RNA–Protein interactions for RNA: ENST00000275493.6

EGFR-201, Transcript of epidermal growth factor receptor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EGFR, Length 9,821 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EGFR-201ENST00000275493 SIN3AQ96ST3 1273 aa14.08□□□□□ -0.16
EGFR-201ENST00000275493 ARHGAP35Q9NRY4 1499 aa14.07□□□□□ -0.16
EGFR-201ENST00000275493 MCCP23508 829 aa14.06□□□□□ -0.16
EGFR-201ENST00000275493 GNL2Q13823 731 aaKnown RBP14.05□□□□□ -0.16
EGFR-201ENST00000275493 AEBP2Q6ZN18 517 aaPredicted RBP14.05□□□□□ -0.16
EGFR-201ENST00000275493 G3V3G9 751 aa14.05□□□□□ -0.16
EGFR-201ENST00000275493 DCAF8Q5TAQ9 597 aa14.05□□□□□ -0.16
EGFR-201ENST00000275493 PLCB2Q00722 1185 aa14.05□□□□□ -0.16
EGFR-201ENST00000275493 DNTTIP2Q5QJE6 756 aaKnown RBP14.05□□□□□ -0.16
EGFR-201ENST00000275493 EFCAB2Q5VUJ9 269 aa14.05□□□□□ -0.16
EGFR-201ENST00000275493 GOLGA6L4A6NEF3 574 aa14.03□□□□□ -0.16
EGFR-201ENST00000275493 CECR2Q9BXF3 1484 aa14.03□□□□□ -0.16
EGFR-201ENST00000275493 EIF3AQ14152 1382 aaKnown RBP14.02□□□□□ -0.16
EGFR-201ENST00000275493 PKD2Q13563 968 aa14.02□□□□□ -0.17
EGFR-201ENST00000275493 SOGA1O94964 1423 aa14.01□□□□□ -0.17
EGFR-201ENST00000275493 SUPT16HQ9Y5B9 1047 aaKnown RBP14.01□□□□□ -0.17
EGFR-201ENST00000275493 ROCK2O75116 1388 aaKnown RBP14.01□□□□□ -0.17
EGFR-201ENST00000275493 CALD1Q05682 793 aaKnown RBP14□□□□□ -0.17
EGFR-201ENST00000275493 SMARCA2P51531 1590 aa14□□□□□ -0.17
EGFR-201ENST00000275493 CHMP3Q9Y3E7 222 aa14□□□□□ -0.17
EGFR-201ENST00000275493 SPAG9O60271 1321 aaKnown RBP13.99□□□□□ -0.17
EGFR-201ENST00000275493 APBB1O00213 710 aa13.99□□□□□ -0.17
EGFR-201ENST00000275493 NRDCO43847 1150 aa13.99□□□□□ -0.17
EGFR-201ENST00000275493 NGDNQ8NEJ9 315 aaKnown RBP13.99□□□□□ -0.17
EGFR-201ENST00000275493 TAF7LQ5H9L4 462 aa13.99□□□□□ -0.17
EGFR-201ENST00000275493 KTN1Q86UP2 1357 aaKnown RBP13.99□□□□□ -0.17
EGFR-201ENST00000275493 GORABQ5T7V8 394 aa13.98□□□□□ -0.17
EGFR-201ENST00000275493 NUTM2DQ5VT03 806 aaPredicted RBP13.98□□□□□ -0.17
EGFR-201ENST00000275493 KIF3BO15066 747 aa13.98□□□□□ -0.17
EGFR-201ENST00000275493 WASHC2CQ9Y4E1 1318 aa13.97□□□□□ -0.17
EGFR-201ENST00000275493 HSCBQ8IWL3 235 aa13.97□□□□□ -0.17
EGFR-201ENST00000275493 ANKRD30AQ9BXX3 1397 aa13.97□□□□□ -0.17
EGFR-201ENST00000275493 KIAA1211Q6ZU35 1233 aa13.96□□□□□ -0.17
EGFR-201ENST00000275493 MEX3CQ5U5Q3 659 aaKnown RBP13.96□□□□□ -0.17
EGFR-201ENST00000275493 IPO8O15397 1037 aaKnown RBP13.96□□□□□ -0.17
EGFR-201ENST00000275493 U2AF1L5P0DN76 240 aaPredicted RBP13.96□□□□□ -0.18
EGFR-201ENST00000275493 U2AF1Q01081 240 aaKnown RBP eCLIP13.96□□□□□ -0.18
EGFR-201ENST00000275493 TDRD9Q8NDG6 1382 aaKnown RBP13.96□□□□□ -0.18
EGFR-201ENST00000275493 NUP155O75694 1391 aa13.95□□□□□ -0.18
EGFR-201ENST00000275493 STK31Q9BXU1 1019 aa13.94□□□□□ -0.18
EGFR-201ENST00000275493 CFAP44Q96MT7 982 aa13.94□□□□□ -0.18
EGFR-201ENST00000275493 CHMP4AQ9BY43 222 aa13.94□□□□□ -0.18
EGFR-201ENST00000275493 FOXD1Q16676 465 aa13.94□□□□□ -0.18
EGFR-201ENST00000275493 TERF2IPQ9NYB0 399 aa13.93□□□□□ -0.18
EGFR-201ENST00000275493 GTF2E1P29083 439 aaPredicted RBP13.93□□□□□ -0.18
EGFR-201ENST00000275493 AMPHP49418 695 aa13.92□□□□□ -0.18
EGFR-201ENST00000275493 FMN1Q68DA7 1419 aa13.92□□□□□ -0.18
EGFR-201ENST00000275493 SETD5Q9C0A6 1442 aa13.92□□□□□ -0.18
EGFR-201ENST00000275493 GPATCH3Q96I76 525 aa13.92□□□□□ -0.18
EGFR-201ENST00000275493 MSH5O43196 834 aa13.92□□□□□ -0.18
EGFR-201ENST00000275493 ITPRIPQ8IWB1 547 aa13.91□□□□□ -0.18
EGFR-201ENST00000275493 LTV1Q96GA3 475 aaPredicted RBP13.91□□□□□ -0.18
EGFR-201ENST00000275493 PPP4R2Q9NY27 417 aa13.91□□□□□ -0.18
EGFR-201ENST00000275493 HNRNPMP52272 730 aaKnown RBP eCLIP13.9□□□□□ -0.18
EGFR-201ENST00000275493 MYO15BQ96JP2 1530 aa13.9□□□□□ -0.18
EGFR-201ENST00000275493 EVA1CP58658 441 aa13.89□□□□□ -0.19
EGFR-201ENST00000275493 HSPA5P11021 654 aaKnown RBP13.89□□□□□ -0.19
EGFR-201ENST00000275493 NUTM2FA1L443 756 aa13.89□□□□□ -0.19
EGFR-201ENST00000275493 KIAA2012Q0VF49 1180 aa13.89□□□□□ -0.19
EGFR-201ENST00000275493 FRAT2O75474 233 aaPredicted RBP13.88□□□□□ -0.19
EGFR-201ENST00000275493 DRC7Q8IY82 874 aa13.88□□□□□ -0.19
EGFR-201ENST00000275493 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.88□□□□□ -0.19
EGFR-201ENST00000275493 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.88□□□□□ -0.19
EGFR-201ENST00000275493 HDAC5Q9UQL6 1122 aa13.86□□□□□ -0.19
EGFR-201ENST00000275493 HSP90B1P14625 803 aaKnown RBP13.86□□□□□ -0.19
EGFR-201ENST00000275493 CCDC88BA6NC98 1476 aa13.86□□□□□ -0.19
EGFR-201ENST00000275493 SPRYD3Q8NCJ5 442 aa13.86□□□□□ -0.19
EGFR-201ENST00000275493 L1TD1Q5T7N2 865 aaKnown RBP13.85□□□□□ -0.19
EGFR-201ENST00000275493 CHAF1AQ13111 956 aaPredicted RBP13.85□□□□□ -0.19
EGFR-201ENST00000275493 PRM3Q9NNZ6 103 aa13.85□□□□□ -0.19
EGFR-201ENST00000275493 CCDC18Q5T9S5 1454 aa13.85□□□□□ -0.19
EGFR-201ENST00000275493 ABCC8Q09428 1581 aa13.85□□□□□ -0.19
EGFR-201ENST00000275493 CYB5RLQ6IPT4 315 aa13.84□□□□□ -0.19
EGFR-201ENST00000275493 VPS53Q5VIR6 699 aa13.84□□□□□ -0.19
EGFR-201ENST00000275493 MPHOSPH9Q99550 1183 aa13.84□□□□□ -0.19
EGFR-201ENST00000275493 B4GALNT3Q6L9W6 998 aa13.83□□□□□ -0.2
EGFR-201ENST00000275493 LMOD3Q0VAK6 560 aa13.83□□□□□ -0.2
EGFR-201ENST00000275493 SLC4A10Q6U841 1118 aa13.82□□□□□ -0.2
EGFR-201ENST00000275493 C1orf141Q5JVX7 400 aa13.81□□□□□ -0.2
EGFR-201ENST00000275493 RALBP1Q15311 655 aa13.81□□□□□ -0.2
EGFR-201ENST00000275493 TRIM6-TRIM34B2RNG4 842 aa13.81□□□□□ -0.2
EGFR-201ENST00000275493 TOMM22Q9NS69 142 aa13.81□□□□□ -0.2
EGFR-201ENST00000275493 HTATSF1O43719 755 aaKnown RBP13.81□□□□□ -0.2
EGFR-201ENST00000275493 HMMRO75330 724 aa13.81□□□□□ -0.2
EGFR-201ENST00000275493 RASSF8Q8NHQ8 419 aa13.81□□□□□ -0.2
EGFR-201ENST00000275493 RWDD1Q9H446 243 aaPredicted RBP13.81□□□□□ -0.2
EGFR-201ENST00000275493 TIMELESSQ9UNS1 1208 aa13.8□□□□□ -0.2
EGFR-201ENST00000275493 RSPH4AQ5TD94 716 aa13.8□□□□□ -0.2
EGFR-201ENST00000275493 SMC4Q9NTJ3 1288 aa13.79□□□□□ -0.2
EGFR-201ENST00000275493 VPS8Q8N3P4 1428 aa13.79□□□□□ -0.2
EGFR-201ENST00000275493 PHF23Q9BUL5 403 aaPredicted RBP13.79□□□□□ -0.2
EGFR-201ENST00000275493 OSCARQ8IYS5 282 aa13.79□□□□□ -0.2
EGFR-201ENST00000275493 NOC3LQ8WTT2 800 aaKnown RBP13.78□□□□□ -0.2
EGFR-201ENST00000275493 KLHL34Q8N239 644 aa13.78□□□□□ -0.2
EGFR-201ENST00000275493 NAP1L5Q96NT1 182 aaPredicted RBP13.78□□□□□ -0.2
EGFR-201ENST00000275493 UACAQ9BZF9 1416 aa13.77□□□□□ -0.2
EGFR-201ENST00000275493 TRAK1Q9UPV9 953 aa13.77□□□□□ -0.2
EGFR-201ENST00000275493 FHOD3Q2V2M9 1422 aa13.77□□□□□ -0.2
EGFR-201ENST00000275493 MARCH6O60337 910 aa13.77□□□□□ -0.21
EGFR-201ENST00000275493 TRIM34Q9BYJ4 488 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 8.7 ms