RNA–Protein interactions for RNA: ENST00000277537.10

SEC16A-201, Transcript of SEC16 homolog A, endoplasmic reticulum export factor, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene SEC16A, Length 3,910 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC16A-201ENST00000277537 HECW1Q76N89 1606 aa12.4□□□□□ -0.42
SEC16A-201ENST00000277537 UACAQ9BZF9 1416 aa12.39□□□□□ -0.43
SEC16A-201ENST00000277537 CTTNBP2Q8WZ74 1663 aa12.39□□□□□ -0.43
SEC16A-201ENST00000277537 MYT1Q01538 1121 aa12.39□□□□□ -0.43
SEC16A-201ENST00000277537 TARBP1Q13395 1621 aaKnown RBP12.38□□□□□ -0.43
SEC16A-201ENST00000277537 TROQ12816 1431 aaPredicted RBP12.37□□□□□ -0.43
SEC16A-201ENST00000277537 ADAMTS12P58397 1594 aa12.37□□□□□ -0.43
SEC16A-201ENST00000277537 NAIPQ13075 1403 aa12.37□□□□□ -0.43
SEC16A-201ENST00000277537 PTPRKQ15262 1439 aa12.37□□□□□ -0.43
SEC16A-201ENST00000277537 MRS2Q9HD23 443 aa12.37□□□□□ -0.43
SEC16A-201ENST00000277537 SUPT6HQ7KZ85 1726 aaKnown RBP12.37□□□□□ -0.43
SEC16A-201ENST00000277537 HFM1A2PYH4 1435 aa12.37□□□□□ -0.43
SEC16A-201ENST00000277537 WDR62O43379 1518 aa12.35□□□□□ -0.43
SEC16A-201ENST00000277537 OSCARQ8IYS5 282 aa12.35□□□□□ -0.43
SEC16A-201ENST00000277537 EIF4G3O43432 1585 aaKnown RBP12.35□□□□□ -0.43
SEC16A-201ENST00000277537 THOC2Q8NI27 1593 aaKnown RBP12.35□□□□□ -0.43
SEC16A-201ENST00000277537 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.34□□□□□ -0.43
SEC16A-201ENST00000277537 MIA2Q96PC5 1412 aa12.34□□□□□ -0.43
SEC16A-201ENST00000277537 PLPPR3Q6T4P5 718 aa12.33□□□□□ -0.43
SEC16A-201ENST00000277537 SALL2Q9Y467 1007 aaPredicted RBP12.33□□□□□ -0.43
SEC16A-201ENST00000277537 FKBP8Q14318 412 aa12.32□□□□□ -0.44
SEC16A-201ENST00000277537 SPAG9O60271 1321 aaKnown RBP12.32□□□□□ -0.44
SEC16A-201ENST00000277537 GGT6Q6P531 493 aa12.32□□□□□ -0.44
SEC16A-201ENST00000277537 PBRM1Q86U86 1689 aa12.31□□□□□ -0.44
SEC16A-201ENST00000277537 KIF3BO15066 747 aa12.31□□□□□ -0.44
SEC16A-201ENST00000277537 RSPH4AQ5TD94 716 aa12.31□□□□□ -0.44
SEC16A-201ENST00000277537 CYB5RLQ6IPT4 315 aa12.31□□□□□ -0.44
SEC16A-201ENST00000277537 PTPN23Q9H3S7 1636 aa12.31□□□□□ -0.44
SEC16A-201ENST00000277537 DAPK1P53355 1430 aa12.31□□□□□ -0.44
SEC16A-201ENST00000277537 AFAP1Q8N556 730 aa12.31□□□□□ -0.44
SEC16A-201ENST00000277537 KIF15Q9NS87 1388 aa12.3□□□□□ -0.44
SEC16A-201ENST00000277537 NUP153P49790 1475 aaKnown RBP12.3□□□□□ -0.44
SEC16A-201ENST00000277537 ANKRD50Q9ULJ7 1429 aa12.3□□□□□ -0.44
SEC16A-201ENST00000277537 ARHGEF11O15085 1522 aa12.3□□□□□ -0.44
SEC16A-201ENST00000277537 TMC1Q8TDI8 760 aa12.3□□□□□ -0.44
SEC16A-201ENST00000277537 DISP1Q96F81 1524 aa12.28□□□□□ -0.44
SEC16A-201ENST00000277537 STAG3Q9UJ98 1225 aa12.28□□□□□ -0.44
SEC16A-201ENST00000277537 WDR97A6NE52 1622 aa12.28□□□□□ -0.44
SEC16A-201ENST00000277537 ABCC5O15440 1437 aa12.28□□□□□ -0.44
SEC16A-201ENST00000277537 UGGT2Q9NYU1 1516 aa12.28□□□□□ -0.44
SEC16A-201ENST00000277537 IRX6P78412 446 aaPredicted RBP12.27□□□□□ -0.45
SEC16A-201ENST00000277537 CFAP43Q8NDM7 1665 aa12.26□□□□□ -0.45
SEC16A-201ENST00000277537 KIAA0556O60303 1618 aa12.25□□□□□ -0.45
SEC16A-201ENST00000277537 SAMD9Q5K651 1589 aa12.25□□□□□ -0.45
SEC16A-201ENST00000277537 ESF1Q9H501 851 aaKnown RBP12.25□□□□□ -0.45
SEC16A-201ENST00000277537 NBPF8Q3BBV2 869 aa12.24□□□□□ -0.45
SEC16A-201ENST00000277537 ARHGAP5Q13017 1502 aa12.24□□□□□ -0.45
SEC16A-201ENST00000277537 MAPKBP1O60336 1514 aa12.24□□□□□ -0.45
SEC16A-201ENST00000277537 C9orf84Q5VXU9 1444 aa12.24□□□□□ -0.45
SEC16A-201ENST00000277537 MAGI3Q5TCQ9 1506 aa12.24□□□□□ -0.45
SEC16A-201ENST00000277537 ATP10BO94823 1461 aa12.23□□□□□ -0.45
SEC16A-201ENST00000277537 RAPGEF6Q8TEU7 1601 aa12.23□□□□□ -0.45
SEC16A-201ENST00000277537 CAMSAP2Q08AD1 1489 aa12.23□□□□□ -0.45
SEC16A-201ENST00000277537 ST20-MTHFSA0A0A6YYL1 179 aa12.22□□□□□ -0.45
SEC16A-201ENST00000277537 ROCK2O75116 1388 aaKnown RBP12.21□□□□□ -0.45
SEC16A-201ENST00000277537 MLECQ14165 292 aa12.21□□□□□ -0.45
SEC16A-201ENST00000277537 GPATCH8Q9UKJ3 1502 aaKnown RBP12.21□□□□□ -0.45
SEC16A-201ENST00000277537 NUP160Q12769 1436 aa12.21□□□□□ -0.46
SEC16A-201ENST00000277537 KANK1Q14678 1352 aa12.21□□□□□ -0.46
SEC16A-201ENST00000277537 CEP170Q5SW79 1584 aa12.2□□□□□ -0.46
SEC16A-201ENST00000277537 CCDC144AA2RUR9 1427 aa12.2□□□□□ -0.46
SEC16A-201ENST00000277537 NCOA1Q15788 1441 aa12.19□□□□□ -0.46
SEC16A-201ENST00000277537 CCER2I3L3R5 266 aa12.19□□□□□ -0.46
SEC16A-201ENST00000277537 CC2D1BQ5T0F9 858 aaKnown RBP12.19□□□□□ -0.46
SEC16A-201ENST00000277537 WASHC2AQ641Q2 1341 aa12.18□□□□□ -0.46
SEC16A-201ENST00000277537 ROCK1Q13464 1354 aa12.18□□□□□ -0.46
SEC16A-201ENST00000277537 NUTM2DQ5VT03 806 aaPredicted RBP12.18□□□□□ -0.46
SEC16A-201ENST00000277537 AKNAQ7Z591 1439 aa12.17□□□□□ -0.46
SEC16A-201ENST00000277537 SUPT16HQ9Y5B9 1047 aaKnown RBP12.17□□□□□ -0.46
SEC16A-201ENST00000277537 USP47Q96K76 1375 aa12.16□□□□□ -0.46
SEC16A-201ENST00000277537 ARID4BQ4LE39 1312 aaPredicted RBP12.15□□□□□ -0.46
SEC16A-201ENST00000277537 ANKRD30BQ9BXX2 1392 aa12.15□□□□□ -0.46
SEC16A-201ENST00000277537 KIAA1107Q9UPP5 1409 aa12.14□□□□□ -0.47
SEC16A-201ENST00000277537 WASHC2CQ9Y4E1 1318 aa12.14□□□□□ -0.47
SEC16A-201ENST00000277537 KIF14Q15058 1648 aa12.14□□□□□ -0.47
SEC16A-201ENST00000277537 TMF1P82094 1093 aa12.13□□□□□ -0.47
SEC16A-201ENST00000277537 SAFB2Q14151 953 aaKnown RBP eCLIP12.13□□□□□ -0.47
SEC16A-201ENST00000277537 KIF7Q2M1P5 1343 aa12.13□□□□□ -0.47
SEC16A-201ENST00000277537 ERICH6Q7L0X2 663 aa12.12□□□□□ -0.47
SEC16A-201ENST00000277537 KNSTRNQ9Y448 316 aa12.12□□□□□ -0.47
SEC16A-201ENST00000277537 SCAPERQ9BY12 1400 aa12.12□□□□□ -0.47
SEC16A-201ENST00000277537 NBPF1Q3BBV0 1214 aa12.12□□□□□ -0.47
SEC16A-201ENST00000277537 C11orf95C9JLR9 678 aaPredicted RBP12.12□□□□□ -0.47
SEC16A-201ENST00000277537 TCOF1Q13428 1488 aaKnown RBP12.11□□□□□ -0.47
SEC16A-201ENST00000277537 PRKRIP1Q9H875 184 aaPredicted RBP12.11□□□□□ -0.47
SEC16A-201ENST00000277537 RAPGEF3O95398 923 aa12.1□□□□□ -0.47
SEC16A-201ENST00000277537 CCDC7Q96M83 1385 aa12.1□□□□□ -0.47
SEC16A-201ENST00000277537 CCDC141Q6ZP82 1450 aa12.1□□□□□ -0.47
SEC16A-201ENST00000277537 FAM69CQ0P6D2 419 aa12.1□□□□□ -0.47
SEC16A-201ENST00000277537 TNNT2P45379 298 aaPredicted RBP12.09□□□□□ -0.47
SEC16A-201ENST00000277537 STK26Q9P289 416 aa12.09□□□□□ -0.47
SEC16A-201ENST00000277537 WDR43Q15061 677 aaKnown RBP eCLIP12.08□□□□□ -0.47
SEC16A-201ENST00000277537 SLC24A1O60721 1099 aa12.07□□□□□ -0.48
SEC16A-201ENST00000277537 CDCA8Q53HL2 280 aa12.06□□□□□ -0.48
SEC16A-201ENST00000277537 TRHP20396 242 aaPredicted RBP12.06□□□□□ -0.48
SEC16A-201ENST00000277537 PLEKHH2Q8IVE3 1493 aa12.05□□□□□ -0.48
SEC16A-201ENST00000277537 CCDC184Q52MB2 194 aa12.05□□□□□ -0.48
SEC16A-201ENST00000277537 TRAK1Q9UPV9 953 aa12.05□□□□□ -0.48
SEC16A-201ENST00000277537 RPRD2Q5VT52 1461 aaKnown RBP12.04□□□□□ -0.48
SEC16A-201ENST00000277537 PANK3Q9H999 370 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms