RNA–Protein interactions for RNA: ENST00000278980.10

COMMD7-201, Transcript of COMM domain containing 7, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COMMD7, Length 1,900 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD7-201ENST00000278980 ABCC5O15440 1437 aa37.39■■■■□ 3.58
COMMD7-201ENST00000278980 ROCK1Q13464 1354 aa37.36■■■■□ 3.57
COMMD7-201ENST00000278980 CDC42BPAQ5VT25 1732 aa37.33■■■■□ 3.57
COMMD7-201ENST00000278980 UHRF1BP1LA0JNW5 1464 aa37.27■■■■□ 3.56
COMMD7-201ENST00000278980 ZNF777Q9ULD5 760 aaPredicted RBP37.26■■■■□ 3.55
COMMD7-201ENST00000278980 KDM6BO15054 1643 aa37.2■■■■□ 3.55
COMMD7-201ENST00000278980 DIEXFQ68CQ4 756 aaKnown RBP37.2■■■■□ 3.55
COMMD7-201ENST00000278980 CROCC2H7BZ55 1655 aa37.2■■■■□ 3.55
COMMD7-201ENST00000278980 ACIN1Q9UKV3 1341 aaKnown RBP37.2■■■■□ 3.54
COMMD7-201ENST00000278980 SIN3AQ96ST3 1273 aa37.19■■■■□ 3.54
COMMD7-201ENST00000278980 ADGBQ8N7X0 1667 aa37.18■■■■□ 3.54
COMMD7-201ENST00000278980 TIMELESSQ9UNS1 1208 aa37.16■■■■□ 3.54
COMMD7-201ENST00000278980 NEUROD1Q13562 356 aa37.15■■■■□ 3.54
COMMD7-201ENST00000278980 ZCCHC11Q5TAX3 1644 aaKnown RBP37.14■■■■□ 3.54
COMMD7-201ENST00000278980 PREX2Q70Z35 1606 aa37.14■■■■□ 3.54
COMMD7-201ENST00000278980 KDM5BQ9UGL1 1544 aa37.14■■■■□ 3.54
COMMD7-201ENST00000278980 ADGRL2O95490 1459 aa37.13■■■■□ 3.53
COMMD7-201ENST00000278980 TRIM52Q96A61 297 aa37.11■■■■□ 3.53
COMMD7-201ENST00000278980 SHANK2Q9UPX8 1470 aa37.08■■■■□ 3.53
COMMD7-201ENST00000278980 NCOA1Q15788 1441 aa37.08■■■■□ 3.53
COMMD7-201ENST00000278980 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP37.08■■■■□ 3.53
COMMD7-201ENST00000278980 TTC37Q6PGP7 1564 aa37.07■■■■□ 3.53
COMMD7-201ENST00000278980 CDC42BPBQ9Y5S2 1711 aa37.07■■■■□ 3.52
COMMD7-201ENST00000278980 ANKRD30AQ9BXX3 1397 aa37.04■■■■□ 3.52
COMMD7-201ENST00000278980 ARHGEF5Q12774 1597 aa37.04■■■■□ 3.52
COMMD7-201ENST00000278980 OSCARQ8IYS5 282 aa37.04■■■■□ 3.52
COMMD7-201ENST00000278980 SAMD9LQ8IVG5 1584 aa37.01■■■■□ 3.52
COMMD7-201ENST00000278980 C9orf84Q5VXU9 1444 aa36.99■■■■□ 3.51
COMMD7-201ENST00000278980 DENND4BO75064 1496 aaPredicted RBP36.98■■■■□ 3.51
COMMD7-201ENST00000278980 MYO5CQ9NQX4 1742 aa36.98■■■■□ 3.51
COMMD7-201ENST00000278980 ARHGAP5Q13017 1502 aa36.97■■■■□ 3.51
COMMD7-201ENST00000278980 MPHOSPH9Q99550 1183 aa36.97■■■■□ 3.51
COMMD7-201ENST00000278980 MBD5Q9P267 1494 aa36.96■■■■□ 3.51
COMMD7-201ENST00000278980 TONSLQ96HA7 1378 aa36.94■■■■□ 3.5
COMMD7-201ENST00000278980 TSPY4P0CV99 314 aa36.93■■■■□ 3.5
COMMD7-201ENST00000278980 TSPY10P0CW01 314 aa36.93■■■■□ 3.5
COMMD7-201ENST00000278980 KCNH8Q96L42 1107 aa36.93■■■■□ 3.5
COMMD7-201ENST00000278980 CCDC141Q6ZP82 1450 aa36.92■■■■□ 3.5
COMMD7-201ENST00000278980 HNRNPMP52272 730 aaKnown RBP eCLIP36.92■■■■□ 3.5
COMMD7-201ENST00000278980 RSPH4AQ5TD94 716 aa36.91■■■■□ 3.5
COMMD7-201ENST00000278980 PLEKHH2Q8IVE3 1493 aa36.87■■■■□ 3.49
COMMD7-201ENST00000278980 PPP1R15AO75807 674 aaPredicted RBP36.86■■■■□ 3.49
COMMD7-201ENST00000278980 ANKRD50Q9ULJ7 1429 aa36.85■■■■□ 3.49
COMMD7-201ENST00000278980 SYCP2Q9BX26 1530 aa36.85■■■■□ 3.49
COMMD7-201ENST00000278980 PLCH2O75038 1416 aa36.84■■■■□ 3.49
COMMD7-201ENST00000278980 KIAA1107Q9UPP5 1409 aa36.82■■■■□ 3.48
COMMD7-201ENST00000278980 WDR7Q9Y4E6 1490 aa36.8■■■■□ 3.48
COMMD7-201ENST00000278980 SLC4A1APQ9BWU0 796 aaKnown RBP36.79■■■■□ 3.48
COMMD7-201ENST00000278980 PZPP20742 1482 aa36.78■■■■□ 3.48
COMMD7-201ENST00000278980 KIF15Q9NS87 1388 aa36.77■■■■□ 3.48
COMMD7-201ENST00000278980 MAST1Q9Y2H9 1570 aa36.77■■■■□ 3.48
COMMD7-201ENST00000278980 EFCAB2Q5VUJ9 269 aa36.73■■■■□ 3.47
COMMD7-201ENST00000278980 ANKRD30BQ9BXX2 1392 aa36.72■■■■□ 3.47
COMMD7-201ENST00000278980 ARAP3Q8WWN8 1544 aa36.72■■■■□ 3.47
COMMD7-201ENST00000278980 FOXD1Q16676 465 aa36.71■■■■□ 3.47
COMMD7-201ENST00000278980 ABCC1P33527 1531 aa36.66■■■■□ 3.46
COMMD7-201ENST00000278980 ARHGEF12Q9NZN5 1544 aa36.64■■■■□ 3.46
COMMD7-201ENST00000278980 KDM5DQ9BY66 1539 aa36.64■■■■□ 3.46
COMMD7-201ENST00000278980 ASXL2Q76L83 1435 aa36.64■■■■□ 3.46
COMMD7-201ENST00000278980 RPRD2Q5VT52 1461 aaKnown RBP36.62■■■■□ 3.45
COMMD7-201ENST00000278980 PLXNC1O60486 1568 aa36.62■■■■□ 3.45
COMMD7-201ENST00000278980 ABCA9Q8IUA7 1624 aa36.61■■■■□ 3.45
COMMD7-201ENST00000278980 NUP155O75694 1391 aa36.59■■■■□ 3.45
COMMD7-201ENST00000278980 NPM1P06748 294 aaKnown RBP eCLIP36.58■■■■□ 3.45
COMMD7-201ENST00000278980 PKD2Q13563 968 aa36.53■■■■□ 3.44
COMMD7-201ENST00000278980 MIER1Q8N108 512 aa36.51■■■■□ 3.43
COMMD7-201ENST00000278980 TRAPPC8Q9Y2L5 1435 aa36.49■■■■□ 3.43
COMMD7-201ENST00000278980 FANCAO15360 1455 aa36.48■■■■□ 3.43
COMMD7-201ENST00000278980 DUOX2Q9NRD8 1548 aa36.48■■■■□ 3.43
COMMD7-201ENST00000278980 L3MBTL2Q969R5 705 aa36.47■■■■□ 3.43
COMMD7-201ENST00000278980 TEX14Q8IWB6 1497 aa36.46■■■■□ 3.43
COMMD7-201ENST00000278980 UNC13BO14795 1591 aa36.44■■■■□ 3.42
COMMD7-201ENST00000278980 ERBINQ96RT1 1412 aa36.42■■■■□ 3.42
COMMD7-201ENST00000278980 FAM135AQ9P2D6 1515 aa36.41■■■■□ 3.42
COMMD7-201ENST00000278980 RTEL1-TNFRSF6BF6WH68 1400 aa36.4■■■■□ 3.42
COMMD7-201ENST00000278980 SPAG9O60271 1321 aaKnown RBP36.38■■■■□ 3.41
COMMD7-201ENST00000278980 ZFYVE16Q7Z3T8 1539 aa36.35■■■■□ 3.41
COMMD7-201ENST00000278980 ADGRL1O94910 1474 aa36.34■■■■□ 3.41
COMMD7-201ENST00000278980 AFAP1Q8N556 730 aa36.32■■■■□ 3.41
COMMD7-201ENST00000278980 IQGAP3Q86VI3 1631 aa36.29■■■■□ 3.4
COMMD7-201ENST00000278980 MAGI2Q86UL8 1455 aa36.29■■■■□ 3.4
COMMD7-201ENST00000278980 SCAPERQ9BY12 1400 aa36.29■■■■□ 3.4
COMMD7-201ENST00000278980 HIRIP3Q9BW71 556 aaPredicted RBP36.28■■■■□ 3.4
COMMD7-201ENST00000278980 INO80Q9ULG1 1556 aaPredicted RBP36.27■■■■□ 3.4
COMMD7-201ENST00000278980 ATP7AQ04656 1500 aa36.25■■■■□ 3.39
COMMD7-201ENST00000278980 CFAP74Q9C0B2 1584 aa36.25■■■■□ 3.39
COMMD7-201ENST00000278980 GRWD1Q9BQ67 446 aaKnown RBP eCLIP36.24■■■■□ 3.39
COMMD7-201ENST00000278980 CD109Q6YHK3 1445 aa36.24■■■■□ 3.39
COMMD7-201ENST00000278980 NBPF8Q3BBV2 869 aa36.2■■■■□ 3.39
COMMD7-201ENST00000278980 DDX10Q13206 875 aaKnown RBP36.17■■■■□ 3.38
COMMD7-201ENST00000278980 EIF4G2P78344 907 aaKnown RBP eCLIP36.16■■■■□ 3.38
COMMD7-201ENST00000278980 RIMBP3CA6NJZ7 1639 aa36.15■■■■□ 3.38
COMMD7-201ENST00000278980 RIMBP3BA6NNM3 1639 aa36.15■■■■□ 3.38
COMMD7-201ENST00000278980 RIMBP3Q9UFD9 1639 aa36.15■■■■□ 3.38
COMMD7-201ENST00000278980 HSPA5P11021 654 aaKnown RBP36.14■■■■□ 3.38
COMMD7-201ENST00000278980 ZNF518AQ6AHZ1 1483 aa36.13■■■■□ 3.37
COMMD7-201ENST00000278980 CENPBP07199 599 aaPredicted RBP36.11■■■■□ 3.37
COMMD7-201ENST00000278980 CYB5RLQ6IPT4 315 aa36.1■■■■□ 3.37
COMMD7-201ENST00000278980 MYT1LQ9UL68 1186 aa36.1■■■■□ 3.37
COMMD7-201ENST00000278980 CCDC144AA2RUR9 1427 aa36.1■■■■□ 3.37
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms