RNA–Protein interactions for RNA: ENST00000278426.7

SLC43A1-201, Transcript of solute carrier family 43 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC43A1, Length 2,598 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC43A1-201ENST00000278426 MIA2Q96PC5 1412 aa24.72■■□□□ 1.55
SLC43A1-201ENST00000278426 B4GALNT3Q6L9W6 998 aa24.72■■□□□ 1.55
SLC43A1-201ENST00000278426 IQGAP2Q13576 1575 aa24.72■■□□□ 1.55
SLC43A1-201ENST00000278426 CNTLNQ9NXG0 1405 aa24.71■■□□□ 1.55
SLC43A1-201ENST00000278426 NBPF8Q3BBV2 869 aa24.71■■□□□ 1.55
SLC43A1-201ENST00000278426 ZNF644Q9H582 1327 aaPredicted RBP24.7■■□□□ 1.54
SLC43A1-201ENST00000278426 ERICH6BQ5W0A0 696 aa24.69■■□□□ 1.54
SLC43A1-201ENST00000278426 CCDC7Q96M83 1385 aa24.68■■□□□ 1.54
SLC43A1-201ENST00000278426 PRKRIP1Q9H875 184 aaPredicted RBP24.68■■□□□ 1.54
SLC43A1-201ENST00000278426 WDR62O43379 1518 aa24.65■■□□□ 1.54
SLC43A1-201ENST00000278426 ANKRD30BQ9BXX2 1392 aa24.65■■□□□ 1.54
SLC43A1-201ENST00000278426 PBRM1Q86U86 1689 aa24.65■■□□□ 1.54
SLC43A1-201ENST00000278426 NCOA1Q15788 1441 aa24.65■■□□□ 1.54
SLC43A1-201ENST00000278426 MRS2Q9HD23 443 aa24.64■■□□□ 1.54
SLC43A1-201ENST00000278426 SLC4A1APQ9BWU0 796 aaKnown RBP24.64■■□□□ 1.53
SLC43A1-201ENST00000278426 DAPK1P53355 1430 aa24.62■■□□□ 1.53
SLC43A1-201ENST00000278426 ABCC5O15440 1437 aa24.6■■□□□ 1.53
SLC43A1-201ENST00000278426 ADAMTS12P58397 1594 aa24.6■■□□□ 1.53
SLC43A1-201ENST00000278426 RPRD2Q5VT52 1461 aaKnown RBP24.6■■□□□ 1.53
SLC43A1-201ENST00000278426 ZBED9Q6R2W3 1325 aa24.59■■□□□ 1.53
SLC43A1-201ENST00000278426 KIF7Q2M1P5 1343 aa24.58■■□□□ 1.53
SLC43A1-201ENST00000278426 ROCK1Q13464 1354 aa24.57■■□□□ 1.52
SLC43A1-201ENST00000278426 CNGB1Q14028 1251 aaPredicted RBP24.56■■□□□ 1.52
SLC43A1-201ENST00000278426 TEX14Q8IWB6 1497 aa24.55■■□□□ 1.52
SLC43A1-201ENST00000278426 SPATA31E1Q6ZUB1 1445 aa24.51■■□□□ 1.51
SLC43A1-201ENST00000278426 DNMT1P26358 1616 aaKnown RBP24.5■■□□□ 1.51
SLC43A1-201ENST00000278426 DEKP35659 375 aaKnown RBP24.5■■□□□ 1.51
SLC43A1-201ENST00000278426 ZNF608Q9ULD9 1512 aaPredicted RBP24.49■■□□□ 1.51
SLC43A1-201ENST00000278426 NUP153P49790 1475 aaKnown RBP24.49■■□□□ 1.51
SLC43A1-201ENST00000278426 POLR3GLQ9BT43 218 aa24.49■■□□□ 1.51
SLC43A1-201ENST00000278426 ZNF326Q5BKZ1 582 aaKnown RBP24.49■■□□□ 1.51
SLC43A1-201ENST00000278426 DISP1Q96F81 1524 aa24.47■■□□□ 1.51
SLC43A1-201ENST00000278426 PAK3O75914 559 aaPredicted RBP24.47■■□□□ 1.51
SLC43A1-201ENST00000278426 ZNF777Q9ULD5 760 aaPredicted RBP24.47■■□□□ 1.51
SLC43A1-201ENST00000278426 CFDP1Q9UEE9 299 aaPredicted RBP24.46■■□□□ 1.51
SLC43A1-201ENST00000278426 NOP58Q9Y2X3 529 aaKnown RBP24.45■■□□□ 1.5
SLC43A1-201ENST00000278426 PRG4Q92954 1404 aaPredicted RBP24.44■■□□□ 1.5
SLC43A1-201ENST00000278426 KIAA0556O60303 1618 aa24.44■■□□□ 1.5
SLC43A1-201ENST00000278426 MRC2Q9UBG0 1479 aa24.43■■□□□ 1.5
SLC43A1-201ENST00000278426 KIAA0586Q9BVV6 1533 aa24.43■■□□□ 1.5
SLC43A1-201ENST00000278426 NBR1Q14596 966 aa24.43■■□□□ 1.5
SLC43A1-201ENST00000278426 SENP3-EIF4A1A0A087X0R7 540 aa24.42■■□□□ 1.5
SLC43A1-201ENST00000278426 PZPP20742 1482 aa24.42■■□□□ 1.5
SLC43A1-201ENST00000278426 MYT1LQ9UL68 1186 aa24.41■■□□□ 1.5
SLC43A1-201ENST00000278426 RAPGEF6Q8TEU7 1601 aa24.39■■□□□ 1.49
SLC43A1-201ENST00000278426 PKD2Q13563 968 aa24.38■■□□□ 1.49
SLC43A1-201ENST00000278426 CAMSAP2Q08AD1 1489 aa24.37■■□□□ 1.49
SLC43A1-201ENST00000278426 SMG6Q86US8 1419 aaKnown RBP24.37■■□□□ 1.49
SLC43A1-201ENST00000278426 USP47Q96K76 1375 aa24.36■■□□□ 1.49
SLC43A1-201ENST00000278426 DHX29Q7Z478 1369 aaKnown RBP24.35■■□□□ 1.49
SLC43A1-201ENST00000278426 TROQ12816 1431 aaPredicted RBP24.34■■□□□ 1.49
SLC43A1-201ENST00000278426 POLR1AO95602 1720 aaPredicted RBP24.34■■□□□ 1.49
SLC43A1-201ENST00000278426 IFT140Q96RY7 1462 aa24.33■■□□□ 1.49
SLC43A1-201ENST00000278426 KIAA1107Q9UPP5 1409 aa24.33■■□□□ 1.48
SLC43A1-201ENST00000278426 NUDCQ9Y266 331 aa24.32■■□□□ 1.48
SLC43A1-201ENST00000278426 PLB1Q6P1J6 1458 aa24.32■■□□□ 1.48
SLC43A1-201ENST00000278426 CCDC136Q96JN2 1154 aa24.32■■□□□ 1.48
SLC43A1-201ENST00000278426 GPATCH8Q9UKJ3 1502 aaKnown RBP24.31■■□□□ 1.48
SLC43A1-201ENST00000278426 GRIN2AQ12879 1464 aa24.31■■□□□ 1.48
SLC43A1-201ENST00000278426 BCORL1Q5H9F3 1711 aa24.3■■□□□ 1.48
SLC43A1-201ENST00000278426 MBD5Q9P267 1494 aa24.29■■□□□ 1.48
SLC43A1-201ENST00000278426 FBLN2P98095 1184 aa24.28■■□□□ 1.48
SLC43A1-201ENST00000278426 RNF123Q5XPI4 1314 aa24.28■■□□□ 1.48
SLC43A1-201ENST00000278426 KIF14Q15058 1648 aa24.26■■□□□ 1.47
SLC43A1-201ENST00000278426 CHMP7Q8WUX9 453 aaPredicted RBP24.26■■□□□ 1.47
SLC43A1-201ENST00000278426 ANKRD30AQ9BXX3 1397 aa24.26■■□□□ 1.47
SLC43A1-201ENST00000278426 KDM2AQ9Y2K7 1162 aa24.24■■□□□ 1.47
SLC43A1-201ENST00000278426 ANKRD50Q9ULJ7 1429 aa24.23■■□□□ 1.47
SLC43A1-201ENST00000278426 IPO9Q96P70 1041 aaKnown RBP24.23■■□□□ 1.47
SLC43A1-201ENST00000278426 ANP32AP39687 249 aaKnown RBP24.22■■□□□ 1.47
SLC43A1-201ENST00000278426 CARD11Q9BXL7 1154 aa24.22■■□□□ 1.47
SLC43A1-201ENST00000278426 NUP155O75694 1391 aa24.22■■□□□ 1.47
SLC43A1-201ENST00000278426 ADGBQ8N7X0 1667 aa24.22■■□□□ 1.47
SLC43A1-201ENST00000278426 ADGRL2O95490 1459 aa24.21■■□□□ 1.47
SLC43A1-201ENST00000278426 TMC1Q8TDI8 760 aa24.21■■□□□ 1.47
SLC43A1-201ENST00000278426 ITSN2Q9NZM3 1697 aa24.2■■□□□ 1.47
SLC43A1-201ENST00000278426 PNISRQ8TF01 805 aaKnown RBP24.2■■□□□ 1.46
SLC43A1-201ENST00000278426 EIF4G3O43432 1585 aaKnown RBP24.19■■□□□ 1.46
SLC43A1-201ENST00000278426 KDM5CP41229 1560 aa24.19■■□□□ 1.46
SLC43A1-201ENST00000278426 JPH4Q96JJ6 628 aa24.17■■□□□ 1.46
SLC43A1-201ENST00000278426 ARID4BQ4LE39 1312 aaPredicted RBP24.17■■□□□ 1.46
SLC43A1-201ENST00000278426 ST20-MTHFSA0A0A6YYL1 179 aa24.16■■□□□ 1.46
SLC43A1-201ENST00000278426 PLEKHD1A6NEE1 506 aa24.16■■□□□ 1.46
SLC43A1-201ENST00000278426 ZBTB47Q9UFB7 747 aaPredicted RBP24.16■■□□□ 1.46
SLC43A1-201ENST00000278426 CROCC2H7BZ55 1655 aa24.14■■□□□ 1.46
SLC43A1-201ENST00000278426 CEP170Q5SW79 1584 aa24.14■■□□□ 1.46
SLC43A1-201ENST00000278426 DCAF11Q8TEB1 546 aa24.14■■□□□ 1.45
SLC43A1-201ENST00000278426 UHRF1BP1Q6BDS2 1440 aa24.12■■□□□ 1.45
SLC43A1-201ENST00000278426 TSPY4P0CV99 314 aa24.11■■□□□ 1.45
SLC43A1-201ENST00000278426 TSPY10P0CW01 314 aa24.11■■□□□ 1.45
SLC43A1-201ENST00000278426 ADCY10Q96PN6 1610 aa24.11■■□□□ 1.45
SLC43A1-201ENST00000278426 RALGAPBQ86X10 1494 aa24.11■■□□□ 1.45
SLC43A1-201ENST00000278426 C9orf84Q5VXU9 1444 aa24.11■■□□□ 1.45
SLC43A1-201ENST00000278426 HNRNPMP52272 730 aaKnown RBP eCLIP24.1■■□□□ 1.45
SLC43A1-201ENST00000278426 CARMIL2Q6F5E8 1435 aa24.1■■□□□ 1.45
SLC43A1-201ENST00000278426 ROCK2O75116 1388 aaKnown RBP24.1■■□□□ 1.45
SLC43A1-201ENST00000278426 RTL5Q5HYW3 569 aaPredicted RBP24.08■■□□□ 1.45
SLC43A1-201ENST00000278426 KIF15Q9NS87 1388 aa24.08■■□□□ 1.44
SLC43A1-201ENST00000278426 NPM2Q86SE8 214 aaKnown RBP24.07■■□□□ 1.44
SLC43A1-201ENST00000278426 SYNJ2O15056 1496 aa24.06■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms