RNA–Protein interactions for RNA: ENST00000282223.11

SPOCK1-201, Transcript of SPARC (osteonectin), cwcv and kazal like domains proteoglycan 1, humanhuman

TSL 5 BASIC

Gene SPOCK1, Length 4,488 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPOCK1-201ENST00000282223 PDCL3Q9H2J4 239 aa10.02□□□□□ -0.81
SPOCK1-201ENST00000282223 MS4A1P11836 297 aa10.01□□□□□ -0.81
SPOCK1-201ENST00000282223 RUSC2Q8N2Y8 1516 aa10.01□□□□□ -0.81
SPOCK1-201ENST00000282223 CRBNQ96SW2 442 aa10.01□□□□□ -0.81
SPOCK1-201ENST00000282223 VGLL3A8MV65 326 aa10.01□□□□□ -0.81
SPOCK1-201ENST00000282223 TPRNQ4KMQ1 711 aa10□□□□□ -0.81
SPOCK1-201ENST00000282223 XRCC6P12956 609 aaKnown RBP eCLIP10□□□□□ -0.81
SPOCK1-201ENST00000282223 VPS8Q8N3P4 1428 aa10□□□□□ -0.81
SPOCK1-201ENST00000282223 FAM161AQ3B820 660 aa9.99□□□□□ -0.81
SPOCK1-201ENST00000282223 ABCC8Q09428 1581 aa9.99□□□□□ -0.81
SPOCK1-201ENST00000282223 PTMAP06454 111 aaKnown RBP9.99□□□□□ -0.81
SPOCK1-201ENST00000282223 CLCN1P35523 988 aa9.98□□□□□ -0.81
SPOCK1-201ENST00000282223 NAP1L2Q9ULW6 460 aaPredicted RBP9.98□□□□□ -0.81
SPOCK1-201ENST00000282223 WDR97A6NE52 1622 aa9.98□□□□□ -0.81
SPOCK1-201ENST00000282223 FOXD4L1Q9NU39 408 aa9.97□□□□□ -0.81
SPOCK1-201ENST00000282223 RRP7BPQ9NSQ0 103 aa9.97□□□□□ -0.81
SPOCK1-201ENST00000282223 TPM2P07951 284 aa9.96□□□□□ -0.81
SPOCK1-201ENST00000282223 FOXD1Q16676 465 aa9.95□□□□□ -0.82
SPOCK1-201ENST00000282223 GOLGA6L2Q8N9W4 650 aaPredicted RBP9.95□□□□□ -0.82
SPOCK1-201ENST00000282223 SCRIBQ14160 1630 aa9.95□□□□□ -0.82
SPOCK1-201ENST00000282223 CDCA7LQ96GN5 454 aa9.95□□□□□ -0.82
SPOCK1-201ENST00000282223 E9PSI1 815 aa9.94□□□□□ -0.82
SPOCK1-201ENST00000282223 IGSF3O75054 1194 aa9.94□□□□□ -0.82
SPOCK1-201ENST00000282223 CHMP4AQ9BY43 222 aa9.94□□□□□ -0.82
SPOCK1-201ENST00000282223 SETD5Q9C0A6 1442 aa9.94□□□□□ -0.82
SPOCK1-201ENST00000282223 TRAK2O60296 914 aa9.94□□□□□ -0.82
SPOCK1-201ENST00000282223 MRE11P49959 708 aa9.93□□□□□ -0.82
SPOCK1-201ENST00000282223 MPNDQ8N594 471 aa9.92□□□□□ -0.82
SPOCK1-201ENST00000282223 PLCB2Q00722 1185 aa9.92□□□□□ -0.82
SPOCK1-201ENST00000282223 GRPEL1Q9HAV7 217 aa9.91□□□□□ -0.82
SPOCK1-201ENST00000282223 ABCC9O60706 1549 aa9.91□□□□□ -0.82
SPOCK1-201ENST00000282223 CBX1P83916 185 aa9.91□□□□□ -0.82
SPOCK1-201ENST00000282223 CALD1Q05682 793 aaKnown RBP9.91□□□□□ -0.82
SPOCK1-201ENST00000282223 ARID3CA6NKF2 412 aa9.91□□□□□ -0.82
SPOCK1-201ENST00000282223 KDM2AQ9Y2K7 1162 aa9.9□□□□□ -0.82
SPOCK1-201ENST00000282223 NACADO15069 1562 aa9.9□□□□□ -0.82
SPOCK1-201ENST00000282223 AEBP1Q8IUX7 1158 aa9.9□□□□□ -0.82
SPOCK1-201ENST00000282223 UQCRHLA0A096LP55 91 aa9.9□□□□□ -0.83
SPOCK1-201ENST00000282223 UQCRHP07919 91 aa9.9□□□□□ -0.83
SPOCK1-201ENST00000282223 ZNF771Q7L3S4 317 aaPredicted RBP9.9□□□□□ -0.83
SPOCK1-201ENST00000282223 MFAP1P55081 439 aaKnown RBP9.88□□□□□ -0.83
SPOCK1-201ENST00000282223 PDZRN4Q6ZMN7 1036 aaPredicted RBP9.88□□□□□ -0.83
SPOCK1-201ENST00000282223 CGNQ9P2M7 1197 aaKnown RBP9.88□□□□□ -0.83
SPOCK1-201ENST00000282223 GOLGA6L22H0YM25 854 aa9.88□□□□□ -0.83
SPOCK1-201ENST00000282223 HSP90AB1P08238 724 aaKnown RBP9.88□□□□□ -0.83
SPOCK1-201ENST00000282223 XPCQ01831 940 aaPredicted RBP9.88□□□□□ -0.83
SPOCK1-201ENST00000282223 WDR43Q15061 677 aaKnown RBP eCLIP9.88□□□□□ -0.83
SPOCK1-201ENST00000282223 MCM4P33991 863 aa9.87□□□□□ -0.83
SPOCK1-201ENST00000282223 CC2D1BQ5T0F9 858 aaKnown RBP9.87□□□□□ -0.83
SPOCK1-201ENST00000282223 C20orf194Q5TEA3 1177 aa9.86□□□□□ -0.83
SPOCK1-201ENST00000282223 L3MBTL2Q969R5 705 aa9.86□□□□□ -0.83
SPOCK1-201ENST00000282223 MAP7D2Q96T17 732 aa9.86□□□□□ -0.83
SPOCK1-201ENST00000282223 CEP164Q9UPV0 1460 aa9.86□□□□□ -0.83
SPOCK1-201ENST00000282223 HSCBQ8IWL3 235 aa9.86□□□□□ -0.83
SPOCK1-201ENST00000282223 CENPQQ7L2Z9 268 aaPredicted RBP9.85□□□□□ -0.83
SPOCK1-201ENST00000282223 SLC4A1APQ9BWU0 796 aaKnown RBP9.85□□□□□ -0.83
SPOCK1-201ENST00000282223 NASPP49321 788 aaPredicted RBP9.84□□□□□ -0.83
SPOCK1-201ENST00000282223 TRERF1Q96PN7 1200 aa9.84□□□□□ -0.83
SPOCK1-201ENST00000282223 DDX49Q9Y6V7 483 aaKnown RBP9.84□□□□□ -0.83
SPOCK1-201ENST00000282223 TNNT3P45378 269 aaPredicted RBP9.84□□□□□ -0.83
SPOCK1-201ENST00000282223 NEUROD2Q15784 382 aa9.83□□□□□ -0.84
SPOCK1-201ENST00000282223 SMG6Q86US8 1419 aaKnown RBP9.83□□□□□ -0.84
SPOCK1-201ENST00000282223 CECR2Q9BXF3 1484 aa9.83□□□□□ -0.84
SPOCK1-201ENST00000282223 SPDYE4A6NLX3 237 aa9.83□□□□□ -0.84
SPOCK1-201ENST00000282223 TAF7LQ5H9L4 462 aa9.83□□□□□ -0.84
SPOCK1-201ENST00000282223 CHMP5Q9NZZ3 219 aa9.82□□□□□ -0.84
SPOCK1-201ENST00000282223 FAM177BA6PVY3 158 aa9.82□□□□□ -0.84
SPOCK1-201ENST00000282223 GBP4Q96PP9 640 aa9.81□□□□□ -0.84
SPOCK1-201ENST00000282223 ZSCAN30Q86W11 494 aa9.81□□□□□ -0.84
SPOCK1-201ENST00000282223 KTN1Q86UP2 1357 aaKnown RBP9.81□□□□□ -0.84
SPOCK1-201ENST00000282223 ERBB4Q15303 1308 aa9.81□□□□□ -0.84
SPOCK1-201ENST00000282223 RNF214Q8ND24 703 aa9.8□□□□□ -0.84
SPOCK1-201ENST00000282223 TSC1Q92574 1164 aa9.8□□□□□ -0.84
SPOCK1-201ENST00000282223 KIF7Q2M1P5 1343 aa9.8□□□□□ -0.84
SPOCK1-201ENST00000282223 FOXD4L5Q5VV16 416 aaPredicted RBP9.8□□□□□ -0.84
SPOCK1-201ENST00000282223 FOXD4L4Q8WXT5 416 aaPredicted RBP9.8□□□□□ -0.84
SPOCK1-201ENST00000282223 PPP4R3BQ5MIZ7 849 aa9.8□□□□□ -0.84
SPOCK1-201ENST00000282223 DDX11L8A8MPP1 907 aa9.8□□□□□ -0.84
SPOCK1-201ENST00000282223 CERS3Q8IU89 383 aa9.8□□□□□ -0.84
SPOCK1-201ENST00000282223 CLUAP1Q96AJ1 413 aa9.8□□□□□ -0.84
SPOCK1-201ENST00000282223 PNISRQ8TF01 805 aaKnown RBP9.79□□□□□ -0.84
SPOCK1-201ENST00000282223 SEC24BO95487 1268 aa9.79□□□□□ -0.84
SPOCK1-201ENST00000282223 PRDM4Q9UKN5 801 aa9.79□□□□□ -0.84
SPOCK1-201ENST00000282223 CCDC7Q96M83 1385 aa9.79□□□□□ -0.84
SPOCK1-201ENST00000282223 CNTLNQ9NXG0 1405 aa9.78□□□□□ -0.84
SPOCK1-201ENST00000282223 ZBTB22O15209 634 aa9.78□□□□□ -0.84
SPOCK1-201ENST00000282223 C8orf34Q49A92 452 aa9.78□□□□□ -0.84
SPOCK1-201ENST00000282223 TBC1D2Q9BYX2 928 aa9.77□□□□□ -0.85
SPOCK1-201ENST00000282223 COG6Q9Y2V7 657 aa9.77□□□□□ -0.85
SPOCK1-201ENST00000282223 RAPGEF2Q9Y4G8 1499 aa9.77□□□□□ -0.85
SPOCK1-201ENST00000282223 KCNJ4P48050 445 aa9.76□□□□□ -0.85
SPOCK1-201ENST00000282223 GTF2E1P29083 439 aaPredicted RBP9.76□□□□□ -0.85
SPOCK1-201ENST00000282223 FOXD4L6Q3SYB3 417 aaPredicted RBP9.76□□□□□ -0.85
SPOCK1-201ENST00000282223 FOXD4L3Q6VB84 417 aaPredicted RBP9.76□□□□□ -0.85
SPOCK1-201ENST00000282223 STAC3Q96MF2 364 aa9.76□□□□□ -0.85
SPOCK1-201ENST00000282223 KIAA2012Q0VF49 1180 aa9.76□□□□□ -0.85
SPOCK1-201ENST00000282223 MTERF4Q7Z6M4 381 aaKnown RBP9.76□□□□□ -0.85
SPOCK1-201ENST00000282223 PABPN1Q86U42 306 aaKnown RBP eCLIP9.76□□□□□ -0.85
SPOCK1-201ENST00000282223 SMAP1Q8IYB5 467 aaPredicted RBP9.76□□□□□ -0.85
SPOCK1-201ENST00000282223 CARD11Q9BXL7 1154 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms