RNA–Protein interactions for RNA: ENST00000282928.4

ZIC1-201, Transcript of Zic family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZIC1, Length 5,241 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC1-201ENST00000282928 CCER2I3L3R5 266 aa23.5■■□□□ 1.35
ZIC1-201ENST00000282928 FTSJ3Q8IY81 847 aaKnown RBP23.5■■□□□ 1.35
ZIC1-201ENST00000282928 PPM1GO15355 546 aaPredicted RBP23.49■■□□□ 1.35
ZIC1-201ENST00000282928 MORC1Q86VD1 984 aa23.49■■□□□ 1.35
ZIC1-201ENST00000282928 TERF2IPQ9NYB0 399 aa23.48■■□□□ 1.35
ZIC1-201ENST00000282928 KTN1Q86UP2 1357 aaKnown RBP23.48■■□□□ 1.35
ZIC1-201ENST00000282928 DDRGK1Q96HY6 314 aa23.48■■□□□ 1.35
ZIC1-201ENST00000282928 MYOM3Q5VTT5 1437 aa23.48■■□□□ 1.35
ZIC1-201ENST00000282928 BECN1Q14457 450 aa23.47■■□□□ 1.35
ZIC1-201ENST00000282928 RALBP1Q15311 655 aa23.47■■□□□ 1.35
ZIC1-201ENST00000282928 ANP32EQ9BTT0 268 aa23.47■■□□□ 1.35
ZIC1-201ENST00000282928 ERICH3Q5RHP9 1530 aa23.47■■□□□ 1.35
ZIC1-201ENST00000282928 RAB3GAP2Q9H2M9 1393 aa23.46■■□□□ 1.35
ZIC1-201ENST00000282928 KANK4Q5T7N3 995 aaPredicted RBP23.45■■□□□ 1.34
ZIC1-201ENST00000282928 SIN3AQ96ST3 1273 aa23.45■■□□□ 1.34
ZIC1-201ENST00000282928 HDAC5Q9UQL6 1122 aa23.42■■□□□ 1.34
ZIC1-201ENST00000282928 HNRNPMP52272 730 aaKnown RBP eCLIP23.41■■□□□ 1.34
ZIC1-201ENST00000282928 CC2D2AQ9P2K1 1620 aa23.41■■□□□ 1.34
ZIC1-201ENST00000282928 VGFO15240 615 aaPredicted RBP23.41■■□□□ 1.34
ZIC1-201ENST00000282928 EFCAB5A4FU69 1503 aa23.4■■□□□ 1.34
ZIC1-201ENST00000282928 RTF1Q92541 710 aaKnown RBP23.39■■□□□ 1.33
ZIC1-201ENST00000282928 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.39■■□□□ 1.33
ZIC1-201ENST00000282928 CCDC144AA2RUR9 1427 aa23.38■■□□□ 1.33
ZIC1-201ENST00000282928 MIER1Q8N108 512 aa23.38■■□□□ 1.33
ZIC1-201ENST00000282928 PLEKHH2Q8IVE3 1493 aa23.37■■□□□ 1.33
ZIC1-201ENST00000282928 U2SURPO15042 1029 aaKnown RBP23.37■■□□□ 1.33
ZIC1-201ENST00000282928 PHLDB1Q86UU1 1377 aa23.36■■□□□ 1.33
ZIC1-201ENST00000282928 SYNJ2O15056 1496 aa23.36■■□□□ 1.33
ZIC1-201ENST00000282928 LAMC3Q9Y6N6 1575 aa23.34■■□□□ 1.33
ZIC1-201ENST00000282928 HIRIP3Q9BW71 556 aaPredicted RBP23.34■■□□□ 1.33
ZIC1-201ENST00000282928 RAD54L2Q9Y4B4 1467 aa23.33■■□□□ 1.33
ZIC1-201ENST00000282928 KIF21BO75037 1637 aa23.33■■□□□ 1.32
ZIC1-201ENST00000282928 NCLP19338 710 aaKnown RBP23.33■■□□□ 1.32
ZIC1-201ENST00000282928 CASKIN1Q8WXD9 1431 aa23.32■■□□□ 1.32
ZIC1-201ENST00000282928 IPO8O15397 1037 aaKnown RBP23.32■■□□□ 1.32
ZIC1-201ENST00000282928 LMOD3Q0VAK6 560 aa23.31■■□□□ 1.32
ZIC1-201ENST00000282928 FYCO1Q9BQS8 1478 aa23.31■■□□□ 1.32
ZIC1-201ENST00000282928 DNMBPQ6XZF7 1577 aa23.3■■□□□ 1.32
ZIC1-201ENST00000282928 GOLGA6L22H0YM25 854 aa23.3■■□□□ 1.32
ZIC1-201ENST00000282928 NPHP1O15259 732 aa23.3■■□□□ 1.32
ZIC1-201ENST00000282928 HSPA5P11021 654 aaKnown RBP23.29■■□□□ 1.32
ZIC1-201ENST00000282928 CYB5RLQ6IPT4 315 aa23.29■■□□□ 1.32
ZIC1-201ENST00000282928 CC2D1BQ5T0F9 858 aaKnown RBP23.27■■□□□ 1.32
ZIC1-201ENST00000282928 TOPBP1Q92547 1522 aa23.25■■□□□ 1.31
ZIC1-201ENST00000282928 SENP3Q9H4L4 574 aaPredicted RBP23.25■■□□□ 1.31
ZIC1-201ENST00000282928 STK26Q9P289 416 aa23.25■■□□□ 1.31
ZIC1-201ENST00000282928 ERICH6BQ5W0A0 696 aa23.24■■□□□ 1.31
ZIC1-201ENST00000282928 ARXQ96QS3 562 aa23.24■■□□□ 1.31
ZIC1-201ENST00000282928 LAS1LQ9Y4W2 734 aaKnown RBP23.24■■□□□ 1.31
ZIC1-201ENST00000282928 AQRO60306 1485 aaKnown RBP eCLIP23.23■■□□□ 1.31
ZIC1-201ENST00000282928 PLEKHG5O94827 1062 aa23.23■■□□□ 1.31
ZIC1-201ENST00000282928 TOP2BQ02880 1626 aa23.22■■□□□ 1.31
ZIC1-201ENST00000282928 CDK11BP21127 795 aaKnown RBP23.2■■□□□ 1.3
ZIC1-201ENST00000282928 CSB-PGBD3P0DP91 1061 aa23.18■■□□□ 1.3
ZIC1-201ENST00000282928 OS9Q13438 667 aaPredicted RBP23.18■■□□□ 1.3
ZIC1-201ENST00000282928 NGEFQ8N5V2 710 aa23.18■■□□□ 1.3
ZIC1-201ENST00000282928 PPP4R2Q9NY27 417 aa23.18■■□□□ 1.3
ZIC1-201ENST00000282928 FAM69CQ0P6D2 419 aa23.18■■□□□ 1.3
ZIC1-201ENST00000282928 EVC2Q86UK5 1308 aa23.17■■□□□ 1.3
ZIC1-201ENST00000282928 NGDNQ8NEJ9 315 aaKnown RBP23.17■■□□□ 1.3
ZIC1-201ENST00000282928 NEUROD2Q15784 382 aa23.17■■□□□ 1.3
ZIC1-201ENST00000282928 GOLGA2Q08379 1002 aa23.16■■□□□ 1.3
ZIC1-201ENST00000282928 FGD6Q6ZV73 1430 aa23.16■■□□□ 1.3
ZIC1-201ENST00000282928 PRG4Q92954 1404 aaPredicted RBP23.16■■□□□ 1.3
ZIC1-201ENST00000282928 TNNT2P45379 298 aaPredicted RBP23.14■■□□□ 1.3
ZIC1-201ENST00000282928 PDE3BQ13370 1112 aa23.14■■□□□ 1.29
ZIC1-201ENST00000282928 PAK3O75914 559 aaPredicted RBP23.14■■□□□ 1.29
ZIC1-201ENST00000282928 L3MBTL2Q969R5 705 aa23.11■■□□□ 1.29
ZIC1-201ENST00000282928 TMX4Q9H1E5 349 aaPredicted RBP23.11■■□□□ 1.29
ZIC1-201ENST00000282928 SAFB2Q14151 953 aaKnown RBP eCLIP23.11■■□□□ 1.29
ZIC1-201ENST00000282928 MIA2Q96PC5 1412 aa23.1■■□□□ 1.29
ZIC1-201ENST00000282928 NLRP13Q86W25 1043 aa23.1■■□□□ 1.29
ZIC1-201ENST00000282928 EHBP1L1Q8N3D4 1523 aa23.1■■□□□ 1.29
ZIC1-201ENST00000282928 KIF15Q9NS87 1388 aa23.1■■□□□ 1.29
ZIC1-201ENST00000282928 POLA1P09884 1462 aaPredicted RBP23.1■■□□□ 1.29
ZIC1-201ENST00000282928 RUSC2Q8N2Y8 1516 aa23.09■■□□□ 1.29
ZIC1-201ENST00000282928 MCCP23508 829 aa23.09■■□□□ 1.29
ZIC1-201ENST00000282928 ZRSR1Q15695 479 aaKnown RBP23.09■■□□□ 1.29
ZIC1-201ENST00000282928 LRRC9Q6ZRR7 1453 aa23.08■■□□□ 1.29
ZIC1-201ENST00000282928 HECW1Q76N89 1606 aa23.08■■□□□ 1.29
ZIC1-201ENST00000282928 U2AF1L5P0DN76 240 aaPredicted RBP23.07■■□□□ 1.28
ZIC1-201ENST00000282928 U2AF1Q01081 240 aaKnown RBP eCLIP23.07■■□□□ 1.28
ZIC1-201ENST00000282928 STK31Q9BXU1 1019 aa23.07■■□□□ 1.28
ZIC1-201ENST00000282928 PRDM2Q13029 1718 aa23.07■■□□□ 1.28
ZIC1-201ENST00000282928 KIAA0586Q9BVV6 1533 aa23.07■■□□□ 1.28
ZIC1-201ENST00000282928 POGZQ7Z3K3 1410 aa23.06■■□□□ 1.28
ZIC1-201ENST00000282928 ARHGAP5Q13017 1502 aa23.06■■□□□ 1.28
ZIC1-201ENST00000282928 FRAT1Q92837 279 aaPredicted RBP23.06■■□□□ 1.28
ZIC1-201ENST00000282928 CGNL1Q0VF96 1302 aa23.05■■□□□ 1.28
ZIC1-201ENST00000282928 ABCA10Q8WWZ4 1543 aa23.05■■□□□ 1.28
ZIC1-201ENST00000282928 DHX57Q6P158 1386 aaKnown RBP23.03■■□□□ 1.28
ZIC1-201ENST00000282928 SNAPC4Q5SXM2 1469 aa23.03■■□□□ 1.28
ZIC1-201ENST00000282928 AMPHP49418 695 aa23.02■■□□□ 1.28
ZIC1-201ENST00000282928 MAGI1Q96QZ7 1491 aaPredicted RBP23.02■■□□□ 1.28
ZIC1-201ENST00000282928 RRBP1Q9P2E9 1410 aaKnown RBP23.02■■□□□ 1.28
ZIC1-201ENST00000282928 PEG3Q9GZU2 1588 aa23.02■■□□□ 1.28
ZIC1-201ENST00000282928 PRXQ9BXM0 1461 aa23.02■■□□□ 1.28
ZIC1-201ENST00000282928 HFM1A2PYH4 1435 aa23.02■■□□□ 1.28
ZIC1-201ENST00000282928 CUL7Q14999 1698 aa23.02■■□□□ 1.28
ZIC1-201ENST00000282928 ANKRD50Q9ULJ7 1429 aa23.01■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 73.5 ms