RNA–Protein interactions for RNA: ENST00000273048.2

RETREG2-201, Transcript of reticulophagy regulator family member 2, humanhuman

TSL 1 (best)

Gene RETREG2, Length 2,533 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG2-201ENST00000273048 MRS2Q9HD23 443 aa32.72■■■□□ 2.83
RETREG2-201ENST00000273048 NCOA1Q15788 1441 aa32.72■■■□□ 2.83
RETREG2-201ENST00000273048 ERICH6BQ5W0A0 696 aa32.7■■■□□ 2.83
RETREG2-201ENST00000273048 AKNAQ7Z591 1439 aa32.69■■■□□ 2.82
RETREG2-201ENST00000273048 MRC2Q9UBG0 1479 aa32.68■■■□□ 2.82
RETREG2-201ENST00000273048 NBPF8Q3BBV2 869 aa32.68■■■□□ 2.82
RETREG2-201ENST00000273048 ADAMTS12P58397 1594 aa32.67■■■□□ 2.82
RETREG2-201ENST00000273048 B4GALNT3Q6L9W6 998 aa32.66■■■□□ 2.82
RETREG2-201ENST00000273048 ERICH6Q7L0X2 663 aa32.65■■■□□ 2.82
RETREG2-201ENST00000273048 IQGAP2Q13576 1575 aa32.65■■■□□ 2.82
RETREG2-201ENST00000273048 EPRSP07814 1512 aaKnown RBP32.64■■■□□ 2.82
RETREG2-201ENST00000273048 CDK13Q14004 1512 aaKnown RBP32.64■■■□□ 2.82
RETREG2-201ENST00000273048 ZBED9Q6R2W3 1325 aa32.62■■■□□ 2.81
RETREG2-201ENST00000273048 ZNF608Q9ULD9 1512 aaPredicted RBP32.6■■■□□ 2.81
RETREG2-201ENST00000273048 MIA2Q96PC5 1412 aa32.59■■■□□ 2.81
RETREG2-201ENST00000273048 KIF7Q2M1P5 1343 aa32.58■■■□□ 2.81
RETREG2-201ENST00000273048 ANKRD30BQ9BXX2 1392 aa32.57■■■□□ 2.81
RETREG2-201ENST00000273048 RPRD2Q5VT52 1461 aaKnown RBP32.55■■■□□ 2.8
RETREG2-201ENST00000273048 TEX14Q8IWB6 1497 aa32.54■■■□□ 2.8
RETREG2-201ENST00000273048 SPATA31E1Q6ZUB1 1445 aa32.5■■■□□ 2.79
RETREG2-201ENST00000273048 CNGB1Q14028 1251 aaPredicted RBP32.49■■■□□ 2.79
RETREG2-201ENST00000273048 DAPK1P53355 1430 aa32.48■■■□□ 2.79
RETREG2-201ENST00000273048 SLC4A1APQ9BWU0 796 aaKnown RBP32.47■■■□□ 2.79
RETREG2-201ENST00000273048 ZNF644Q9H582 1327 aaPredicted RBP32.47■■■□□ 2.79
RETREG2-201ENST00000273048 WDR62O43379 1518 aa32.46■■■□□ 2.79
RETREG2-201ENST00000273048 IFT140Q96RY7 1462 aa32.44■■■□□ 2.78
RETREG2-201ENST00000273048 ABCC5O15440 1437 aa32.43■■■□□ 2.78
RETREG2-201ENST00000273048 ROCK1Q13464 1354 aa32.42■■■□□ 2.78
RETREG2-201ENST00000273048 POLR1AO95602 1720 aaPredicted RBP32.39■■■□□ 2.78
RETREG2-201ENST00000273048 POLR3GLQ9BT43 218 aa32.37■■■□□ 2.77
RETREG2-201ENST00000273048 DNMT1P26358 1616 aaKnown RBP32.36■■■□□ 2.77
RETREG2-201ENST00000273048 SENP3-EIF4A1A0A087X0R7 540 aa32.34■■■□□ 2.77
RETREG2-201ENST00000273048 DHX29Q7Z478 1369 aaKnown RBP32.33■■■□□ 2.77
RETREG2-201ENST00000273048 EIF4G3O43432 1585 aaKnown RBP32.32■■■□□ 2.76
RETREG2-201ENST00000273048 DISP1Q96F81 1524 aa32.32■■■□□ 2.76
RETREG2-201ENST00000273048 KIAA0556O60303 1618 aa32.31■■■□□ 2.76
RETREG2-201ENST00000273048 SMG6Q86US8 1419 aaKnown RBP32.31■■■□□ 2.76
RETREG2-201ENST00000273048 ZNF326Q5BKZ1 582 aaKnown RBP32.31■■■□□ 2.76
RETREG2-201ENST00000273048 KIAA0586Q9BVV6 1533 aa32.29■■■□□ 2.76
RETREG2-201ENST00000273048 PZPP20742 1482 aa32.26■■■□□ 2.76
RETREG2-201ENST00000273048 GRIN2AQ12879 1464 aa32.26■■■□□ 2.76
RETREG2-201ENST00000273048 NUDCQ9Y266 331 aa32.26■■■□□ 2.75
RETREG2-201ENST00000273048 BCORL1Q5H9F3 1711 aa32.25■■■□□ 2.75
RETREG2-201ENST00000273048 USP47Q96K76 1375 aa32.24■■■□□ 2.75
RETREG2-201ENST00000273048 ERCC6Q03468 1493 aa32.23■■■□□ 2.75
RETREG2-201ENST00000273048 NUP153P49790 1475 aaKnown RBP32.22■■■□□ 2.75
RETREG2-201ENST00000273048 NOP58Q9Y2X3 529 aaKnown RBP32.2■■■□□ 2.75
RETREG2-201ENST00000273048 MBD5Q9P267 1494 aa32.2■■■□□ 2.74
RETREG2-201ENST00000273048 PAK3O75914 559 aaPredicted RBP32.19■■■□□ 2.74
RETREG2-201ENST00000273048 CCDC136Q96JN2 1154 aa32.19■■■□□ 2.74
RETREG2-201ENST00000273048 RNF123Q5XPI4 1314 aa32.17■■■□□ 2.74
RETREG2-201ENST00000273048 RAPGEF6Q8TEU7 1601 aa32.16■■■□□ 2.74
RETREG2-201ENST00000273048 DEKP35659 375 aaKnown RBP32.14■■■□□ 2.73
RETREG2-201ENST00000273048 FBLN2P98095 1184 aa32.14■■■□□ 2.73
RETREG2-201ENST00000273048 PKD2Q13563 968 aa32.13■■■□□ 2.73
RETREG2-201ENST00000273048 KIAA1107Q9UPP5 1409 aa32.12■■■□□ 2.73
RETREG2-201ENST00000273048 NBR1Q14596 966 aa32.11■■■□□ 2.73
RETREG2-201ENST00000273048 CHMP7Q8WUX9 453 aaPredicted RBP32.11■■■□□ 2.73
RETREG2-201ENST00000273048 CAMSAP2Q08AD1 1489 aa32.11■■■□□ 2.73
RETREG2-201ENST00000273048 PNISRQ8TF01 805 aaKnown RBP32.11■■■□□ 2.73
RETREG2-201ENST00000273048 CFDP1Q9UEE9 299 aaPredicted RBP32.11■■■□□ 2.73
RETREG2-201ENST00000273048 ZNF777Q9ULD5 760 aaPredicted RBP32.11■■■□□ 2.73
RETREG2-201ENST00000273048 PRG4Q92954 1404 aaPredicted RBP32.1■■■□□ 2.73
RETREG2-201ENST00000273048 MYT1LQ9UL68 1186 aa32.1■■■□□ 2.73
RETREG2-201ENST00000273048 CEP170Q5SW79 1584 aa32.1■■■□□ 2.73
RETREG2-201ENST00000273048 KDM5CP41229 1560 aa32.09■■■□□ 2.73
RETREG2-201ENST00000273048 TMC1Q8TDI8 760 aa32.07■■■□□ 2.73
RETREG2-201ENST00000273048 KIF14Q15058 1648 aa32.07■■■□□ 2.72
RETREG2-201ENST00000273048 PLB1Q6P1J6 1458 aa32.05■■■□□ 2.72
RETREG2-201ENST00000273048 MAGI1Q96QZ7 1491 aaPredicted RBP32.05■■■□□ 2.72
RETREG2-201ENST00000273048 SYNJ2O15056 1496 aa32.02■■■□□ 2.72
RETREG2-201ENST00000273048 ARID4BQ4LE39 1312 aaPredicted RBP32.01■■■□□ 2.71
RETREG2-201ENST00000273048 ADGBQ8N7X0 1667 aa32.01■■■□□ 2.71
RETREG2-201ENST00000273048 TROQ12816 1431 aaPredicted RBP32■■■□□ 2.71
RETREG2-201ENST00000273048 CARD11Q9BXL7 1154 aa31.99■■■□□ 2.71
RETREG2-201ENST00000273048 GPATCH8Q9UKJ3 1502 aaKnown RBP31.99■■■□□ 2.71
RETREG2-201ENST00000273048 ANP32AP39687 249 aaKnown RBP31.98■■■□□ 2.71
RETREG2-201ENST00000273048 IPO9Q96P70 1041 aaKnown RBP31.96■■■□□ 2.71
RETREG2-201ENST00000273048 ROCK2O75116 1388 aaKnown RBP31.95■■■□□ 2.7
RETREG2-201ENST00000273048 ADGRL2O95490 1459 aa31.95■■■□□ 2.7
RETREG2-201ENST00000273048 RALGAPBQ86X10 1494 aa31.93■■■□□ 2.7
RETREG2-201ENST00000273048 ANKRD30AQ9BXX3 1397 aa31.93■■■□□ 2.7
RETREG2-201ENST00000273048 KDM2AQ9Y2K7 1162 aa31.93■■■□□ 2.7
RETREG2-201ENST00000273048 KIF15Q9NS87 1388 aa31.93■■■□□ 2.7
RETREG2-201ENST00000273048 ANKRD50Q9ULJ7 1429 aa31.92■■■□□ 2.7
RETREG2-201ENST00000273048 ITSN2Q9NZM3 1697 aa31.92■■■□□ 2.7
RETREG2-201ENST00000273048 ST20-MTHFSA0A0A6YYL1 179 aa31.92■■■□□ 2.7
RETREG2-201ENST00000273048 UHRF1BP1Q6BDS2 1440 aa31.92■■■□□ 2.7
RETREG2-201ENST00000273048 CROCC2H7BZ55 1655 aa31.91■■■□□ 2.7
RETREG2-201ENST00000273048 JPH4Q96JJ6 628 aa31.9■■■□□ 2.7
RETREG2-201ENST00000273048 LRPPRCP42704 1394 aaKnown RBP31.9■■■□□ 2.7
RETREG2-201ENST00000273048 NUP155O75694 1391 aa31.89■■■□□ 2.69
RETREG2-201ENST00000273048 ZBTB47Q9UFB7 747 aaPredicted RBP31.86■■■□□ 2.69
RETREG2-201ENST00000273048 SALL2Q9Y467 1007 aaPredicted RBP31.86■■■□□ 2.69
RETREG2-201ENST00000273048 MYBBP1AQ9BQG0 1328 aaKnown RBP31.86■■■□□ 2.69
RETREG2-201ENST00000273048 NUP160Q12769 1436 aa31.85■■■□□ 2.69
RETREG2-201ENST00000273048 RRP1P56182 461 aaKnown RBP31.84■■■□□ 2.69
RETREG2-201ENST00000273048 EXOC6Q8TAG9 804 aa31.84■■■□□ 2.69
RETREG2-201ENST00000273048 BRD4O60885 1362 aaPredicted RBP31.84■■■□□ 2.69
RETREG2-201ENST00000273048 CARMIL2Q6F5E8 1435 aa31.84■■■□□ 2.69
Retrieved 100 of 20,778 RNA–protein pairs in 85.9 ms