RNA–Protein interactions for RNA: ENST00000274065.8

RPS3A-201, Transcript of ribosomal protein S3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPS3A, Length 934 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3A-201ENST00000274065 CFAP43Q8NDM7 1665 aa14.7□□□□□ -0.06
RPS3A-201ENST00000274065 LMTK3Q96Q04 1460 aa14.68□□□□□ -0.06
RPS3A-201ENST00000274065 RAPGEF2Q9Y4G8 1499 aa14.68□□□□□ -0.06
RPS3A-201ENST00000274065 ARAP3Q8WWN8 1544 aa14.67□□□□□ -0.06
RPS3A-201ENST00000274065 ADAMTSL3P82987 1691 aa14.67□□□□□ -0.06
RPS3A-201ENST00000274065 ABCA8O94911 1581 aa14.64□□□□□ -0.07
RPS3A-201ENST00000274065 PCF11O94913 1555 aaKnown RBP14.64□□□□□ -0.07
RPS3A-201ENST00000274065 RAPGEF3O95398 923 aa14.63□□□□□ -0.07
RPS3A-201ENST00000274065 EHMT2Q96KQ7 1210 aa14.63□□□□□ -0.07
RPS3A-201ENST00000274065 ARID3CA6NKF2 412 aa14.61□□□□□ -0.07
RPS3A-201ENST00000274065 PITPNM1O00562 1244 aa14.61□□□□□ -0.07
RPS3A-201ENST00000274065 HSPA2P54652 639 aa14.6□□□□□ -0.07
RPS3A-201ENST00000274065 ILDR2Q71H61 639 aa14.59□□□□□ -0.07
RPS3A-201ENST00000274065 ARID4BQ4LE39 1312 aaPredicted RBP14.59□□□□□ -0.07
RPS3A-201ENST00000274065 MADDQ8WXG6 1647 aa14.59□□□□□ -0.07
RPS3A-201ENST00000274065 BCORL1Q5H9F3 1711 aa14.58□□□□□ -0.08
RPS3A-201ENST00000274065 GOLGA3Q08378 1498 aa14.57□□□□□ -0.08
RPS3A-201ENST00000274065 PHLDB1Q86UU1 1377 aa14.57□□□□□ -0.08
RPS3A-201ENST00000274065 CERKQ8TCT0 537 aa14.56□□□□□ -0.08
RPS3A-201ENST00000274065 ATP10BO94823 1461 aa14.56□□□□□ -0.08
RPS3A-201ENST00000274065 SSUH2Q9Y2M2 353 aa14.54□□□□□ -0.08
RPS3A-201ENST00000274065 FRMPD1Q5SYB0 1578 aa14.54□□□□□ -0.08
RPS3A-201ENST00000274065 PIP4P2Q8N4L2 257 aa14.53□□□□□ -0.08
RPS3A-201ENST00000274065 ABCA9Q8IUA7 1624 aa14.52□□□□□ -0.08
RPS3A-201ENST00000274065 DISP3Q9P2K9 1392 aa14.52□□□□□ -0.08
RPS3A-201ENST00000274065 SOCS7O14512 581 aa14.52□□□□□ -0.09
RPS3A-201ENST00000274065 NEO1Q92859 1461 aa14.51□□□□□ -0.09
RPS3A-201ENST00000274065 CTTNBP2Q8WZ74 1663 aa14.51□□□□□ -0.09
RPS3A-201ENST00000274065 RIMS1Q86UR5 1692 aaKnown RBP14.5□□□□□ -0.09
RPS3A-201ENST00000274065 P3H3Q8IVL6 736 aa14.5□□□□□ -0.09
RPS3A-201ENST00000274065 FXR2P51116 673 aaKnown RBP eCLIP14.49□□□□□ -0.09
RPS3A-201ENST00000274065 ZNF692Q9BU19 519 aaPredicted RBP14.49□□□□□ -0.09
RPS3A-201ENST00000274065 ARHGEF40Q8TER5 1519 aa14.47□□□□□ -0.09
RPS3A-201ENST00000274065 DENND4BO75064 1496 aaPredicted RBP14.43□□□□□ -0.1
RPS3A-201ENST00000274065 PRXQ9BXM0 1461 aa14.43□□□□□ -0.1
RPS3A-201ENST00000274065 FHOD3Q2V2M9 1422 aa14.41□□□□□ -0.1
RPS3A-201ENST00000274065 MLECQ14165 292 aa14.41□□□□□ -0.1
RPS3A-201ENST00000274065 FAM9AQ8IZU1 332 aaPredicted RBP14.41□□□□□ -0.1
RPS3A-201ENST00000274065 SPDYE1Q8NFV5 336 aaPredicted RBP14.41□□□□□ -0.1
RPS3A-201ENST00000274065 SIGLEC1Q9BZZ2 1709 aa14.41□□□□□ -0.1
RPS3A-201ENST00000274065 POGZQ7Z3K3 1410 aa14.41□□□□□ -0.1
RPS3A-201ENST00000274065 AKNAQ7Z591 1439 aa14.41□□□□□ -0.1
RPS3A-201ENST00000274065 YEATS2Q9ULM3 1422 aa14.41□□□□□ -0.1
RPS3A-201ENST00000274065 FANCAO15360 1455 aa14.39□□□□□ -0.11
RPS3A-201ENST00000274065 RICTORQ6R327 1708 aa14.39□□□□□ -0.11
RPS3A-201ENST00000274065 NUP153P49790 1475 aaKnown RBP14.37□□□□□ -0.11
RPS3A-201ENST00000274065 RAPGEF6Q8TEU7 1601 aa14.37□□□□□ -0.11
RPS3A-201ENST00000274065 ZMYM4Q5VZL5 1548 aa14.36□□□□□ -0.11
RPS3A-201ENST00000274065 ZFYVE16Q7Z3T8 1539 aa14.36□□□□□ -0.11
RPS3A-201ENST00000274065 TTC37Q6PGP7 1564 aa14.34□□□□□ -0.11
RPS3A-201ENST00000274065 SPATA31D1Q6ZQQ2 1576 aa14.34□□□□□ -0.11
RPS3A-201ENST00000274065 CEBPAP49715 358 aaPredicted RBP14.34□□□□□ -0.11
RPS3A-201ENST00000274065 EFCAB5A4FU69 1503 aa14.33□□□□□ -0.12
RPS3A-201ENST00000274065 SAMD9Q5K651 1589 aa14.33□□□□□ -0.12
RPS3A-201ENST00000274065 PLEKHD1A6NEE1 506 aa14.32□□□□□ -0.12
RPS3A-201ENST00000274065 FER1L4A9Z1Z3 1794 aa14.32□□□□□ -0.12
RPS3A-201ENST00000274065 MAGI2Q86UL8 1455 aa14.31□□□□□ -0.12
RPS3A-201ENST00000274065 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP14.31□□□□□ -0.122e-8■□□□□ 10.7
RPS3A-201ENST00000274065 ARHGEF12Q9NZN5 1544 aa14.31□□□□□ -0.12
RPS3A-201ENST00000274065 HECW1Q76N89 1606 aa14.3□□□□□ -0.12
RPS3A-201ENST00000274065 CLEC11AQ9Y240 323 aa14.3□□□□□ -0.12
RPS3A-201ENST00000274065 STRCQ7RTU9 1775 aa14.29□□□□□ -0.12
RPS3A-201ENST00000274065 CFAP74Q9C0B2 1584 aa14.29□□□□□ -0.12
RPS3A-201ENST00000274065 PREX1Q8TCU6 1659 aa14.29□□□□□ -0.12
RPS3A-201ENST00000274065 SCAPERQ9BY12 1400 aa14.27□□□□□ -0.12
RPS3A-201ENST00000274065 RANGAP1P46060 587 aaPredicted RBP14.27□□□□□ -0.13
RPS3A-201ENST00000274065 ATP10AO60312 1499 aa14.26□□□□□ -0.13
RPS3A-201ENST00000274065 UHRF1BP1Q6BDS2 1440 aa14.25□□□□□ -0.13
RPS3A-201ENST00000274065 C9orf84Q5VXU9 1444 aa14.24□□□□□ -0.13
RPS3A-201ENST00000274065 SP7Q8TDD2 431 aaPredicted RBP14.24□□□□□ -0.13
RPS3A-201ENST00000274065 PTPRTO14522 1441 aa14.24□□□□□ -0.13
RPS3A-201ENST00000274065 LTBP4Q8N2S1 1624 aa14.23□□□□□ -0.13
RPS3A-201ENST00000274065 PLCH2O75038 1416 aa14.22□□□□□ -0.13
RPS3A-201ENST00000274065 PRKAR2AP13861 404 aaKnown RBP14.2□□□□□ -0.14
RPS3A-201ENST00000274065 HAX1O00165 279 aa14.19□□□□□ -0.14
RPS3A-201ENST00000274065 CDK13Q14004 1512 aaKnown RBP14.19□□□□□ -0.14
RPS3A-201ENST00000274065 EFCAB2Q5VUJ9 269 aa14.17□□□□□ -0.14
RPS3A-201ENST00000274065 AFAP1Q8N556 730 aa14.16□□□□□ -0.14
RPS3A-201ENST00000274065 IQSEC2Q5JU85 1478 aa14.16□□□□□ -0.14
RPS3A-201ENST00000274065 SETD1BQ9UPS6 1966 aaKnown RBP14.15□□□□□ -0.14
RPS3A-201ENST00000274065 NCOA1Q15788 1441 aa14.14□□□□□ -0.15
RPS3A-201ENST00000274065 ZNF518AQ6AHZ1 1483 aa14.13□□□□□ -0.15
RPS3A-201ENST00000274065 C3P01024 1663 aa14.12□□□□□ -0.15
RPS3A-201ENST00000274065 PRR29P0C7W0 189 aa14.12□□□□□ -0.15
RPS3A-201ENST00000274065 TRAPPC8Q9Y2L5 1435 aa14.12□□□□□ -0.15
RPS3A-201ENST00000274065 UBAP1LF5GYI3 381 aa14.11□□□□□ -0.15
RPS3A-201ENST00000274065 KDM5CP41229 1560 aa14.11□□□□□ -0.15
RPS3A-201ENST00000274065 MYT1LQ9UL68 1186 aa14.11□□□□□ -0.15
RPS3A-201ENST00000274065 DIP2CQ9Y2E4 1556 aa14.11□□□□□ -0.15
RPS3A-201ENST00000274065 ZNF335Q9H4Z2 1342 aaPredicted RBP14.1□□□□□ -0.15
RPS3A-201ENST00000274065 ESF1Q9H501 851 aaKnown RBP14.08□□□□□ -0.16
RPS3A-201ENST00000274065 NCKAP5LQ9HCH0 1330 aa14.08□□□□□ -0.16
RPS3A-201ENST00000274065 REREQ9P2R6 1566 aa14.08□□□□□ -0.16
RPS3A-201ENST00000274065 MYO5CQ9NQX4 1742 aa14.07□□□□□ -0.16
RPS3A-201ENST00000274065 ATP1B4Q9UN42 357 aaPredicted RBP14.07□□□□□ -0.16
RPS3A-201ENST00000274065 KIF14Q15058 1648 aa14.07□□□□□ -0.16
RPS3A-201ENST00000274065 CAMSAP1Q5T5Y3 1602 aa14.07□□□□□ -0.16
RPS3A-201ENST00000274065 ABCA6Q8N139 1617 aa14.07□□□□□ -0.16
RPS3A-201ENST00000274065 ARHGAP5Q13017 1502 aa14.06□□□□□ -0.16
RPS3A-201ENST00000274065 MLH3Q9UHC1 1453 aa14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms