RNA–Protein interactions for RNA: ENST00000267260.4

SRRM4-201, Transcript of serine/arginine repetitive matrix 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRRM4, Length 8,477 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM4-201ENST00000267260 ZNF771Q7L3S4 317 aaPredicted RBP15.17■□□□□ 0.02
SRRM4-201ENST00000267260 CHMP4AQ9BY43 222 aa15.17■□□□□ 0.02
SRRM4-201ENST00000267260 CEP89Q96ST8 783 aa15.17■□□□□ 0.02
SRRM4-201ENST00000267260 NEUROD2Q15784 382 aa15.17■□□□□ 0.02
SRRM4-201ENST00000267260 RRP7BPQ9NSQ0 103 aa15.16■□□□□ 0.02
SRRM4-201ENST00000267260 RBM19Q9Y4C8 960 aaKnown RBP15.16■□□□□ 0.02
SRRM4-201ENST00000267260 POGKQ9P215 609 aa15.15■□□□□ 0.02
SRRM4-201ENST00000267260 RRP12Q5JTH9 1297 aaKnown RBP15.15■□□□□ 0.02
SRRM4-201ENST00000267260 B4GALNT3Q6L9W6 998 aa15.15■□□□□ 0.02
SRRM4-201ENST00000267260 CCDC70Q6NSX1 233 aa15.15■□□□□ 0.02
SRRM4-201ENST00000267260 NOM1Q5C9Z4 860 aaKnown RBP15.15■□□□□ 0.02
SRRM4-201ENST00000267260 TEX35Q5T0J7 233 aa15.15■□□□□ 0.02
SRRM4-201ENST00000267260 ISY1Q9ULR0 285 aaKnown RBP15.14■□□□□ 0.01
SRRM4-201ENST00000267260 CHMP7Q8WUX9 453 aaPredicted RBP15.14■□□□□ 0.01
SRRM4-201ENST00000267260 APPP05067 770 aa15.13■□□□□ 0.01
SRRM4-201ENST00000267260 RGL3Q3MIN7 710 aa15.12■□□□□ 0.01
SRRM4-201ENST00000267260 U2SURPO15042 1029 aaKnown RBP15.12■□□□□ 0.01
SRRM4-201ENST00000267260 RTF1Q92541 710 aaKnown RBP15.11■□□□□ 0.01
SRRM4-201ENST00000267260 TMF1P82094 1093 aa15.11■□□□□ 0.01
SRRM4-201ENST00000267260 KANK1Q14678 1352 aa15.11■□□□□ 0.01
SRRM4-201ENST00000267260 PLEKHD1A6NEE1 506 aa15.1■□□□□ 0.01
SRRM4-201ENST00000267260 KIF3AQ9Y496 699 aa15.1■□□□□ 0.01
SRRM4-201ENST00000267260 TSR1Q2NL82 804 aaKnown RBP15.1■□□□□ 0.01
SRRM4-201ENST00000267260 HDAC5Q9UQL6 1122 aa15.1■□□□□ 0.01
SRRM4-201ENST00000267260 PATL2C9JE40 543 aaKnown RBP15.09■□□□□ 0.01
SRRM4-201ENST00000267260 PMFBP1Q8TBY8 1022 aa15.08■□□□□ 0
SRRM4-201ENST00000267260 TCERG1O14776 1098 aaKnown RBP15.08■□□□□ 0
SRRM4-201ENST00000267260 HDGFP51858 240 aaKnown RBP15.07■□□□□ 0
SRRM4-201ENST00000267260 TMX4Q9H1E5 349 aaPredicted RBP15.07■□□□□ 0
SRRM4-201ENST00000267260 RWDD1Q9H446 243 aaPredicted RBP15.07■□□□□ 0
SRRM4-201ENST00000267260 CC2D1BQ5T0F9 858 aaKnown RBP15.06■□□□□ 0
SRRM4-201ENST00000267260 CHMP4CQ96CF2 233 aa15.06■□□□□ 0
SRRM4-201ENST00000267260 CEP162Q5TB80 1403 aa15.06■□□□□ 0
SRRM4-201ENST00000267260 DDX11L8A8MPP1 907 aa15.05■□□□□ 0
SRRM4-201ENST00000267260 CCER2I3L3R5 266 aa15.05■□□□□ -0
SRRM4-201ENST00000267260 SLKQ9H2G2 1235 aaPredicted RBP15.05■□□□□ -0
SRRM4-201ENST00000267260 TPM2P07951 284 aa15.04■□□□□ -0
SRRM4-201ENST00000267260 TPM1P09493 284 aa15.04■□□□□ -0
SRRM4-201ENST00000267260 PDE4CQ08493 712 aa15.04■□□□□ -0
SRRM4-201ENST00000267260 LMOD2Q6P5Q4 547 aa15.04■□□□□ -0
SRRM4-201ENST00000267260 HSP90B1P14625 803 aaKnown RBP15.04■□□□□ -0
SRRM4-201ENST00000267260 KTN1Q86UP2 1357 aaKnown RBP15.03■□□□□ -0
SRRM4-201ENST00000267260 CEP164Q9UPV0 1460 aa15.03■□□□□ -0
SRRM4-201ENST00000267260 HMMRO75330 724 aa15.02■□□□□ -0
SRRM4-201ENST00000267260 ST18O60284 1047 aa15.02■□□□□ -0
SRRM4-201ENST00000267260 RASSF8Q8NHQ8 419 aa15.02■□□□□ -0
SRRM4-201ENST00000267260 CFDP1Q9UEE9 299 aaPredicted RBP15.02■□□□□ -0
SRRM4-201ENST00000267260 IPO9Q96P70 1041 aaKnown RBP15.02□□□□□ -0.01
SRRM4-201ENST00000267260 FHAD1B1AJZ9 1412 aa15.02□□□□□ -0.01
SRRM4-201ENST00000267260 KIF16BQ96L93 1317 aa15.01□□□□□ -0.01
SRRM4-201ENST00000267260 CCAR2Q8N163 923 aaKnown RBP15□□□□□ -0.01
SRRM4-201ENST00000267260 GOLGA6L19H0YKK7 550 aa15□□□□□ -0.01
SRRM4-201ENST00000267260 TPD52L1Q16890 204 aaPredicted RBP14.99□□□□□ -0.01
SRRM4-201ENST00000267260 ATP6V1DQ9Y5K8 247 aa14.99□□□□□ -0.01
SRRM4-201ENST00000267260 SPAG9O60271 1321 aaKnown RBP14.99□□□□□ -0.01
SRRM4-201ENST00000267260 CREBRFQ8IUR6 639 aa14.98□□□□□ -0.01
SRRM4-201ENST00000267260 SKOR2Q2VWA4 1001 aaPredicted RBP14.98□□□□□ -0.01
SRRM4-201ENST00000267260 MORC1Q86VD1 984 aa14.98□□□□□ -0.01
SRRM4-201ENST00000267260 SENP3Q9H4L4 574 aaPredicted RBP14.98□□□□□ -0.01
SRRM4-201ENST00000267260 KAT6BQ8WYB5 2073 aa14.98□□□□□ -0.01
SRRM4-201ENST00000267260 SENP3-EIF4A1A0A087X0R7 540 aa14.97□□□□□ -0.01
SRRM4-201ENST00000267260 MAP7D2Q96T17 732 aa14.97□□□□□ -0.01
SRRM4-201ENST00000267260 CWC15Q9P013 229 aaKnown RBP14.97□□□□□ -0.01
SRRM4-201ENST00000267260 RB1CC1Q8TDY2 1594 aa14.97□□□□□ -0.01
SRRM4-201ENST00000267260 CDR1P51861 262 aa14.97□□□□□ -0.01
SRRM4-201ENST00000267260 GORABQ5T7V8 394 aa14.97□□□□□ -0.01
SRRM4-201ENST00000267260 AK7Q96M32 723 aa14.97□□□□□ -0.01
SRRM4-201ENST00000267260 TIMELESSQ9UNS1 1208 aa14.97□□□□□ -0.01
SRRM4-201ENST00000267260 KCNH8Q96L42 1107 aa14.96□□□□□ -0.01
SRRM4-201ENST00000267260 CCDC191Q8NCU4 936 aa14.96□□□□□ -0.01
SRRM4-201ENST00000267260 EIF3AQ14152 1382 aaKnown RBP14.96□□□□□ -0.02
SRRM4-201ENST00000267260 TRIM6-TRIM34B2RNG4 842 aa14.95□□□□□ -0.02
SRRM4-201ENST00000267260 RCAN3Q9UKA8 241 aa14.95□□□□□ -0.02
SRRM4-201ENST00000267260 PHLDB1Q86UU1 1377 aa14.95□□□□□ -0.02
SRRM4-201ENST00000267260 ITPRIPQ8IWB1 547 aa14.95□□□□□ -0.02
SRRM4-201ENST00000267260 ACBD3Q9H3P7 528 aa14.95□□□□□ -0.02
SRRM4-201ENST00000267260 RDXP35241 583 aaKnown RBP14.95□□□□□ -0.02
SRRM4-201ENST00000267260 KIF27Q86VH2 1401 aa14.95□□□□□ -0.02
SRRM4-201ENST00000267260 MTERF4Q7Z6M4 381 aaKnown RBP14.95□□□□□ -0.02
SRRM4-201ENST00000267260 SF3A1Q15459 793 aaKnown RBP14.94□□□□□ -0.02
SRRM4-201ENST00000267260 TAF7LQ5H9L4 462 aa14.94□□□□□ -0.02
SRRM4-201ENST00000267260 SRPK2P78362 688 aaKnown RBP14.94□□□□□ -0.02
SRRM4-201ENST00000267260 PDZRN4Q6ZMN7 1036 aaPredicted RBP14.93□□□□□ -0.02
SRRM4-201ENST00000267260 RUFY1Q96T51 708 aa14.93□□□□□ -0.02
SRRM4-201ENST00000267260 HDGFL2Q7Z4V5 671 aaPredicted RBP14.92□□□□□ -0.02
SRRM4-201ENST00000267260 RALBP1Q15311 655 aa14.92□□□□□ -0.02
SRRM4-201ENST00000267260 PES1O00541 588 aaKnown RBP14.92□□□□□ -0.02
SRRM4-201ENST00000267260 DCTN1Q14203 1278 aa14.92□□□□□ -0.02
SRRM4-201ENST00000267260 ARGLU1Q9NWB6 273 aaPredicted RBP14.92□□□□□ -0.02
SRRM4-201ENST00000267260 HOOK1Q9UJC3 728 aaKnown RBP14.92□□□□□ -0.02
SRRM4-201ENST00000267260 IPO7O95373 1038 aaKnown RBP14.91□□□□□ -0.02
SRRM4-201ENST00000267260 H3BQV1 296 aa14.91□□□□□ -0.02
SRRM4-201ENST00000267260 IFFO2Q5TF58 517 aa14.91□□□□□ -0.02
SRRM4-201ENST00000267260 CCDC66A2RUB6 948 aa14.9□□□□□ -0.02
SRRM4-201ENST00000267260 GSE1Q14687 1217 aa14.9□□□□□ -0.02
SRRM4-201ENST00000267260 STK31Q9BXU1 1019 aa14.9□□□□□ -0.02
SRRM4-201ENST00000267260 ANKRD20A12PQ8NF67 263 aa14.9□□□□□ -0.02
SRRM4-201ENST00000267260 MFAP1P55081 439 aaKnown RBP14.89□□□□□ -0.03
SRRM4-201ENST00000267260 LRRFIP1Q32MZ4 808 aaKnown RBP14.89□□□□□ -0.03
SRRM4-201ENST00000267260 FAM13BQ9NYF5 915 aa14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms