RNA–Protein interactions for RNA: ENST00000271324.5

CD53-201, Transcript of CD53 molecule, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CD53, Length 1,505 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD53-201ENST00000271324 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP10.69□□□□□ -0.7
CD53-201ENST00000271324 ARHGEF40Q8TER5 1519 aa10.69□□□□□ -0.7
CD53-201ENST00000271324 LMTK3Q96Q04 1460 aa10.68□□□□□ -0.7
CD53-201ENST00000271324 PCF11O94913 1555 aaKnown RBP10.68□□□□□ -0.7
CD53-201ENST00000271324 FBXO41Q8TF61 875 aa10.68□□□□□ -0.7
CD53-201ENST00000271324 AKNAQ7Z591 1439 aa10.67□□□□□ -0.7
CD53-201ENST00000271324 PLEKHD1A6NEE1 506 aa10.66□□□□□ -0.7
CD53-201ENST00000271324 FANCAO15360 1455 aa10.66□□□□□ -0.7
CD53-201ENST00000271324 DENND4BO75064 1496 aaPredicted RBP10.66□□□□□ -0.7
CD53-201ENST00000271324 CDK13Q14004 1512 aaKnown RBP10.66□□□□□ -0.7
CD53-201ENST00000271324 CFAP74Q9C0B2 1584 aa10.65□□□□□ -0.7
CD53-201ENST00000271324 HSPA2P54652 639 aa10.65□□□□□ -0.7
CD53-201ENST00000271324 YEATS2Q9ULM3 1422 aa10.64□□□□□ -0.71
CD53-201ENST00000271324 EHMT2Q96KQ7 1210 aa10.64□□□□□ -0.71
CD53-201ENST00000271324 FER1L4A9Z1Z3 1794 aa10.64□□□□□ -0.71
CD53-201ENST00000271324 HECW1Q76N89 1606 aa10.63□□□□□ -0.71
CD53-201ENST00000271324 PELP1Q8IZL8 1130 aaKnown RBP10.63□□□□□ -0.71
CD53-201ENST00000271324 ZMYM4Q5VZL5 1548 aa10.62□□□□□ -0.71
CD53-201ENST00000271324 MLECQ14165 292 aa10.62□□□□□ -0.71
CD53-201ENST00000271324 ZFYVE16Q7Z3T8 1539 aa10.62□□□□□ -0.71
CD53-201ENST00000271324 EFCAB5A4FU69 1503 aa10.61□□□□□ -0.71
CD53-201ENST00000271324 LRRIQ1Q96JM4 1722 aa10.61□□□□□ -0.71
CD53-201ENST00000271324 MYO5CQ9NQX4 1742 aa10.6□□□□□ -0.71
CD53-201ENST00000271324 HRCP23327 699 aa10.6□□□□□ -0.71
CD53-201ENST00000271324 EEA1Q15075 1411 aa10.6□□□□□ -0.71
CD53-201ENST00000271324 KIF14Q15058 1648 aa10.59□□□□□ -0.71
CD53-201ENST00000271324 SCAPERQ9BY12 1400 aa10.59□□□□□ -0.71
CD53-201ENST00000271324 SP7Q8TDD2 431 aaPredicted RBP10.58□□□□□ -0.72
CD53-201ENST00000271324 ATP1B4Q9UN42 357 aaPredicted RBP10.58□□□□□ -0.72
CD53-201ENST00000271324 PLCH2O75038 1416 aa10.58□□□□□ -0.72
CD53-201ENST00000271324 POGZQ7Z3K3 1410 aa10.57□□□□□ -0.72
CD53-201ENST00000271324 CEBPAP49715 358 aaPredicted RBP10.56□□□□□ -0.72
CD53-201ENST00000271324 MAGI2Q86UL8 1455 aa10.56□□□□□ -0.72
CD53-201ENST00000271324 PREX1Q8TCU6 1659 aa10.56□□□□□ -0.72
CD53-201ENST00000271324 STRCQ7RTU9 1775 aa10.56□□□□□ -0.72
CD53-201ENST00000271324 CDC42BPBQ9Y5S2 1711 aa10.55□□□□□ -0.72
CD53-201ENST00000271324 ARHGEF12Q9NZN5 1544 aa10.55□□□□□ -0.72
CD53-201ENST00000271324 ARHGAP35Q9NRY4 1499 aa10.54□□□□□ -0.72
CD53-201ENST00000271324 ATP10AO60312 1499 aa10.54□□□□□ -0.72
CD53-201ENST00000271324 UBTFP17480 764 aaKnown RBP10.53□□□□□ -0.72
CD53-201ENST00000271324 CERKQ8TCT0 537 aa10.53□□□□□ -0.72
CD53-201ENST00000271324 EFCAB2Q5VUJ9 269 aa10.52□□□□□ -0.73
CD53-201ENST00000271324 C9orf84Q5VXU9 1444 aa10.52□□□□□ -0.73
CD53-201ENST00000271324 AFAP1Q8N556 730 aa10.52□□□□□ -0.73
CD53-201ENST00000271324 ARHGAP5Q13017 1502 aa10.51□□□□□ -0.73
CD53-201ENST00000271324 C3P01024 1663 aa10.51□□□□□ -0.73
CD53-201ENST00000271324 KDM5CP41229 1560 aa10.5□□□□□ -0.73
CD53-201ENST00000271324 DIP2CQ9Y2E4 1556 aa10.5□□□□□ -0.73
CD53-201ENST00000271324 SETD1BQ9UPS6 1966 aaKnown RBP10.5□□□□□ -0.73
CD53-201ENST00000271324 FMN1Q68DA7 1419 aa10.5□□□□□ -0.73
CD53-201ENST00000271324 ABCA6Q8N139 1617 aa10.5□□□□□ -0.73
CD53-201ENST00000271324 TROQ12816 1431 aaPredicted RBP10.49□□□□□ -0.73
CD53-201ENST00000271324 ZNF518AQ6AHZ1 1483 aa10.49□□□□□ -0.73
CD53-201ENST00000271324 MYT1LQ9UL68 1186 aa10.48□□□□□ -0.73
CD53-201ENST00000271324 ITSN2Q9NZM3 1697 aa10.48□□□□□ -0.73
CD53-201ENST00000271324 CDC42BPAQ5VT25 1732 aa10.48□□□□□ -0.73
CD53-201ENST00000271324 PREX2Q70Z35 1606 aa10.48□□□□□ -0.73
CD53-201ENST00000271324 KIDINS220Q9ULH0 1771 aa10.47□□□□□ -0.73
CD53-201ENST00000271324 CDK11AQ9UQ88 783 aaPredicted RBP10.47□□□□□ -0.73
CD53-201ENST00000271324 TRAPPC8Q9Y2L5 1435 aa10.46□□□□□ -0.74
CD53-201ENST00000271324 ABCC1P33527 1531 aa10.45□□□□□ -0.74
CD53-201ENST00000271324 REREQ9P2R6 1566 aa10.44□□□□□ -0.74
CD53-201ENST00000271324 CLIP1P30622 1438 aa10.44□□□□□ -0.74
CD53-201ENST00000271324 MLH3Q9UHC1 1453 aa10.44□□□□□ -0.74
CD53-201ENST00000271324 UHRF1BP1Q6BDS2 1440 aa10.44□□□□□ -0.74
CD53-201ENST00000271324 SUPT6HQ7KZ85 1726 aaKnown RBP10.43□□□□□ -0.74
CD53-201ENST00000271324 ILDR2Q71H61 639 aa10.42□□□□□ -0.74
CD53-201ENST00000271324 SAMD9LQ8IVG5 1584 aa10.41□□□□□ -0.74
CD53-201ENST00000271324 AGLP35573 1532 aa10.41□□□□□ -0.74
CD53-201ENST00000271324 NCBP3Q53F19 620 aaKnown RBP10.4□□□□□ -0.74
CD53-201ENST00000271324 CASKIN1Q8WXD9 1431 aa10.4□□□□□ -0.74
CD53-201ENST00000271324 CLTCQ00610 1675 aaKnown RBP10.39□□□□□ -0.75
CD53-201ENST00000271324 ZNF777Q9ULD5 760 aaPredicted RBP10.39□□□□□ -0.75
CD53-201ENST00000271324 LTBP4Q8N2S1 1624 aa10.39□□□□□ -0.75
CD53-201ENST00000271324 DISP3Q9P2K9 1392 aa10.39□□□□□ -0.75
CD53-201ENST00000271324 CCDC18Q5T9S5 1454 aa10.39□□□□□ -0.75
CD53-201ENST00000271324 SYCP2Q9BX26 1530 aa10.38□□□□□ -0.75
CD53-201ENST00000271324 MROH2AA6NES4 1674 aa10.38□□□□□ -0.75
CD53-201ENST00000271324 PTPRTO14522 1441 aa10.38□□□□□ -0.75
CD53-201ENST00000271324 HNRNPMP52272 730 aaKnown RBP eCLIP10.38□□□□□ -0.75
CD53-201ENST00000271324 ESF1Q9H501 851 aaKnown RBP10.38□□□□□ -0.75
CD53-201ENST00000271324 CAMSAP1Q5T5Y3 1602 aa10.37□□□□□ -0.75
CD53-201ENST00000271324 NCOA1Q15788 1441 aa10.36□□□□□ -0.75
CD53-201ENST00000271324 GPATCH8Q9UKJ3 1502 aaKnown RBP10.36□□□□□ -0.75
CD53-201ENST00000271324 MYT1Q01538 1121 aa10.36□□□□□ -0.75
CD53-201ENST00000271324 NCKAP5LQ9HCH0 1330 aa10.35□□□□□ -0.75
CD53-201ENST00000271324 ZMYM3Q14202 1370 aa10.34□□□□□ -0.75
CD53-201ENST00000271324 FYCO1Q9BQS8 1478 aa10.34□□□□□ -0.75
CD53-201ENST00000271324 INO80Q9ULG1 1556 aaPredicted RBP10.34□□□□□ -0.75
CD53-201ENST00000271324 MYO3AQ8NEV4 1616 aa10.34□□□□□ -0.75
CD53-201ENST00000271324 ATP7AQ04656 1500 aa10.34□□□□□ -0.75
CD53-201ENST00000271324 SPAG9O60271 1321 aaKnown RBP10.34□□□□□ -0.75
CD53-201ENST00000271324 SPATA31D1Q6ZQQ2 1576 aa10.34□□□□□ -0.75
CD53-201ENST00000271324 CNTLNQ9NXG0 1405 aa10.33□□□□□ -0.76
CD53-201ENST00000271324 PLXNC1O60486 1568 aa10.33□□□□□ -0.76
CD53-201ENST00000271324 ZNF142P52746 1687 aaPredicted RBP10.32□□□□□ -0.76
CD53-201ENST00000271324 ZNF335Q9H4Z2 1342 aaPredicted RBP10.31□□□□□ -0.76
CD53-201ENST00000271324 ADGBQ8N7X0 1667 aa10.31□□□□□ -0.76
CD53-201ENST00000271324 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.31□□□□□ -0.76
CD53-201ENST00000271324 NPATQ14207 1427 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms