RNA–Protein interactions for RNA: ENST00000271971.6

CAPN9-201, Transcript of calpain 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN9, Length 2,362 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN9-201ENST00000271971 ZNF777Q9ULD5 760 aaPredicted RBP18.67■□□□□ 0.58
CAPN9-201ENST00000271971 DNMT1P26358 1616 aaKnown RBP18.66■□□□□ 0.58
CAPN9-201ENST00000271971 ZEB1P37275 1124 aaPredicted RBP18.66■□□□□ 0.58
CAPN9-201ENST00000271971 SETD5Q9C0A6 1442 aa18.65■□□□□ 0.58
CAPN9-201ENST00000271971 MYO5CQ9NQX4 1742 aa18.65■□□□□ 0.58
CAPN9-201ENST00000271971 CHIC2Q9UKJ5 165 aa18.63■□□□□ 0.57
CAPN9-201ENST00000271971 DAPK1P53355 1430 aa18.63■□□□□ 0.57
CAPN9-201ENST00000271971 WDR7Q9Y4E6 1490 aa18.63■□□□□ 0.57
CAPN9-201ENST00000271971 ABCC5O15440 1437 aa18.61■□□□□ 0.57
CAPN9-201ENST00000271971 CROCC2H7BZ55 1655 aa18.6■□□□□ 0.57
CAPN9-201ENST00000271971 SAMD9LQ8IVG5 1584 aa18.6■□□□□ 0.57
CAPN9-201ENST00000271971 HFM1A2PYH4 1435 aa18.6■□□□□ 0.57
CAPN9-201ENST00000271971 ASXL2Q76L83 1435 aa18.6■□□□□ 0.57
CAPN9-201ENST00000271971 DHX57Q6P158 1386 aaKnown RBP18.6■□□□□ 0.57
CAPN9-201ENST00000271971 ARHGAP5Q13017 1502 aa18.6■□□□□ 0.57
CAPN9-201ENST00000271971 GCC2Q8IWJ2 1684 aa18.59■□□□□ 0.57
CAPN9-201ENST00000271971 NAIPQ13075 1403 aa18.58■□□□□ 0.56
CAPN9-201ENST00000271971 RRP7BPQ9NSQ0 103 aa18.57■□□□□ 0.56
CAPN9-201ENST00000271971 CYB5RLQ6IPT4 315 aa18.56■□□□□ 0.56
CAPN9-201ENST00000271971 ADGBQ8N7X0 1667 aa18.54■□□□□ 0.56
CAPN9-201ENST00000271971 NPM1P06748 294 aaKnown RBP eCLIP18.54■□□□□ 0.56
CAPN9-201ENST00000271971 KDM6BO15054 1643 aa18.54■□□□□ 0.56
CAPN9-201ENST00000271971 SYCP2Q9BX26 1530 aa18.53■□□□□ 0.56
CAPN9-201ENST00000271971 ABCA9Q8IUA7 1624 aa18.53■□□□□ 0.56
CAPN9-201ENST00000271971 AKNAQ7Z591 1439 aa18.52■□□□□ 0.56
CAPN9-201ENST00000271971 PLCH2O75038 1416 aa18.51■□□□□ 0.55
CAPN9-201ENST00000271971 HNRNPMP52272 730 aaKnown RBP eCLIP18.5■□□□□ 0.55
CAPN9-201ENST00000271971 MBD5Q9P267 1494 aa18.5■□□□□ 0.55
CAPN9-201ENST00000271971 ARHGEF5Q12774 1597 aa18.5■□□□□ 0.55
CAPN9-201ENST00000271971 SCAF1Q9H7N4 1312 aaKnown RBP18.5■□□□□ 0.55
CAPN9-201ENST00000271971 ROCK1Q13464 1354 aa18.49■□□□□ 0.55
CAPN9-201ENST00000271971 MAPKBP1O60336 1514 aa18.47■□□□□ 0.55
CAPN9-201ENST00000271971 CCDC141Q6ZP82 1450 aa18.46■□□□□ 0.55
CAPN9-201ENST00000271971 SHANK2Q9UPX8 1470 aa18.46■□□□□ 0.55
CAPN9-201ENST00000271971 C9orf84Q5VXU9 1444 aa18.46■□□□□ 0.55
CAPN9-201ENST00000271971 ADGRL2O95490 1459 aa18.46■□□□□ 0.54
CAPN9-201ENST00000271971 ABCC1P33527 1531 aa18.45■□□□□ 0.54
CAPN9-201ENST00000271971 ARHGEF12Q9NZN5 1544 aa18.45■□□□□ 0.54
CAPN9-201ENST00000271971 NCOA1Q15788 1441 aa18.44■□□□□ 0.54
CAPN9-201ENST00000271971 ARAP3Q8WWN8 1544 aa18.44■□□□□ 0.54
CAPN9-201ENST00000271971 EFCAB2Q5VUJ9 269 aa18.43■□□□□ 0.54
CAPN9-201ENST00000271971 PLEKHH2Q8IVE3 1493 aa18.42■□□□□ 0.54
CAPN9-201ENST00000271971 FANCAO15360 1455 aa18.41■□□□□ 0.54
CAPN9-201ENST00000271971 KIAA1107Q9UPP5 1409 aa18.41■□□□□ 0.54
CAPN9-201ENST00000271971 ANKRD30AQ9BXX3 1397 aa18.4■□□□□ 0.54
CAPN9-201ENST00000271971 TSPY4P0CV99 314 aa18.4■□□□□ 0.54
CAPN9-201ENST00000271971 TSPY10P0CW01 314 aa18.4■□□□□ 0.54
CAPN9-201ENST00000271971 CLSPNQ9HAW4 1339 aa18.4■□□□□ 0.54
CAPN9-201ENST00000271971 TRAPPC8Q9Y2L5 1435 aa18.37■□□□□ 0.53
CAPN9-201ENST00000271971 MAST1Q9Y2H9 1570 aa18.37■□□□□ 0.53
CAPN9-201ENST00000271971 CD109Q6YHK3 1445 aa18.36■□□□□ 0.53
CAPN9-201ENST00000271971 TRIM52Q96A61 297 aa18.35■□□□□ 0.53
CAPN9-201ENST00000271971 KIF15Q9NS87 1388 aa18.35■□□□□ 0.53
CAPN9-201ENST00000271971 ADGRL1O94910 1474 aa18.34■□□□□ 0.53
CAPN9-201ENST00000271971 RSPH4AQ5TD94 716 aa18.34■□□□□ 0.53
CAPN9-201ENST00000271971 ANKRD50Q9ULJ7 1429 aa18.34■□□□□ 0.53
CAPN9-201ENST00000271971 DENND4BO75064 1496 aaPredicted RBP18.33■□□□□ 0.52
CAPN9-201ENST00000271971 PLXNC1O60486 1568 aa18.32■□□□□ 0.52
CAPN9-201ENST00000271971 MAP3K4Q9Y6R4 1608 aa18.31■□□□□ 0.52
CAPN9-201ENST00000271971 DIP2BQ9P265 1576 aa18.31■□□□□ 0.52
CAPN9-201ENST00000271971 CFAP74Q9C0B2 1584 aa18.3■□□□□ 0.52
CAPN9-201ENST00000271971 AFAP1Q8N556 730 aa18.3■□□□□ 0.52
CAPN9-201ENST00000271971 SCAPERQ9BY12 1400 aa18.3■□□□□ 0.52
CAPN9-201ENST00000271971 SIN3AQ96ST3 1273 aa18.29■□□□□ 0.52
CAPN9-201ENST00000271971 ZFYVE16Q7Z3T8 1539 aa18.29■□□□□ 0.52
CAPN9-201ENST00000271971 GLI2P10070 1586 aa18.27■□□□□ 0.52
CAPN9-201ENST00000271971 TSPOAP1O95153 1857 aa18.26■□□□□ 0.51
CAPN9-201ENST00000271971 INO80Q9ULG1 1556 aaPredicted RBP18.26■□□□□ 0.51
CAPN9-201ENST00000271971 MPHOSPH9Q99550 1183 aa18.26■□□□□ 0.51
CAPN9-201ENST00000271971 PZPP20742 1482 aa18.26■□□□□ 0.51
CAPN9-201ENST00000271971 NEUROD1Q13562 356 aa18.25■□□□□ 0.51
CAPN9-201ENST00000271971 SPAG9O60271 1321 aaKnown RBP18.25■□□□□ 0.51
CAPN9-201ENST00000271971 FOXD1Q16676 465 aa18.24■□□□□ 0.51
CAPN9-201ENST00000271971 ATP7AQ04656 1500 aa18.24■□□□□ 0.51
CAPN9-201ENST00000271971 FAM69CQ0P6D2 419 aa18.24■□□□□ 0.51
CAPN9-201ENST00000271971 DUOX2Q9NRD8 1548 aa18.23■□□□□ 0.51
CAPN9-201ENST00000271971 KIF13AQ9H1H9 1805 aa18.22■□□□□ 0.51
CAPN9-201ENST00000271971 SLC4A1APQ9BWU0 796 aaKnown RBP18.22■□□□□ 0.51
CAPN9-201ENST00000271971 KIDINS220Q9ULH0 1771 aa18.21■□□□□ 0.5
CAPN9-201ENST00000271971 ZNF518AQ6AHZ1 1483 aa18.2■□□□□ 0.5
CAPN9-201ENST00000271971 NEO1Q92859 1461 aa18.2■□□□□ 0.5
CAPN9-201ENST00000271971 RTEL1-TNFRSF6BF6WH68 1400 aa18.2■□□□□ 0.5
CAPN9-201ENST00000271971 POGZQ7Z3K3 1410 aa18.2■□□□□ 0.5
CAPN9-201ENST00000271971 PPRC1Q5VV67 1664 aaKnown RBP18.2■□□□□ 0.5
CAPN9-201ENST00000271971 NUP155O75694 1391 aa18.19■□□□□ 0.5
CAPN9-201ENST00000271971 UNC13BO14795 1591 aa18.19■□□□□ 0.5
CAPN9-201ENST00000271971 KDM5DQ9BY66 1539 aa18.19■□□□□ 0.5
CAPN9-201ENST00000271971 KDM5CP41229 1560 aa18.18■□□□□ 0.5
CAPN9-201ENST00000271971 MYT1LQ9UL68 1186 aa18.18■□□□□ 0.5
CAPN9-201ENST00000271971 ACIN1Q9UKV3 1341 aaKnown RBP18.18■□□□□ 0.5
CAPN9-201ENST00000271971 ERBINQ96RT1 1412 aa18.18■□□□□ 0.5
CAPN9-201ENST00000271971 RICTORQ6R327 1708 aa18.16■□□□□ 0.5
CAPN9-201ENST00000271971 HECW2Q9P2P5 1572 aa18.15■□□□□ 0.5
CAPN9-201ENST00000271971 FAM135AQ9P2D6 1515 aa18.15■□□□□ 0.5
CAPN9-201ENST00000271971 RAPGEF3O95398 923 aa18.14■□□□□ 0.49
CAPN9-201ENST00000271971 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.13■□□□□ 0.49
CAPN9-201ENST00000271971 ANKRD30BQ9BXX2 1392 aa18.12■□□□□ 0.49
CAPN9-201ENST00000271971 PKD2Q13563 968 aa18.12■□□□□ 0.49
CAPN9-201ENST00000271971 IQGAP3Q86VI3 1631 aa18.12■□□□□ 0.49
CAPN9-201ENST00000271971 ABCA6Q8N139 1617 aa18.11■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms