RNA–Protein interactions for RNA: ENST00000274721.7

GFRA3-201, Transcript of GDNF family receptor alpha 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene GFRA3, Length 2,039 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA3-201ENST00000274721 UHRF1BP1LA0JNW5 1464 aa31.29■■■□□ 2.6
GFRA3-201ENST00000274721 RRP7BPQ9NSQ0 103 aa31.29■■■□□ 2.6
GFRA3-201ENST00000274721 CDC42BPAQ5VT25 1732 aa31.27■■■□□ 2.6
GFRA3-201ENST00000274721 ZNF316A6NFI3 1004 aaPredicted RBP31.19■■■□□ 2.58
GFRA3-201ENST00000274721 KDM5BQ9UGL1 1544 aa31.19■■■□□ 2.58
GFRA3-201ENST00000274721 OSCARQ8IYS5 282 aa31.17■■■□□ 2.58
GFRA3-201ENST00000274721 ZNF777Q9ULD5 760 aaPredicted RBP31.17■■■□□ 2.58
GFRA3-201ENST00000274721 KDM6BO15054 1643 aa31.14■■■□□ 2.58
GFRA3-201ENST00000274721 ZCCHC11Q5TAX3 1644 aaKnown RBP31.12■■■□□ 2.57
GFRA3-201ENST00000274721 ACIN1Q9UKV3 1341 aaKnown RBP31.12■■■□□ 2.57
GFRA3-201ENST00000274721 SIN3AQ96ST3 1273 aa31.11■■■□□ 2.57
GFRA3-201ENST00000274721 TIMELESSQ9UNS1 1208 aa31.1■■■□□ 2.57
GFRA3-201ENST00000274721 ADGRL2O95490 1459 aa31.1■■■□□ 2.57
GFRA3-201ENST00000274721 NCOA1Q15788 1441 aa31.1■■■□□ 2.57
GFRA3-201ENST00000274721 CROCC2H7BZ55 1655 aa31.1■■■□□ 2.57
GFRA3-201ENST00000274721 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP31.09■■■□□ 2.57
GFRA3-201ENST00000274721 PREX2Q70Z35 1606 aa31.09■■■□□ 2.57
GFRA3-201ENST00000274721 CDC42BPBQ9Y5S2 1711 aa31.08■■■□□ 2.57
GFRA3-201ENST00000274721 TTC37Q6PGP7 1564 aa31.05■■■□□ 2.56
GFRA3-201ENST00000274721 ADGBQ8N7X0 1667 aa31.04■■■□□ 2.56
GFRA3-201ENST00000274721 SHANK2Q9UPX8 1470 aa31.03■■■□□ 2.56
GFRA3-201ENST00000274721 MBD5Q9P267 1494 aa31.02■■■□□ 2.56
GFRA3-201ENST00000274721 DENND4BO75064 1496 aaPredicted RBP31.02■■■□□ 2.56
GFRA3-201ENST00000274721 NEUROD1Q13562 356 aa31.02■■■□□ 2.56
GFRA3-201ENST00000274721 ARHGEF5Q12774 1597 aa31.02■■■□□ 2.56
GFRA3-201ENST00000274721 SAMD9LQ8IVG5 1584 aa31■■■□□ 2.55
GFRA3-201ENST00000274721 DIEXFQ68CQ4 756 aaKnown RBP30.99■■■□□ 2.55
GFRA3-201ENST00000274721 TRIM52Q96A61 297 aa30.99■■■□□ 2.55
GFRA3-201ENST00000274721 ANKRD30AQ9BXX3 1397 aa30.99■■■□□ 2.55
GFRA3-201ENST00000274721 KCNH8Q96L42 1107 aa30.97■■■□□ 2.55
GFRA3-201ENST00000274721 RSPH4AQ5TD94 716 aa30.97■■■□□ 2.55
GFRA3-201ENST00000274721 MPHOSPH9Q99550 1183 aa30.96■■■□□ 2.55
GFRA3-201ENST00000274721 C9orf84Q5VXU9 1444 aa30.96■■■□□ 2.55
GFRA3-201ENST00000274721 HNRNPMP52272 730 aaKnown RBP eCLIP30.95■■■□□ 2.55
GFRA3-201ENST00000274721 MYO5CQ9NQX4 1742 aa30.94■■■□□ 2.54
GFRA3-201ENST00000274721 TSPY4P0CV99 314 aa30.93■■■□□ 2.54
GFRA3-201ENST00000274721 TSPY10P0CW01 314 aa30.93■■■□□ 2.54
GFRA3-201ENST00000274721 ARHGAP5Q13017 1502 aa30.93■■■□□ 2.54
GFRA3-201ENST00000274721 PLCH2O75038 1416 aa30.92■■■□□ 2.54
GFRA3-201ENST00000274721 CCDC141Q6ZP82 1450 aa30.9■■■□□ 2.54
GFRA3-201ENST00000274721 KIAA1107Q9UPP5 1409 aa30.89■■■□□ 2.54
GFRA3-201ENST00000274721 PPP1R15AO75807 674 aaPredicted RBP30.86■■■□□ 2.53
GFRA3-201ENST00000274721 ANKRD50Q9ULJ7 1429 aa30.86■■■□□ 2.53
GFRA3-201ENST00000274721 PLEKHH2Q8IVE3 1493 aa30.86■■■□□ 2.53
GFRA3-201ENST00000274721 WDR7Q9Y4E6 1490 aa30.86■■■□□ 2.53
GFRA3-201ENST00000274721 SYCP2Q9BX26 1530 aa30.84■■■□□ 2.53
GFRA3-201ENST00000274721 TONSLQ96HA7 1378 aa30.81■■■□□ 2.52
GFRA3-201ENST00000274721 EFCAB2Q5VUJ9 269 aa30.8■■■□□ 2.52
GFRA3-201ENST00000274721 ARAP3Q8WWN8 1544 aa30.8■■■□□ 2.52
GFRA3-201ENST00000274721 PZPP20742 1482 aa30.79■■■□□ 2.52
GFRA3-201ENST00000274721 MAST1Q9Y2H9 1570 aa30.79■■■□□ 2.52
GFRA3-201ENST00000274721 KIF15Q9NS87 1388 aa30.77■■■□□ 2.52
GFRA3-201ENST00000274721 SLC4A1APQ9BWU0 796 aaKnown RBP30.77■■■□□ 2.52
GFRA3-201ENST00000274721 ANKRD30BQ9BXX2 1392 aa30.77■■■□□ 2.52
GFRA3-201ENST00000274721 ARHGEF12Q9NZN5 1544 aa30.76■■■□□ 2.51
GFRA3-201ENST00000274721 ASXL2Q76L83 1435 aa30.74■■■□□ 2.51
GFRA3-201ENST00000274721 FOXD1Q16676 465 aa30.73■■■□□ 2.51
GFRA3-201ENST00000274721 ABCA9Q8IUA7 1624 aa30.71■■■□□ 2.51
GFRA3-201ENST00000274721 ABCC1P33527 1531 aa30.7■■■□□ 2.51
GFRA3-201ENST00000274721 KDM5DQ9BY66 1539 aa30.67■■■□□ 2.5
GFRA3-201ENST00000274721 NPM1P06748 294 aaKnown RBP eCLIP30.66■■■□□ 2.5
GFRA3-201ENST00000274721 PLXNC1O60486 1568 aa30.65■■■□□ 2.5
GFRA3-201ENST00000274721 RPRD2Q5VT52 1461 aaKnown RBP30.64■■■□□ 2.49
GFRA3-201ENST00000274721 NUP155O75694 1391 aa30.63■■■□□ 2.49
GFRA3-201ENST00000274721 TRAPPC8Q9Y2L5 1435 aa30.61■■■□□ 2.49
GFRA3-201ENST00000274721 PKD2Q13563 968 aa30.59■■■□□ 2.49
GFRA3-201ENST00000274721 FANCAO15360 1455 aa30.58■■■□□ 2.49
GFRA3-201ENST00000274721 DUOX2Q9NRD8 1548 aa30.54■■■□□ 2.48
GFRA3-201ENST00000274721 L3MBTL2Q969R5 705 aa30.54■■■□□ 2.48
GFRA3-201ENST00000274721 RTEL1-TNFRSF6BF6WH68 1400 aa30.53■■■□□ 2.48
GFRA3-201ENST00000274721 TEX14Q8IWB6 1497 aa30.49■■■□□ 2.47
GFRA3-201ENST00000274721 AFAP1Q8N556 730 aa30.49■■■□□ 2.47
GFRA3-201ENST00000274721 ERBINQ96RT1 1412 aa30.49■■■□□ 2.47
GFRA3-201ENST00000274721 UNC13BO14795 1591 aa30.49■■■□□ 2.47
GFRA3-201ENST00000274721 SPAG9O60271 1321 aaKnown RBP30.48■■■□□ 2.47
GFRA3-201ENST00000274721 FAM135AQ9P2D6 1515 aa30.47■■■□□ 2.47
GFRA3-201ENST00000274721 MIER1Q8N108 512 aa30.46■■■□□ 2.47
GFRA3-201ENST00000274721 ADGRL1O94910 1474 aa30.45■■■□□ 2.47
GFRA3-201ENST00000274721 ZFYVE16Q7Z3T8 1539 aa30.44■■■□□ 2.46
GFRA3-201ENST00000274721 SCAPERQ9BY12 1400 aa30.43■■■□□ 2.46
GFRA3-201ENST00000274721 MAGI2Q86UL8 1455 aa30.41■■■□□ 2.46
GFRA3-201ENST00000274721 CD109Q6YHK3 1445 aa30.4■■■□□ 2.46
GFRA3-201ENST00000274721 INO80Q9ULG1 1556 aaPredicted RBP30.38■■■□□ 2.45
GFRA3-201ENST00000274721 IQGAP3Q86VI3 1631 aa30.37■■■□□ 2.45
GFRA3-201ENST00000274721 RIMBP3CA6NJZ7 1639 aa30.37■■■□□ 2.45
GFRA3-201ENST00000274721 RIMBP3BA6NNM3 1639 aa30.37■■■□□ 2.45
GFRA3-201ENST00000274721 RIMBP3Q9UFD9 1639 aa30.37■■■□□ 2.45
GFRA3-201ENST00000274721 CYB5RLQ6IPT4 315 aa30.37■■■□□ 2.45
GFRA3-201ENST00000274721 ATP7AQ04656 1500 aa30.35■■■□□ 2.45
GFRA3-201ENST00000274721 NBPF8Q3BBV2 869 aa30.32■■■□□ 2.44
GFRA3-201ENST00000274721 GRWD1Q9BQ67 446 aaKnown RBP eCLIP30.31■■■□□ 2.44
GFRA3-201ENST00000274721 HIRIP3Q9BW71 556 aaPredicted RBP30.31■■■□□ 2.44
GFRA3-201ENST00000274721 CFAP74Q9C0B2 1584 aa30.31■■■□□ 2.44
GFRA3-201ENST00000274721 ZNF518AQ6AHZ1 1483 aa30.28■■■□□ 2.44
GFRA3-201ENST00000274721 PLA2R1Q13018 1463 aa30.25■■■□□ 2.43
GFRA3-201ENST00000274721 DHX29Q7Z478 1369 aaKnown RBP30.23■■■□□ 2.43
GFRA3-201ENST00000274721 ATP10AO60312 1499 aa30.22■■■□□ 2.43
GFRA3-201ENST00000274721 NEO1Q92859 1461 aa30.22■■■□□ 2.43
GFRA3-201ENST00000274721 KIDINS220Q9ULH0 1771 aa30.22■■■□□ 2.43
GFRA3-201ENST00000274721 DEPDC5O75140 1603 aa30.22■■■□□ 2.43
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms