RNA–Protein interactions for RNA: ENST00000285176.13

CCDC144B-201, Transcript of coiled-coil domain containing 144B (pseudogene), humanhuman

BASIC

Gene CCDC144B, Length 4,310 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144B-201ENST00000285176 RAPGEF3O95398 923 aa12.73□□□□□ -0.37
CCDC144B-201ENST00000285176 STAG3Q9UJ98 1225 aa12.73□□□□□ -0.37
CCDC144B-201ENST00000285176 NUTM2DQ5VT03 806 aaPredicted RBP12.73□□□□□ -0.37
CCDC144B-201ENST00000285176 DISP1Q96F81 1524 aa12.72□□□□□ -0.37
CCDC144B-201ENST00000285176 UACAQ9BZF9 1416 aa12.72□□□□□ -0.37
CCDC144B-201ENST00000285176 NEFLP07196 543 aa12.72□□□□□ -0.37
CCDC144B-201ENST00000285176 SPAG9O60271 1321 aaKnown RBP12.71□□□□□ -0.37
CCDC144B-201ENST00000285176 NUP153P49790 1475 aaKnown RBP12.7□□□□□ -0.38
CCDC144B-201ENST00000285176 DCAF11Q8TEB1 546 aa12.69□□□□□ -0.38
CCDC144B-201ENST00000285176 TROQ12816 1431 aaPredicted RBP12.69□□□□□ -0.38
CCDC144B-201ENST00000285176 RRBP1Q9P2E9 1410 aaKnown RBP12.68□□□□□ -0.38
CCDC144B-201ENST00000285176 ERCC6L2Q5T890 1561 aa12.67□□□□□ -0.38
CCDC144B-201ENST00000285176 NUP160Q12769 1436 aa12.67□□□□□ -0.38
CCDC144B-201ENST00000285176 HECW1Q76N89 1606 aa12.67□□□□□ -0.38
CCDC144B-201ENST00000285176 ANKRD30AQ9BXX3 1397 aa12.67□□□□□ -0.38
CCDC144B-201ENST00000285176 MIER1Q8N108 512 aa12.66□□□□□ -0.38
CCDC144B-201ENST00000285176 ATP10BO94823 1461 aa12.66□□□□□ -0.38
CCDC144B-201ENST00000285176 WDR97A6NE52 1622 aa12.66□□□□□ -0.38
CCDC144B-201ENST00000285176 KIAA0556O60303 1618 aa12.66□□□□□ -0.38
CCDC144B-201ENST00000285176 ARHGAP5Q13017 1502 aa12.65□□□□□ -0.38
CCDC144B-201ENST00000285176 L3MBTL2Q969R5 705 aa12.65□□□□□ -0.38
CCDC144B-201ENST00000285176 PTPRKQ15262 1439 aa12.64□□□□□ -0.39
CCDC144B-201ENST00000285176 CHD1O14646 1710 aa12.62□□□□□ -0.39
CCDC144B-201ENST00000285176 KIF15Q9NS87 1388 aa12.62□□□□□ -0.39
CCDC144B-201ENST00000285176 UGGT2Q9NYU1 1516 aa12.62□□□□□ -0.39
CCDC144B-201ENST00000285176 EHBP1L1Q8N3D4 1523 aa12.62□□□□□ -0.39
CCDC144B-201ENST00000285176 MAGI3Q5TCQ9 1506 aa12.61□□□□□ -0.39
CCDC144B-201ENST00000285176 SCAPERQ9BY12 1400 aa12.6□□□□□ -0.39
CCDC144B-201ENST00000285176 SAFB2Q14151 953 aaKnown RBP eCLIP12.6□□□□□ -0.39
CCDC144B-201ENST00000285176 RAPGEF6Q8TEU7 1601 aa12.6□□□□□ -0.39
CCDC144B-201ENST00000285176 PLEKHG5O94827 1062 aa12.6□□□□□ -0.39
CCDC144B-201ENST00000285176 SUPT6HQ7KZ85 1726 aaKnown RBP12.59□□□□□ -0.39
CCDC144B-201ENST00000285176 CARD11Q9BXL7 1154 aa12.58□□□□□ -0.4
CCDC144B-201ENST00000285176 WASHC2CQ9Y4E1 1318 aa12.58□□□□□ -0.4
CCDC144B-201ENST00000285176 ANKRD50Q9ULJ7 1429 aa12.56□□□□□ -0.4
CCDC144B-201ENST00000285176 EIF4G2P78344 907 aaKnown RBP eCLIP12.56□□□□□ -0.4
CCDC144B-201ENST00000285176 SAMD9Q5K651 1589 aa12.55□□□□□ -0.4
CCDC144B-201ENST00000285176 DAPK1P53355 1430 aa12.55□□□□□ -0.4
CCDC144B-201ENST00000285176 ANP32CO43423 234 aa12.55□□□□□ -0.4
CCDC144B-201ENST00000285176 PPP1R15AO75807 674 aaPredicted RBP12.55□□□□□ -0.4
CCDC144B-201ENST00000285176 NAIPQ13075 1403 aa12.54□□□□□ -0.4
CCDC144B-201ENST00000285176 GPATCH8Q9UKJ3 1502 aaKnown RBP12.54□□□□□ -0.4
CCDC144B-201ENST00000285176 ERICH6Q7L0X2 663 aa12.54□□□□□ -0.4
CCDC144B-201ENST00000285176 ABCC5O15440 1437 aa12.54□□□□□ -0.4
CCDC144B-201ENST00000285176 C9orf84Q5VXU9 1444 aa12.54□□□□□ -0.4
CCDC144B-201ENST00000285176 CAMSAP2Q08AD1 1489 aa12.53□□□□□ -0.4
CCDC144B-201ENST00000285176 PTPN23Q9H3S7 1636 aa12.53□□□□□ -0.4
CCDC144B-201ENST00000285176 SALL2Q9Y467 1007 aaPredicted RBP12.53□□□□□ -0.4
CCDC144B-201ENST00000285176 ASXL2Q76L83 1435 aa12.52□□□□□ -0.41
CCDC144B-201ENST00000285176 HSPA5P11021 654 aaKnown RBP12.52□□□□□ -0.41
CCDC144B-201ENST00000285176 STK26Q9P289 416 aa12.52□□□□□ -0.41
CCDC144B-201ENST00000285176 KIF14Q15058 1648 aa12.51□□□□□ -0.41
CCDC144B-201ENST00000285176 RSPH4AQ5TD94 716 aa12.51□□□□□ -0.41
CCDC144B-201ENST00000285176 CD109Q6YHK3 1445 aa12.5□□□□□ -0.41
CCDC144B-201ENST00000285176 MIA2Q96PC5 1412 aa12.49□□□□□ -0.41
CCDC144B-201ENST00000285176 FAM9BQ8IZU0 186 aa12.49□□□□□ -0.41
CCDC144B-201ENST00000285176 CLSPNQ9HAW4 1339 aa12.48□□□□□ -0.41
CCDC144B-201ENST00000285176 HFM1A2PYH4 1435 aa12.48□□□□□ -0.41
CCDC144B-201ENST00000285176 KANK1Q14678 1352 aa12.48□□□□□ -0.41
CCDC144B-201ENST00000285176 TMC1Q8TDI8 760 aa12.47□□□□□ -0.41
CCDC144B-201ENST00000285176 MAP3K1Q13233 1512 aa12.47□□□□□ -0.41
CCDC144B-201ENST00000285176 TRAPPC8Q9Y2L5 1435 aa12.44□□□□□ -0.42
CCDC144B-201ENST00000285176 NCOA1Q15788 1441 aa12.44□□□□□ -0.42
CCDC144B-201ENST00000285176 CFAP43Q8NDM7 1665 aa12.44□□□□□ -0.42
CCDC144B-201ENST00000285176 FANCAO15360 1455 aa12.44□□□□□ -0.42
CCDC144B-201ENST00000285176 NBPF8Q3BBV2 869 aa12.44□□□□□ -0.42
CCDC144B-201ENST00000285176 ADGRL1O94910 1474 aa12.43□□□□□ -0.42
CCDC144B-201ENST00000285176 SYCP2Q9BX26 1530 aa12.43□□□□□ -0.42
CCDC144B-201ENST00000285176 NUTM2FA1L443 756 aa12.43□□□□□ -0.42
CCDC144B-201ENST00000285176 PLEKHH2Q8IVE3 1493 aa12.42□□□□□ -0.42
CCDC144B-201ENST00000285176 TNNT2P45379 298 aaPredicted RBP12.42□□□□□ -0.42
CCDC144B-201ENST00000285176 GTF3C3Q9Y5Q9 886 aa12.42□□□□□ -0.42
CCDC144B-201ENST00000285176 ABCC2Q92887 1545 aa12.42□□□□□ -0.42
CCDC144B-201ENST00000285176 CCDC144AA2RUR9 1427 aa12.42□□□□□ -0.42
CCDC144B-201ENST00000285176 ST20-MTHFSA0A0A6YYL1 179 aa12.41□□□□□ -0.42
CCDC144B-201ENST00000285176 NBPF1Q3BBV0 1214 aa12.41□□□□□ -0.42
CCDC144B-201ENST00000285176 TRAK1Q9UPV9 953 aa12.41□□□□□ -0.42
CCDC144B-201ENST00000285176 TMEM132EQ6IEE7 984 aa12.4□□□□□ -0.43
CCDC144B-201ENST00000285176 WDR7Q9Y4E6 1490 aa12.39□□□□□ -0.43
CCDC144B-201ENST00000285176 ROCK2O75116 1388 aaKnown RBP12.39□□□□□ -0.43
CCDC144B-201ENST00000285176 CEBPAP49715 358 aaPredicted RBP12.39□□□□□ -0.43
CCDC144B-201ENST00000285176 CCDC141Q6ZP82 1450 aa12.39□□□□□ -0.43
CCDC144B-201ENST00000285176 FBXO31Q5XUX0 539 aaPredicted RBP12.39□□□□□ -0.43
CCDC144B-201ENST00000285176 CC2D1BQ5T0F9 858 aaKnown RBP12.39□□□□□ -0.43
CCDC144B-201ENST00000285176 AKNAQ7Z591 1439 aa12.37□□□□□ -0.43
CCDC144B-201ENST00000285176 HNRNPUQ00839 825 aaKnown RBP eCLIP12.37□□□□□ -0.43
CCDC144B-201ENST00000285176 MRS2Q9HD23 443 aa12.37□□□□□ -0.43
CCDC144B-201ENST00000285176 PLCH2O75038 1416 aa12.37□□□□□ -0.43
CCDC144B-201ENST00000285176 ABCA8O94911 1581 aa12.36□□□□□ -0.43
CCDC144B-201ENST00000285176 LRRIQ1Q96JM4 1722 aa12.36□□□□□ -0.43
CCDC144B-201ENST00000285176 POGKQ9P215 609 aa12.35□□□□□ -0.43
CCDC144B-201ENST00000285176 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.34□□□□□ -0.43
CCDC144B-201ENST00000285176 SOX12O15370 315 aa12.34□□□□□ -0.43
CCDC144B-201ENST00000285176 CFAP70Q5T0N1 1121 aa12.34□□□□□ -0.43
CCDC144B-201ENST00000285176 CFAP65Q6ZU64 1925 aaKnown RBP12.34□□□□□ -0.43
CCDC144B-201ENST00000285176 C14orf37Q86TY3 774 aa12.33□□□□□ -0.43
CCDC144B-201ENST00000285176 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.33□□□□□ -0.44
CCDC144B-201ENST00000285176 KDM6BO15054 1643 aa12.32□□□□□ -0.44
CCDC144B-201ENST00000285176 TTC37Q6PGP7 1564 aa12.32□□□□□ -0.44
CCDC144B-201ENST00000285176 TIMELESSQ9UNS1 1208 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms