RNA–Protein interactions for RNA: ENST00000271588.8

HMCN1-201, Transcript of hemicentin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMCN1, Length 18,208 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMCN1-201ENST00000271588 AMER1Q5JTC6 1135 aaPredicted RBP6.24□□□□□ -1.41
HMCN1-201ENST00000271588 PLEKHD1A6NEE1 506 aa6.23□□□□□ -1.41
HMCN1-201ENST00000271588 GPS2Q13227 327 aa6.23□□□□□ -1.41
HMCN1-201ENST00000271588 ZNF777Q9ULD5 760 aaPredicted RBP6.23□□□□□ -1.41
HMCN1-201ENST00000271588 KANK1Q14678 1352 aa6.23□□□□□ -1.41
HMCN1-201ENST00000271588 GOLGA6L4A6NEF3 574 aa6.23□□□□□ -1.41
HMCN1-201ENST00000271588 SCAPERQ9BY12 1400 aa6.23□□□□□ -1.41
HMCN1-201ENST00000271588 PDIA4P13667 645 aaKnown RBP6.22□□□□□ -1.41
HMCN1-201ENST00000271588 IPO9Q96P70 1041 aaKnown RBP6.22□□□□□ -1.41
HMCN1-201ENST00000271588 HSP90AB1P08238 724 aaKnown RBP6.22□□□□□ -1.41
HMCN1-201ENST00000271588 PABPN1Q86U42 306 aaKnown RBP eCLIP6.22□□□□□ -1.41
HMCN1-201ENST00000271588 TPM3P06753 285 aa6.22□□□□□ -1.41
HMCN1-201ENST00000271588 RWDD1Q9H446 243 aaPredicted RBP6.21□□□□□ -1.41
HMCN1-201ENST00000271588 TMF1P82094 1093 aa6.21□□□□□ -1.41
HMCN1-201ENST00000271588 SETQ01105 290 aaPredicted RBP6.21□□□□□ -1.41
HMCN1-201ENST00000271588 HDGFP51858 240 aaKnown RBP6.21□□□□□ -1.42
HMCN1-201ENST00000271588 UACAQ9BZF9 1416 aa6.2□□□□□ -1.42
HMCN1-201ENST00000271588 NINLQ9Y2I6 1382 aa6.2□□□□□ -1.42
HMCN1-201ENST00000271588 TAF3Q5VWG9 929 aa6.2□□□□□ -1.42
HMCN1-201ENST00000271588 CAVIN1Q6NZI2 390 aaKnown RBP6.2□□□□□ -1.42
HMCN1-201ENST00000271588 FBLN2P98095 1184 aa6.19□□□□□ -1.42
HMCN1-201ENST00000271588 ANKRD30AQ9BXX3 1397 aa6.19□□□□□ -1.42
HMCN1-201ENST00000271588 ABCC8Q09428 1581 aa6.19□□□□□ -1.42
HMCN1-201ENST00000271588 CFDP1Q9UEE9 299 aaPredicted RBP6.19□□□□□ -1.42
HMCN1-201ENST00000271588 LMOD3Q0VAK6 560 aa6.19□□□□□ -1.42
HMCN1-201ENST00000271588 CGNL1Q0VF96 1302 aa6.18□□□□□ -1.42
HMCN1-201ENST00000271588 CARD11Q9BXL7 1154 aa6.18□□□□□ -1.42
HMCN1-201ENST00000271588 RBM19Q9Y4C8 960 aaKnown RBP6.18□□□□□ -1.42
HMCN1-201ENST00000271588 HMMRO75330 724 aa6.18□□□□□ -1.42
HMCN1-201ENST00000271588 PDZRN4Q6ZMN7 1036 aaPredicted RBP6.18□□□□□ -1.42
HMCN1-201ENST00000271588 CCDC18Q5T9S5 1454 aa6.18□□□□□ -1.42
HMCN1-201ENST00000271588 TNNT3P45378 269 aaPredicted RBP6.18□□□□□ -1.42
HMCN1-201ENST00000271588 ZBED9Q6R2W3 1325 aa6.18□□□□□ -1.42
HMCN1-201ENST00000271588 KIF16BQ96L93 1317 aa6.18□□□□□ -1.42
HMCN1-201ENST00000271588 NOM1Q5C9Z4 860 aaKnown RBP6.17□□□□□ -1.42
HMCN1-201ENST00000271588 CENPQQ7L2Z9 268 aaPredicted RBP6.17□□□□□ -1.42
HMCN1-201ENST00000271588 SALL2Q9Y467 1007 aaPredicted RBP6.17□□□□□ -1.42
HMCN1-201ENST00000271588 UBE2Q2Q8WVN8 375 aa6.17□□□□□ -1.42
HMCN1-201ENST00000271588 CUX1P39880 1505 aa6.17□□□□□ -1.42
HMCN1-201ENST00000271588 HSP90AA2PQ14568 343 aaPredicted RBP6.17□□□□□ -1.42
HMCN1-201ENST00000271588 NLRP13Q86W25 1043 aa6.17□□□□□ -1.42
HMCN1-201ENST00000271588 TOP2AP11388 1531 aaKnown RBP6.17□□□□□ -1.42
HMCN1-201ENST00000271588 HMGN5P82970 282 aaKnown RBP6.17□□□□□ -1.42
HMCN1-201ENST00000271588 CCDC70Q6NSX1 233 aa6.17□□□□□ -1.42
HMCN1-201ENST00000271588 ACBD3Q9H3P7 528 aa6.17□□□□□ -1.42
HMCN1-201ENST00000271588 CHMP7Q8WUX9 453 aaPredicted RBP6.16□□□□□ -1.42
HMCN1-201ENST00000271588 ROCK1Q13464 1354 aa6.16□□□□□ -1.42
HMCN1-201ENST00000271588 TEX35Q5T0J7 233 aa6.16□□□□□ -1.42
HMCN1-201ENST00000271588 GPATCH3Q96I76 525 aa6.16□□□□□ -1.42
HMCN1-201ENST00000271588 ST18O60284 1047 aa6.16□□□□□ -1.42
HMCN1-201ENST00000271588 WASHC2AQ641Q2 1341 aa6.16□□□□□ -1.42
HMCN1-201ENST00000271588 WASHC2CQ9Y4E1 1318 aa6.16□□□□□ -1.42
HMCN1-201ENST00000271588 CARMIL2Q6F5E8 1435 aa6.16□□□□□ -1.42
HMCN1-201ENST00000271588 KIF15Q9NS87 1388 aa6.16□□□□□ -1.42
HMCN1-201ENST00000271588 LRRFIP1Q32MZ4 808 aaKnown RBP6.16□□□□□ -1.42
HMCN1-201ENST00000271588 P3H3Q8IVL6 736 aa6.15□□□□□ -1.42
HMCN1-201ENST00000271588 CDR1P51861 262 aa6.15□□□□□ -1.42
HMCN1-201ENST00000271588 KIAA1211Q6ZU35 1233 aa6.15□□□□□ -1.42
HMCN1-201ENST00000271588 CCDC66A2RUB6 948 aa6.15□□□□□ -1.43
HMCN1-201ENST00000271588 CNTLNQ9NXG0 1405 aa6.15□□□□□ -1.43
HMCN1-201ENST00000271588 TPM2P07951 284 aa6.15□□□□□ -1.43
HMCN1-201ENST00000271588 TSPYL1Q9H0U9 437 aa6.14□□□□□ -1.43
HMCN1-201ENST00000271588 CWC15Q9P013 229 aaKnown RBP6.14□□□□□ -1.43
HMCN1-201ENST00000271588 CCP110O43303 1012 aa6.14□□□□□ -1.43
HMCN1-201ENST00000271588 ARGLU1Q9NWB6 273 aaPredicted RBP6.13□□□□□ -1.43
HMCN1-201ENST00000271588 RCAN3Q9UKA8 241 aa6.13□□□□□ -1.43
HMCN1-201ENST00000271588 MIA2Q96PC5 1412 aa6.13□□□□□ -1.43
HMCN1-201ENST00000271588 CHGAP10645 457 aaKnown RBP6.13□□□□□ -1.43
HMCN1-201ENST00000271588 CARMIL1Q5VZK9 1371 aa6.13□□□□□ -1.43
HMCN1-201ENST00000271588 GSE1Q14687 1217 aa6.12□□□□□ -1.43
HMCN1-201ENST00000271588 KIF7Q2M1P5 1343 aa6.12□□□□□ -1.43
HMCN1-201ENST00000271588 DIAPH3Q9NSV4 1193 aa6.12□□□□□ -1.43
HMCN1-201ENST00000271588 TPM1P09493 284 aa6.12□□□□□ -1.43
HMCN1-201ENST00000271588 PDCL2Q8N4E4 241 aa6.12□□□□□ -1.43
HMCN1-201ENST00000271588 FGD1P98174 961 aa6.12□□□□□ -1.43
HMCN1-201ENST00000271588 PPP1R15AO75807 674 aaPredicted RBP6.12□□□□□ -1.43
HMCN1-201ENST00000271588 LETM1O95202 739 aaPredicted RBP6.12□□□□□ -1.43
HMCN1-201ENST00000271588 FAM161AQ3B820 660 aa6.12□□□□□ -1.43
HMCN1-201ENST00000271588 APPP05067 770 aa6.11□□□□□ -1.43
HMCN1-201ENST00000271588 CHIC2Q9UKJ5 165 aa6.11□□□□□ -1.43
HMCN1-201ENST00000271588 MCM2P49736 904 aa6.11□□□□□ -1.43
HMCN1-201ENST00000271588 NUCB2P80303 420 aa6.11□□□□□ -1.43
HMCN1-201ENST00000271588 REC8O95072 547 aa6.1□□□□□ -1.43
HMCN1-201ENST00000271588 ERICH3Q5RHP9 1530 aa6.1□□□□□ -1.43
HMCN1-201ENST00000271588 HOOK1Q9UJC3 728 aaKnown RBP6.1□□□□□ -1.43
HMCN1-201ENST00000271588 ERCC4Q92889 916 aaPredicted RBP6.1□□□□□ -1.43
HMCN1-201ENST00000271588 KCNJ4P48050 445 aa6.1□□□□□ -1.43
HMCN1-201ENST00000271588 C14orf37Q86TY3 774 aa6.1□□□□□ -1.43
HMCN1-201ENST00000271588 DRC7Q8IY82 874 aa6.1□□□□□ -1.43
HMCN1-201ENST00000271588 PLEKHH2Q8IVE3 1493 aa6.1□□□□□ -1.43
HMCN1-201ENST00000271588 PDS5BQ9NTI5 1447 aa6.1□□□□□ -1.43
HMCN1-201ENST00000271588 MYBBP1AQ9BQG0 1328 aaKnown RBP6.1□□□□□ -1.43
HMCN1-201ENST00000271588 MBD3O95983 291 aa6.1□□□□□ -1.43
HMCN1-201ENST00000271588 CT47B1P0C2W7 299 aaPredicted RBP6.1□□□□□ -1.43
HMCN1-201ENST00000271588 CCDC144AA2RUR9 1427 aa6.09□□□□□ -1.43
HMCN1-201ENST00000271588 CCDC7Q96M83 1385 aa6.09□□□□□ -1.43
HMCN1-201ENST00000271588 USP8P40818 1118 aa6.09□□□□□ -1.43
HMCN1-201ENST00000271588 TXLNBQ8N3L3 684 aa6.09□□□□□ -1.43
HMCN1-201ENST00000271588 TULP1O00294 542 aaPredicted RBP6.09□□□□□ -1.43
HMCN1-201ENST00000271588 SPAG9O60271 1321 aaKnown RBP6.09□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms