ -0.34
CSF1R-201ENST00000286301 CHGAP10645 457 aaKnown RBP12.92□□□□□ -0.34
CSF1R-201ENST00000286301 ADAMTS12P58397 1594 aa12.92□□□□□ -0.34
CSF1R-201ENST00000286301 HECW1Q76N89 1606 aa12.91□□□□□ -0.34
CSF1R-201ENST00000286301 NAIPQ13075 1403 aa12.91□□□□□ -0.34
CSF1R-201ENST00000286301 UACAQ9BZF9 1416 aa12.91□□□□□ -0.34
CSF1R-201ENST00000286301 SUPT6HQ7KZ85 1726 aaKnown RBP12.9□□□□□ -0.34
CSF1R-201ENST00000286301 HNRNPUQ00839 825 aaKnown RBP eCLIP12.9□□□□□ -0.34
CSF1R-201ENST00000286301 THOC2Q8NI27 1593 aaKnown RBP12.9□□□□□ -0.34
CSF1R-201ENST00000286301 DCAF11Q8TEB1 546 aa12.9□□□□□ -0.34
CSF1R-201ENST00000286301 ANKRD30AQ9BXX3 1397 aa12.9□□□□□ -0.34
CSF1R-201ENST00000286301 MAGI1Q96QZ7 1491 aaPredicted RBP12.9□□□□□ -0.34
CSF1R-201ENST00000286301 EIF4G3O43432 1585 aaKnown RBP12.89□□□□□ -0.35
CSF1R-201ENST00000286301 HFM1A2PYH4 1435 aa12.89□□□□□ -0.35
CSF1R-201ENST00000286301 WDR62O43379 1518 aa12.88□□□□□ -0.35
CSF1R-201ENST00000286301 PBRM1Q86U86 1689 aa12.88□□□□□ -0.35
CSF1R-201ENST00000286301 TROQ12816 1431 aaPredicted RBP12.87□□□□□ -0.35
CSF1R-201ENST00000286301 CARD11Q9BXL7 1154 aa12.87□□□□□ -0.35
CSF1R-201ENST00000286301 WDR97A6NE52 1622 aa12.85□□□□□ -0.35
CSF1R-201ENST00000286301 PTPN23Q9H3S7 1636 aa12.85□□□□□ -0.35
CSF1R-201ENST00000286301 FKBP8Q14318 412 aa12.85□□□□□ -0.35
CSF1R-201ENST00000286301 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.85□□□□□ -0.35
CSF1R-201ENST00000286301 EFCAB2Q5VUJ9 269 aa12.84□□□□□ -0.35
CSF1R-201ENST00000286301 MRS2Q9HD23 443 aa12.84□□□□□ -0.35
CSF1R-201ENST00000286301 NUP153P49790 1475 aaKnown RBP12.84□□□□□ -0.35
CSF1R-201ENST00000286301 CFAP43Q8NDM7 1665 aa12.84□□□□□ -0.35
CSF1R-201ENST00000286301 MIA2Q96PC5 1412 aa12.83□□□□□ -0.36
CSF1R-201ENST00000286301 MAPKBP1O60336 1514 aa12.83□□□□□ -0.36
CSF1R-201ENST00000286301 DISP1Q96F81 1524 aa12.83□□□□□ -0.36
CSF1R-201ENST00000286301 DAPK1P53355 1430 aa12.82□□□□□ -0.36
CSF1R-201ENST00000286301 MAGI3Q5TCQ9 1506 aa12.82□□□□□ -0.36
CSF1R-201ENST00000286301 SAMD9Q5K651 1589 aa12.82□□□□□ -0.36
CSF1R-201ENST00000286301 SALL2Q9Y467 1007 aaPredicted RBP12.82□□□□□ -0.36
CSF1R-201ENST00000286301 ARHGEF11O15085 1522 aa12.82□□□□□ -0.36
CSF1R-201ENST00000286301 UGGT2Q9NYU1 1516 aa12.8□□□□□ -0.36
CSF1R-201ENST00000286301 ABCC5O15440 1437 aa12.8□□□□□ -0.36
CSF1R-201ENST00000286301 KIF15Q9NS87 1388 aa12.79□□□□□ -0.36
CSF1R-201ENST00000286301 ANKRD50Q9ULJ7 1429 aa12.79□□□□□ -0.36
CSF1R-201ENST00000286301 KIAA0556O60303 1618 aa12.79□□□□□ -0.36
CSF1R-201ENST00000286301 IRX6P78412 446 aaPredicted RBP12.79□□□□□ -0.36
CSF1R-201ENST00000286301 AFAP1Q8N556 730 aa12.79□□□□□ -0.36
CSF1R-201ENST00000286301 NBPF8Q3BBV2 869 aa12.77□□□□□ -0.36
CSF1R-201ENST00000286301 OSCARQ8IYS5 282 aa12.77□□□□□ -0.37
CSF1R-201ENST00000286301 SPAG9O60271 1321 aaKnown RBP12.76□□□□□ -0.37
CSF1R-201ENST00000286301 KIF3BO15066 747 aa12.76□□□□□ -0.37
CSF1R-201ENST00000286301 GGT6Q6P531 493 aa12.76□□□□□ -0.37
CSF1R-201ENST00000286301 RAPGEF6Q8TEU7 1601 aa12.76□□□□□ -0.37
CSF1R-201ENST00000286301 CEP170Q5SW79 1584 aa12.75□□□□□ -0.37
CSF1R-201ENST00000286301 ATP10BO94823 1461 aa12.75□□□□□ -0.37
CSF1R-201ENST00000286301 PLPPR3Q6T4P5 718 aa12.75□□□□□ -0.37
CSF1R-201ENST00000286301 CAMSAP2Q08AD1 1489 aa12.75□□□□□ -0.37
CSF1R-201ENST00000286301 TMC1Q8TDI8 760 aa12.74□□□□□ -0.37
CSF1R-201ENST00000286301 CYB5RLQ6IPT4 315 aa12.74□□□□□ -0.37
CSF1R-201ENST00000286301 C9orf84Q5VXU9 1444 aa12.73□□□□□ -0.37
CSF1R-201ENST00000286301 GPATCH8Q9UKJ3 1502 aaKnown RBP12.73□□□□□ -0.37
CSF1R-201ENST00000286301 RSPH4AQ5TD94 716 aa12.73□□□□□ -0.37
CSF1R-201ENST00000286301 ARHGAP5Q13017 1502 aa12.72□□□□□ -0.37
CSF1R-201ENST00000286301 NUP160Q12769 1436 aa12.72□□□□□ -0.37
CSF1R-201ENST00000286301 WASHC2AQ641Q2 1341 aa12.71□□□□□ -0.37
CSF1R-201ENST00000286301 ST20-MTHFSA0A0A6YYL1 179 aa12.71□□□□□ -0.38
CSF1R-201ENST00000286301 NCOA1Q15788 1441 aa12.71□□□□□ -0.38
CSF1R-201ENST00000286301 RBM19Q9Y4C8 960 aaKnown RBP12.69□□□□□ -0.38
CSF1R-201ENST00000286301 ROCK2O75116 1388 aaKnown RBP12.69□□□□□ -0.38
CSF1R-201ENST00000286301 ANO8Q9HCE9 1232 aaPredicted RBP12.68□□□□□ -0.38
CSF1R-201ENST00000286301 AKNAQ7Z591 1439 aa12.68□□□□□ -0.38
CSF1R-201ENST00000286301 ROCK1Q13464 1354 aa12.68□□□□□ -0.38
CSF1R-201ENST00000286301 CCER2I3L3R5 266 aa12.67□□□□□ -0.38
CSF1R-201ENST00000286301 CCDC136Q96JN2 1154 aa12.67□□□□□ -0.38
CSF1R-201ENST00000286301 ANKRD30BQ9BXX2 1392 aa12.67□□□□□ -0.38
CSF1R-201ENST00000286301 C11orf95C9JLR9 678 aaPredicted RBP12.67□□□□□ -0.38
CSF1R-201ENST00000286301 STAG3Q9UJ98 1225 aa12.67□□□□□ -0.38
CSF1R-201ENST00000286301 CCDC144AA2RUR9 1427 aa12.66□□□□□ -0.38
CSF1R-201ENST00000286301 CC2D1BQ5T0F9 858 aaKnown RBP12.66□□□□□ -0.38
CSF1R-201ENST00000286301 USP47Q96K76 1375 aa12.66□□□□□ -0.38
CSF1R-201ENST00000286301 NUTM2DQ5VT03 806 aaPredicted RBP12.65□□□□□ -0.38
CSF1R-201ENST00000286301 MLECQ14165 292 aa12.64□□□□□ -0.39
CSF1R-201ENST00000286301 KIF7Q2M1P5 1343 aa12.64□□□□□ -0.39
CSF1R-201ENST00000286301 KIF14Q15058 1648 aa12.64□□□□□ -0.39
CSF1R-201ENST00000286301 TCOF1Q13428 1488 aaKnown RBP12.64□□□□□ -0.39
CSF1R-201ENST00000286301 NBR1Q14596 966 aa12.64□□□□□ -0.39
CSF1R-201ENST00000286301 RTN4Q9NQC3 1192 aaKnown RBP12.63□□□□□ -0.39
CSF1R-201ENST00000286301 KIAA1107Q9UPP5 1409 aa12.63□□□□□ -0.39
CSF1R-201ENST00000286301 NBPF1Q3BBV0 1214 aa12.62□□□□□ -0.39
CSF1R-201ENST00000286301 LRRIQ1Q96JM4 1722 aa12.62□□□□□ -0.39
CSF1R-201ENST00000286301 KANK1Q14678 1352 aa12.62□□□□□ -0.39
CSF1R-201ENST00000286301 PRKRIP1Q9H875 184 aaPredicted RBP12.62□□□□□ -0.39
CSF1R-201ENST00000286301 KDM6BO15054 1643 aa12.61□□□□□ -0.39
CSF1R-201ENST00000286301 CCDC184Q52MB2 194 aa12.61□□□□□ -0.39
CSF1R-201ENST00000286301 CCDC7Q96M83 1385 aa12.61□□□□□ -0.39
CSF1R-201ENST00000286301 ESF1Q9H501 851 aaKnown RBP12.6□□□□□ -0.39
CSF1R-201ENST00000286301 SCAPERQ9BY12 1400 aa12.59□□□□□ -0.39
CSF1R-201ENST00000286301 SAFB2Q14151 953 aaKnown RBP eCLIP12.59□□□□□ -0.39
CSF1R-201ENST00000286301 CCDC141Q6ZP82 1450 aa12.58□□□□□ -0.39
CSF1R-201ENST00000286301 RAPGEF3O95398 923 aa12.57□□□□□ -0.4
CSF1R-201ENST00000286301 WASHC2CQ9Y4E1 1318 aa12.57□□□□□ -0.4
CSF1R-201ENST00000286301 TMF1P82094 1093 aa12.57□□□□□ -0.4
CSF1R-201ENST00000286301 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.57□□□□□ -0.4
CSF1R-201ENST00000286301 DEKP35659 375 aaKnown RBP12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms