RNA–Protein interactions for RNA: ENST00000269834.1

ZIM3-201, Transcript of zinc finger imprinted 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZIM3, Length 2,627 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZIM3-201ENST00000269834 RIMBP3BA6NNM3 1639 aa11.35□□□□□ -0.59
ZIM3-201ENST00000269834 RIMBP3Q9UFD9 1639 aa11.35□□□□□ -0.59
ZIM3-201ENST00000269834 ERICH3Q5RHP9 1530 aa11.34□□□□□ -0.59
ZIM3-201ENST00000269834 SEMA3EO15041 775 aa11.34□□□□□ -0.59
ZIM3-201ENST00000269834 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.32□□□□□ -0.6
ZIM3-201ENST00000269834 STK25O00506 426 aa11.31□□□□□ -0.6
ZIM3-201ENST00000269834 HNRNPUL2Q1KMD3 747 aaKnown RBP11.3□□□□□ -0.6
ZIM3-201ENST00000269834 MIER1Q8N108 512 aa11.3□□□□□ -0.6
ZIM3-201ENST00000269834 HSP90B1P14625 803 aaKnown RBP11.3□□□□□ -0.6
ZIM3-201ENST00000269834 POLA2Q14181 598 aa11.3□□□□□ -0.6
ZIM3-201ENST00000269834 THOC2Q8NI27 1593 aaKnown RBP11.29□□□□□ -0.6
ZIM3-201ENST00000269834 ZMYND10O75800 440 aa11.29□□□□□ -0.6
ZIM3-201ENST00000269834 WDR70Q9NW82 654 aa11.29□□□□□ -0.6
ZIM3-201ENST00000269834 RAPGEF2Q9Y4G8 1499 aa11.28□□□□□ -0.6
ZIM3-201ENST00000269834 CLUAP1Q96AJ1 413 aa11.27□□□□□ -0.6
ZIM3-201ENST00000269834 CLSPNQ9HAW4 1339 aa11.26□□□□□ -0.61
ZIM3-201ENST00000269834 KDM4CQ9H3R0 1056 aa11.25□□□□□ -0.61
ZIM3-201ENST00000269834 OSCARQ8IYS5 282 aa11.25□□□□□ -0.61
ZIM3-201ENST00000269834 DHX37Q8IY37 1157 aaKnown RBP11.24□□□□□ -0.61
ZIM3-201ENST00000269834 MFAP1P55081 439 aaKnown RBP11.24□□□□□ -0.61
ZIM3-201ENST00000269834 PRXQ9BXM0 1461 aa11.23□□□□□ -0.61
ZIM3-201ENST00000269834 TMCO4Q5TGY1 634 aa11.22□□□□□ -0.61
ZIM3-201ENST00000269834 GZF1Q9H116 711 aaPredicted RBP11.22□□□□□ -0.61
ZIM3-201ENST00000269834 PRDM2Q13029 1718 aa11.21□□□□□ -0.61
ZIM3-201ENST00000269834 ARAP1Q96P48 1450 aa11.21□□□□□ -0.62
ZIM3-201ENST00000269834 PUS7Q96PZ0 661 aaKnown RBP11.19□□□□□ -0.62
ZIM3-201ENST00000269834 DCAF8L1A6NGE4 600 aa11.18□□□□□ -0.62
ZIM3-201ENST00000269834 USP35Q9P2H5 1018 aa11.17□□□□□ -0.62
ZIM3-201ENST00000269834 RRBP1Q9P2E9 1410 aaKnown RBP11.17□□□□□ -0.62
ZIM3-201ENST00000269834 HMGB1P09429 215 aaKnown RBP11.15□□□□□ -0.62
ZIM3-201ENST00000269834 FAM117AQ9C073 453 aa11.15□□□□□ -0.62
ZIM3-201ENST00000269834 TESPA1A2RU30 521 aaPredicted RBP11.15□□□□□ -0.62
ZIM3-201ENST00000269834 DHX57Q6P158 1386 aaKnown RBP11.14□□□□□ -0.63
ZIM3-201ENST00000269834 RIOK3O14730 519 aaKnown RBP11.14□□□□□ -0.63
ZIM3-201ENST00000269834 TRAIPQ9BWF2 469 aa11.14□□□□□ -0.63
ZIM3-201ENST00000269834 CUX1P39880 1505 aa11.14□□□□□ -0.63
ZIM3-201ENST00000269834 BCL11BQ9C0K0 894 aaPredicted RBP11.12□□□□□ -0.63
ZIM3-201ENST00000269834 STK24Q9Y6E0 443 aa11.12□□□□□ -0.63
ZIM3-201ENST00000269834 ARHGEF11O15085 1522 aa11.11□□□□□ -0.63
ZIM3-201ENST00000269834 MAP3K1Q13233 1512 aa11.11□□□□□ -0.63
ZIM3-201ENST00000269834 IRF5Q13568 498 aa11.11□□□□□ -0.63
ZIM3-201ENST00000269834 ZNF777Q9ULD5 760 aaPredicted RBP11.11□□□□□ -0.63
ZIM3-201ENST00000269834 BARGINQ6ZT62 677 aa11.11□□□□□ -0.63
ZIM3-201ENST00000269834 RETREG2Q8NC44 543 aa11.11□□□□□ -0.63
ZIM3-201ENST00000269834 KIF27Q86VH2 1401 aa11.11□□□□□ -0.63
ZIM3-201ENST00000269834 TRAK2O60296 914 aa11.1□□□□□ -0.63
ZIM3-201ENST00000269834 CFTRP13569 1480 aa11.07□□□□□ -0.64
ZIM3-201ENST00000269834 AK7Q96M32 723 aa11.06□□□□□ -0.64
ZIM3-201ENST00000269834 YTHDC1Q96MU7 727 aaKnown RBP11.06□□□□□ -0.64
ZIM3-201ENST00000269834 ARHGAP35Q9NRY4 1499 aa11.06□□□□□ -0.64
ZIM3-201ENST00000269834 ONECUT3O60422 494 aaPredicted RBP11.05□□□□□ -0.64
ZIM3-201ENST00000269834 STAG3Q9UJ98 1225 aa11.05□□□□□ -0.64
ZIM3-201ENST00000269834 TIAM1Q13009 1591 aa11.05□□□□□ -0.64
ZIM3-201ENST00000269834 CFAP43Q8NDM7 1665 aa11.05□□□□□ -0.64
ZIM3-201ENST00000269834 E9PSI1 815 aa11.05□□□□□ -0.64
ZIM3-201ENST00000269834 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.04□□□□□ -0.64
ZIM3-201ENST00000269834 PDE4DQ08499 809 aa11.04□□□□□ -0.64
ZIM3-201ENST00000269834 ZFP91Q96JP5 570 aaPredicted RBP11.04□□□□□ -0.64
ZIM3-201ENST00000269834 CCNB3Q8WWL7 1395 aa11.03□□□□□ -0.64
ZIM3-201ENST00000269834 ARHGEF1Q92888 912 aaKnown RBP11.03□□□□□ -0.64
ZIM3-201ENST00000269834 PLEKHG3A1L390 1219 aa11.03□□□□□ -0.64
ZIM3-201ENST00000269834 POLR3GLQ9BT43 218 aa11.03□□□□□ -0.64
ZIM3-201ENST00000269834 CADPSQ9ULU8 1353 aa11.02□□□□□ -0.65
ZIM3-201ENST00000269834 KRI1Q8N9T8 703 aaKnown RBP11.02□□□□□ -0.65
ZIM3-201ENST00000269834 FAM177A1Q8N128 213 aaPredicted RBP11.01□□□□□ -0.65
ZIM3-201ENST00000269834 FBXW7Q969H0 707 aa11.01□□□□□ -0.65
ZIM3-201ENST00000269834 TRIM66O15016 1216 aa11□□□□□ -0.65
ZIM3-201ENST00000269834 RBM26Q5T8P6 1007 aaKnown RBP11□□□□□ -0.65
ZIM3-201ENST00000269834 MAPKBP1O60336 1514 aa10.99□□□□□ -0.65
ZIM3-201ENST00000269834 KANK4Q5T7N3 995 aaPredicted RBP10.99□□□□□ -0.65
ZIM3-201ENST00000269834 LAMC3Q9Y6N6 1575 aa10.99□□□□□ -0.65
ZIM3-201ENST00000269834 ZNF692Q9BU19 519 aaPredicted RBP10.98□□□□□ -0.65
ZIM3-201ENST00000269834 FLIIQ13045 1269 aa10.97□□□□□ -0.65
ZIM3-201ENST00000269834 VGFO15240 615 aaPredicted RBP10.95□□□□□ -0.66
ZIM3-201ENST00000269834 POM121Q96HA1 1249 aa10.95□□□□□ -0.66
ZIM3-201ENST00000269834 LRRC9Q6ZRR7 1453 aa10.95□□□□□ -0.66
ZIM3-201ENST00000269834 E2F4Q16254 413 aa10.94□□□□□ -0.66
ZIM3-201ENST00000269834 ILDR2Q71H61 639 aa10.94□□□□□ -0.66
ZIM3-201ENST00000269834 A6NJR5 290 aa10.93□□□□□ -0.66
ZIM3-201ENST00000269834 FHAD1B1AJZ9 1412 aa10.93□□□□□ -0.66
ZIM3-201ENST00000269834 RAB3GAP2Q9H2M9 1393 aa10.93□□□□□ -0.66
ZIM3-201ENST00000269834 EFCAB5A4FU69 1503 aa10.92□□□□□ -0.66
ZIM3-201ENST00000269834 PCF11O94913 1555 aaKnown RBP10.92□□□□□ -0.66
ZIM3-201ENST00000269834 RNF39Q9H2S5 420 aa10.91□□□□□ -0.66
ZIM3-201ENST00000269834 SETD5Q9C0A6 1442 aa10.91□□□□□ -0.66
ZIM3-201ENST00000269834 SUPT16HQ9Y5B9 1047 aaKnown RBP10.91□□□□□ -0.66
ZIM3-201ENST00000269834 IGF1RP08069 1367 aa10.91□□□□□ -0.66
ZIM3-201ENST00000269834 CTTNBP2Q8WZ74 1663 aa10.9□□□□□ -0.66
ZIM3-201ENST00000269834 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.9□□□□□ -0.66
ZIM3-201ENST00000269834 AQRO60306 1485 aaKnown RBP eCLIP10.9□□□□□ -0.67
ZIM3-201ENST00000269834 CUL7Q14999 1698 aa10.89□□□□□ -0.67
ZIM3-201ENST00000269834 FGD5Q6ZNL6 1462 aa10.89□□□□□ -0.67
ZIM3-201ENST00000269834 FYCO1Q9BQS8 1478 aa10.89□□□□□ -0.67
ZIM3-201ENST00000269834 CCDC97Q96F63 343 aaPredicted RBP10.89□□□□□ -0.67
ZIM3-201ENST00000269834 RYDENQ9NUL5 291 aaKnown RBP10.89□□□□□ -0.67
ZIM3-201ENST00000269834 DCAF8Q5TAQ9 597 aa10.88□□□□□ -0.67
ZIM3-201ENST00000269834 FANCD2Q9BXW9 1451 aa10.88□□□□□ -0.67
ZIM3-201ENST00000269834 PDS5BQ9NTI5 1447 aa10.87□□□□□ -0.67
ZIM3-201ENST00000269834 BRD2P25440 801 aaKnown RBP10.87□□□□□ -0.67
ZIM3-201ENST00000269834 GPIHBP1Q8IV16 184 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms