RNA–Protein interactions for RNA: ENST00000281821.6

EPHA4-201, Transcript of EPH receptor A4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EPHA4, Length 6,346 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-201ENST00000281821 CEP170Q5SW79 1584 aa10.87□□□□□ -0.67
EPHA4-201ENST00000281821 ZNF326Q5BKZ1 582 aaKnown RBP10.87□□□□□ -0.67
EPHA4-201ENST00000281821 TIAM1Q13009 1591 aa10.87□□□□□ -0.67
EPHA4-201ENST00000281821 WASHC2CQ9Y4E1 1318 aa10.86□□□□□ -0.67
EPHA4-201ENST00000281821 NUP155O75694 1391 aa10.86□□□□□ -0.67
EPHA4-201ENST00000281821 HNRNPMP52272 730 aaKnown RBP eCLIP10.86□□□□□ -0.67
EPHA4-201ENST00000281821 GGT6Q6P531 493 aa10.86□□□□□ -0.67
EPHA4-201ENST00000281821 WDR7Q9Y4E6 1490 aa10.86□□□□□ -0.67
EPHA4-201ENST00000281821 KIF14Q15058 1648 aa10.85□□□□□ -0.67
EPHA4-201ENST00000281821 DNAJC5Q9H3Z4 198 aa10.84□□□□□ -0.67
EPHA4-201ENST00000281821 DENND4BO75064 1496 aaPredicted RBP10.84□□□□□ -0.67
EPHA4-201ENST00000281821 CTTNBP2Q8WZ74 1663 aa10.84□□□□□ -0.67
EPHA4-201ENST00000281821 SCAPERQ9BY12 1400 aa10.83□□□□□ -0.68
EPHA4-201ENST00000281821 KIAA1107Q9UPP5 1409 aa10.83□□□□□ -0.68
EPHA4-201ENST00000281821 EID1Q9Y6B2 187 aa10.83□□□□□ -0.68
EPHA4-201ENST00000281821 KIF15Q9NS87 1388 aa10.83□□□□□ -0.68
EPHA4-201ENST00000281821 ASXL2Q76L83 1435 aa10.83□□□□□ -0.68
EPHA4-201ENST00000281821 RAPGEF6Q8TEU7 1601 aa10.83□□□□□ -0.68
EPHA4-201ENST00000281821 ROCK1Q13464 1354 aa10.82□□□□□ -0.68
EPHA4-201ENST00000281821 AKNAQ7Z591 1439 aa10.82□□□□□ -0.68
EPHA4-201ENST00000281821 PLCH2O75038 1416 aa10.81□□□□□ -0.68
EPHA4-201ENST00000281821 DISP1Q96F81 1524 aa10.81□□□□□ -0.68
EPHA4-201ENST00000281821 SUPT6HQ7KZ85 1726 aaKnown RBP10.81□□□□□ -0.68
EPHA4-201ENST00000281821 CCDC141Q6ZP82 1450 aa10.81□□□□□ -0.68
EPHA4-201ENST00000281821 RRBP1Q9P2E9 1410 aaKnown RBP10.81□□□□□ -0.68
EPHA4-201ENST00000281821 ATP10BO94823 1461 aa10.81□□□□□ -0.68
EPHA4-201ENST00000281821 ABCF1Q8NE71 845 aaKnown RBP eCLIP10.8□□□□□ -0.68
EPHA4-201ENST00000281821 ANKRD50Q9ULJ7 1429 aa10.8□□□□□ -0.68
EPHA4-201ENST00000281821 ADGRL1O94910 1474 aa10.79□□□□□ -0.68
EPHA4-201ENST00000281821 NUP153P49790 1475 aaKnown RBP10.79□□□□□ -0.68
EPHA4-201ENST00000281821 NEO1Q92859 1461 aa10.78□□□□□ -0.68
EPHA4-201ENST00000281821 PKD2Q13563 968 aa10.78□□□□□ -0.68
EPHA4-201ENST00000281821 MLECQ14165 292 aa10.77□□□□□ -0.68
EPHA4-201ENST00000281821 KDM5BQ9UGL1 1544 aa10.77□□□□□ -0.69
EPHA4-201ENST00000281821 SAMD9Q5K651 1589 aa10.77□□□□□ -0.69
EPHA4-201ENST00000281821 C9orf84Q5VXU9 1444 aa10.77□□□□□ -0.69
EPHA4-201ENST00000281821 ARHGEF11O15085 1522 aa10.77□□□□□ -0.69
EPHA4-201ENST00000281821 HFM1A2PYH4 1435 aa10.77□□□□□ -0.69
EPHA4-201ENST00000281821 FANCAO15360 1455 aa10.76□□□□□ -0.69
EPHA4-201ENST00000281821 PCF11O94913 1555 aaKnown RBP10.76□□□□□ -0.69
EPHA4-201ENST00000281821 SLC52A1Q9NWF4 448 aa10.76□□□□□ -0.69
EPHA4-201ENST00000281821 NEFMP07197 916 aa10.76□□□□□ -0.69
EPHA4-201ENST00000281821 MPHOSPH9Q99550 1183 aa10.75□□□□□ -0.69
EPHA4-201ENST00000281821 VGFO15240 615 aaPredicted RBP10.75□□□□□ -0.69
EPHA4-201ENST00000281821 POLR3GLQ9BT43 218 aa10.75□□□□□ -0.69
EPHA4-201ENST00000281821 ABCC10Q5T3U5 1492 aa10.75□□□□□ -0.69
EPHA4-201ENST00000281821 EIF4G2P78344 907 aaKnown RBP eCLIP10.74□□□□□ -0.69
EPHA4-201ENST00000281821 ZNF518AQ6AHZ1 1483 aa10.74□□□□□ -0.69
EPHA4-201ENST00000281821 CDK13Q14004 1512 aaKnown RBP10.74□□□□□ -0.69
EPHA4-201ENST00000281821 MYT1Q01538 1121 aa10.74□□□□□ -0.69
EPHA4-201ENST00000281821 RAB3GAP2Q9H2M9 1393 aa10.73□□□□□ -0.69
EPHA4-201ENST00000281821 CENPBP07199 599 aaPredicted RBP10.73□□□□□ -0.69
EPHA4-201ENST00000281821 CCDC144AA2RUR9 1427 aa10.73□□□□□ -0.69
EPHA4-201ENST00000281821 RTEL1-TNFRSF6BF6WH68 1400 aa10.73□□□□□ -0.69
EPHA4-201ENST00000281821 AFAP1Q8N556 730 aa10.73□□□□□ -0.69
EPHA4-201ENST00000281821 EIF3AQ14152 1382 aaKnown RBP10.72□□□□□ -0.69
EPHA4-201ENST00000281821 CLASP1Q7Z460 1538 aa10.71□□□□□ -0.69
EPHA4-201ENST00000281821 PLPPR3Q6T4P5 718 aa10.71□□□□□ -0.7
EPHA4-201ENST00000281821 DAPK1P53355 1430 aa10.7□□□□□ -0.7
EPHA4-201ENST00000281821 C14orf37Q86TY3 774 aa10.7□□□□□ -0.7
EPHA4-201ENST00000281821 RPGRIP1LQ68CZ1 1315 aa10.7□□□□□ -0.7
EPHA4-201ENST00000281821 GPATCH8Q9UKJ3 1502 aaKnown RBP10.7□□□□□ -0.7
EPHA4-201ENST00000281821 THEMISQ8N1K5 641 aaPredicted RBP10.69□□□□□ -0.7
EPHA4-201ENST00000281821 ABCA8O94911 1581 aa10.69□□□□□ -0.7
EPHA4-201ENST00000281821 DHX29Q7Z478 1369 aaKnown RBP10.69□□□□□ -0.7
EPHA4-201ENST00000281821 MAGI2Q86UL8 1455 aa10.68□□□□□ -0.7
EPHA4-201ENST00000281821 CNTLNQ9NXG0 1405 aa10.68□□□□□ -0.7
EPHA4-201ENST00000281821 POGKQ9P215 609 aa10.68□□□□□ -0.7
EPHA4-201ENST00000281821 SHANK2Q9UPX8 1470 aa10.68□□□□□ -0.7
EPHA4-201ENST00000281821 ITSN2Q9NZM3 1697 aa10.68□□□□□ -0.7
EPHA4-201ENST00000281821 ARAP3Q8WWN8 1544 aa10.68□□□□□ -0.7
EPHA4-201ENST00000281821 CAMSAP2Q08AD1 1489 aa10.68□□□□□ -0.7
EPHA4-201ENST00000281821 ANP32CO43423 234 aa10.67□□□□□ -0.7
EPHA4-201ENST00000281821 CHD1O14646 1710 aa10.67□□□□□ -0.7
EPHA4-201ENST00000281821 ZNF316A6NFI3 1004 aaPredicted RBP10.67□□□□□ -0.7
EPHA4-201ENST00000281821 CFAP74Q9C0B2 1584 aa10.66□□□□□ -0.7
EPHA4-201ENST00000281821 KDM2AQ9Y2K7 1162 aa10.66□□□□□ -0.7
EPHA4-201ENST00000281821 RGL3Q3MIN7 710 aa10.66□□□□□ -0.7
EPHA4-201ENST00000281821 AEBP2Q6ZN18 517 aaPredicted RBP10.66□□□□□ -0.7
EPHA4-201ENST00000281821 CARD11Q9BXL7 1154 aa10.65□□□□□ -0.7
EPHA4-201ENST00000281821 ZNF644Q9H582 1327 aaPredicted RBP10.65□□□□□ -0.7
EPHA4-201ENST00000281821 RAPGEF3O95398 923 aa10.64□□□□□ -0.71
EPHA4-201ENST00000281821 DMRT2Q9Y5R5 561 aa10.64□□□□□ -0.71
EPHA4-201ENST00000281821 MAPKBP1O60336 1514 aa10.64□□□□□ -0.71
EPHA4-201ENST00000281821 ERBINQ96RT1 1412 aa10.64□□□□□ -0.71
EPHA4-201ENST00000281821 DCAF11Q8TEB1 546 aa10.63□□□□□ -0.71
EPHA4-201ENST00000281821 TCOF1Q13428 1488 aaKnown RBP10.63□□□□□ -0.71
EPHA4-201ENST00000281821 ANKRD30BQ9BXX2 1392 aa10.62□□□□□ -0.71
EPHA4-201ENST00000281821 TMF1P82094 1093 aa10.62□□□□□ -0.71
EPHA4-201ENST00000281821 NCOA1Q15788 1441 aa10.62□□□□□ -0.71
EPHA4-201ENST00000281821 MAGI3Q5TCQ9 1506 aa10.62□□□□□ -0.71
EPHA4-201ENST00000281821 ABCC5O15440 1437 aa10.61□□□□□ -0.71
EPHA4-201ENST00000281821 DUOX2Q9NRD8 1548 aa10.6□□□□□ -0.71
EPHA4-201ENST00000281821 A2MP01023 1474 aa10.6□□□□□ -0.71
EPHA4-201ENST00000281821 PTPN23Q9H3S7 1636 aa10.59□□□□□ -0.71
EPHA4-201ENST00000281821 SHROOM2Q13796 1616 aa10.59□□□□□ -0.71
EPHA4-201ENST00000281821 ATP10AO60312 1499 aa10.58□□□□□ -0.72
EPHA4-201ENST00000281821 NEFLP07196 543 aa10.58□□□□□ -0.72
EPHA4-201ENST00000281821 CFAP43Q8NDM7 1665 aa10.58□□□□□ -0.72
EPHA4-201ENST00000281821 ANKLE2Q86XL3 938 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms