RNA–Protein interactions for RNA: ENST00000275223.7

VNN3-201, Transcript of vanin 3, humanhuman

TSL 1 (best) BASIC

Gene VNN3, Length 1,260 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VNN3-201ENST00000275223 HSPA2P54652 639 aa12.63□□□□□ -0.39
VNN3-201ENST00000275223 CDK11AQ9UQ88 783 aaPredicted RBP12.63□□□□□ -0.39
VNN3-201ENST00000275223 PLCH2O75038 1416 aa12.62□□□□□ -0.39
VNN3-201ENST00000275223 ZMYM4Q5VZL5 1548 aa12.62□□□□□ -0.39
VNN3-201ENST00000275223 BCORL1Q5H9F3 1711 aa12.62□□□□□ -0.39
VNN3-201ENST00000275223 EFCAB2Q5VUJ9 269 aa12.62□□□□□ -0.39
VNN3-201ENST00000275223 MAPK8IP2Q13387 824 aaPredicted RBP12.61□□□□□ -0.39
VNN3-201ENST00000275223 CERKQ8TCT0 537 aa12.61□□□□□ -0.39
VNN3-201ENST00000275223 DMRT2Q9Y5R5 561 aa12.61□□□□□ -0.39
VNN3-201ENST00000275223 MADDQ8WXG6 1647 aa12.61□□□□□ -0.39
VNN3-201ENST00000275223 EFCAB5A4FU69 1503 aa12.61□□□□□ -0.39
VNN3-201ENST00000275223 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.61□□□□□ -0.39
VNN3-201ENST00000275223 SCAPERQ9BY12 1400 aa12.61□□□□□ -0.39
VNN3-201ENST00000275223 YEATS2Q9ULM3 1422 aa12.61□□□□□ -0.39
VNN3-201ENST00000275223 ZFYVE16Q7Z3T8 1539 aa12.59□□□□□ -0.39
VNN3-201ENST00000275223 RTN4Q9NQC3 1192 aaKnown RBP12.59□□□□□ -0.39
VNN3-201ENST00000275223 CFAP74Q9C0B2 1584 aa12.59□□□□□ -0.39
VNN3-201ENST00000275223 NPM3O75607 178 aaKnown RBP12.58□□□□□ -0.4
VNN3-201ENST00000275223 ATP10AO60312 1499 aa12.58□□□□□ -0.4
VNN3-201ENST00000275223 FMN1Q68DA7 1419 aa12.57□□□□□ -0.4
VNN3-201ENST00000275223 MLECQ14165 292 aa12.57□□□□□ -0.4
VNN3-201ENST00000275223 C9orf84Q5VXU9 1444 aa12.55□□□□□ -0.4
VNN3-201ENST00000275223 ZNF518AQ6AHZ1 1483 aa12.53□□□□□ -0.4
VNN3-201ENST00000275223 ARHGEF12Q9NZN5 1544 aa12.53□□□□□ -0.4
VNN3-201ENST00000275223 RICTORQ6R327 1708 aa12.53□□□□□ -0.4
VNN3-201ENST00000275223 TTC37Q6PGP7 1564 aa12.52□□□□□ -0.4
VNN3-201ENST00000275223 HECW1Q76N89 1606 aa12.51□□□□□ -0.41
VNN3-201ENST00000275223 UBTFP17480 764 aaKnown RBP12.51□□□□□ -0.41
VNN3-201ENST00000275223 AFAP1Q8N556 730 aa12.51□□□□□ -0.41
VNN3-201ENST00000275223 ATP1B4Q9UN42 357 aaPredicted RBP12.51□□□□□ -0.41
VNN3-201ENST00000275223 CDK13Q14004 1512 aaKnown RBP12.51□□□□□ -0.41
VNN3-201ENST00000275223 CEBPAP49715 358 aaPredicted RBP12.5□□□□□ -0.41
VNN3-201ENST00000275223 CLIP1P30622 1438 aa12.5□□□□□ -0.41
VNN3-201ENST00000275223 TROQ12816 1431 aaPredicted RBP12.5□□□□□ -0.41
VNN3-201ENST00000275223 UHRF1BP1Q6BDS2 1440 aa12.5□□□□□ -0.41
VNN3-201ENST00000275223 RIMS1Q86UR5 1692 aaKnown RBP12.5□□□□□ -0.41
VNN3-201ENST00000275223 ESF1Q9H501 851 aaKnown RBP12.48□□□□□ -0.41
VNN3-201ENST00000275223 MLH3Q9UHC1 1453 aa12.46□□□□□ -0.41
VNN3-201ENST00000275223 MYT1LQ9UL68 1186 aa12.46□□□□□ -0.41
VNN3-201ENST00000275223 PTPRTO14522 1441 aa12.45□□□□□ -0.42
VNN3-201ENST00000275223 ARHGAP35Q9NRY4 1499 aa12.45□□□□□ -0.42
VNN3-201ENST00000275223 TRAPPC8Q9Y2L5 1435 aa12.45□□□□□ -0.42
VNN3-201ENST00000275223 KDM5CP41229 1560 aa12.44□□□□□ -0.42
VNN3-201ENST00000275223 CNTLNQ9NXG0 1405 aa12.44□□□□□ -0.42
VNN3-201ENST00000275223 REREQ9P2R6 1566 aa12.43□□□□□ -0.42
VNN3-201ENST00000275223 ARHGAP5Q13017 1502 aa12.43□□□□□ -0.42
VNN3-201ENST00000275223 AGLP35573 1532 aa12.42□□□□□ -0.42
VNN3-201ENST00000275223 DISP3Q9P2K9 1392 aa12.42□□□□□ -0.42
VNN3-201ENST00000275223 SOCS7O14512 581 aa12.41□□□□□ -0.42
VNN3-201ENST00000275223 SIGLEC1Q9BZZ2 1709 aa12.41□□□□□ -0.42
VNN3-201ENST00000275223 KIF14Q15058 1648 aa12.4□□□□□ -0.42
VNN3-201ENST00000275223 FOXD4L1Q9NU39 408 aa12.4□□□□□ -0.42
VNN3-201ENST00000275223 NPATQ14207 1427 aa12.39□□□□□ -0.43
VNN3-201ENST00000275223 ZBTB22O15209 634 aa12.39□□□□□ -0.43
VNN3-201ENST00000275223 CNKSR2Q8WXI2 1034 aa12.39□□□□□ -0.43
VNN3-201ENST00000275223 IQSEC2Q5JU85 1478 aa12.39□□□□□ -0.43
VNN3-201ENST00000275223 CASKIN1Q8WXD9 1431 aa12.38□□□□□ -0.43
VNN3-201ENST00000275223 CCDC18Q5T9S5 1454 aa12.38□□□□□ -0.43
VNN3-201ENST00000275223 FER1L4A9Z1Z3 1794 aa12.38□□□□□ -0.43
VNN3-201ENST00000275223 DIP2CQ9Y2E4 1556 aa12.37□□□□□ -0.43
VNN3-201ENST00000275223 PREX1Q8TCU6 1659 aa12.37□□□□□ -0.43
VNN3-201ENST00000275223 NCOA1Q15788 1441 aa12.37□□□□□ -0.43
VNN3-201ENST00000275223 ILDR2Q71H61 639 aa12.36□□□□□ -0.43
VNN3-201ENST00000275223 ZMYM3Q14202 1370 aa12.35□□□□□ -0.43
VNN3-201ENST00000275223 PKD2Q13563 968 aa12.35□□□□□ -0.43
VNN3-201ENST00000275223 SPAG9O60271 1321 aaKnown RBP12.35□□□□□ -0.43
VNN3-201ENST00000275223 KIAA1107Q9UPP5 1409 aa12.34□□□□□ -0.43
VNN3-201ENST00000275223 MYO5CQ9NQX4 1742 aa12.34□□□□□ -0.43
VNN3-201ENST00000275223 ABCC1P33527 1531 aa12.33□□□□□ -0.44
VNN3-201ENST00000275223 SETD1BQ9UPS6 1966 aaKnown RBP12.32□□□□□ -0.44
VNN3-201ENST00000275223 LTBP4Q8N2S1 1624 aa12.31□□□□□ -0.44
VNN3-201ENST00000275223 CFDP1Q9UEE9 299 aaPredicted RBP12.31□□□□□ -0.44
VNN3-201ENST00000275223 ZNF777Q9ULD5 760 aaPredicted RBP12.31□□□□□ -0.44
VNN3-201ENST00000275223 PLEKHH2Q8IVE3 1493 aa12.3□□□□□ -0.44
VNN3-201ENST00000275223 ABCA6Q8N139 1617 aa12.29□□□□□ -0.44
VNN3-201ENST00000275223 PLA2R1Q13018 1463 aa12.29□□□□□ -0.44
VNN3-201ENST00000275223 FYCO1Q9BQS8 1478 aa12.29□□□□□ -0.44
VNN3-201ENST00000275223 STRCQ7RTU9 1775 aa12.29□□□□□ -0.44
VNN3-201ENST00000275223 GPATCH8Q9UKJ3 1502 aaKnown RBP12.29□□□□□ -0.44
VNN3-201ENST00000275223 HNRNPMP52272 730 aaKnown RBP eCLIP12.29□□□□□ -0.44
VNN3-201ENST00000275223 PREX2Q70Z35 1606 aa12.27□□□□□ -0.44
VNN3-201ENST00000275223 UBAP1LF5GYI3 381 aa12.27□□□□□ -0.45
VNN3-201ENST00000275223 NCKAP5LQ9HCH0 1330 aa12.27□□□□□ -0.45
VNN3-201ENST00000275223 CCNB3Q8WWL7 1395 aa12.27□□□□□ -0.45
VNN3-201ENST00000275223 SAMD9LQ8IVG5 1584 aa12.26□□□□□ -0.45
VNN3-201ENST00000275223 GGT6Q6P531 493 aa12.26□□□□□ -0.45
VNN3-201ENST00000275223 ZNF335Q9H4Z2 1342 aaPredicted RBP12.26□□□□□ -0.45
VNN3-201ENST00000275223 PTPRKQ15262 1439 aa12.26□□□□□ -0.45
VNN3-201ENST00000275223 A2MP01023 1474 aa12.26□□□□□ -0.45
VNN3-201ENST00000275223 TCOF1Q13428 1488 aaKnown RBP12.25□□□□□ -0.45
VNN3-201ENST00000275223 C3P01024 1663 aa12.24□□□□□ -0.45
VNN3-201ENST00000275223 CAMSAP1Q5T5Y3 1602 aa12.24□□□□□ -0.45
VNN3-201ENST00000275223 RTEL1-TNFRSF6BF6WH68 1400 aa12.23□□□□□ -0.45
VNN3-201ENST00000275223 RSPH4AQ5TD94 716 aa12.23□□□□□ -0.45
VNN3-201ENST00000275223 KIDINS220Q9ULH0 1771 aa12.23□□□□□ -0.45
VNN3-201ENST00000275223 CDC42BPBQ9Y5S2 1711 aa12.23□□□□□ -0.45
VNN3-201ENST00000275223 SYCP2Q9BX26 1530 aa12.22□□□□□ -0.45
VNN3-201ENST00000275223 MTUS2Q5JR59 1369 aa12.22□□□□□ -0.45
VNN3-201ENST00000275223 PLXNC1O60486 1568 aa12.22□□□□□ -0.45
VNN3-201ENST00000275223 SPATA31D1Q6ZQQ2 1576 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms