RNA–Protein interactions for RNA: ENST00000266880.11

CHFR-201, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 2 BASIC

Gene CHFR, Length 11,133 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-201ENST00000266880 PPP1R15AO75807 674 aaPredicted RBP14.07□□□□□ -0.16
CHFR-201ENST00000266880 CC2D1BQ5T0F9 858 aaKnown RBP14.07□□□□□ -0.16
CHFR-201ENST00000266880 KIAA1211Q6ZU35 1233 aa14.07□□□□□ -0.16
CHFR-201ENST00000266880 MS4A1P11836 297 aa14.06□□□□□ -0.16
CHFR-201ENST00000266880 HSP90B1P14625 803 aaKnown RBP14.06□□□□□ -0.16
CHFR-201ENST00000266880 FOXD4L5Q5VV16 416 aaPredicted RBP14.05□□□□□ -0.16
CHFR-201ENST00000266880 FOXD4L4Q8WXT5 416 aaPredicted RBP14.05□□□□□ -0.16
CHFR-201ENST00000266880 TPM3P06753 285 aa14.03□□□□□ -0.16
CHFR-201ENST00000266880 RGL3Q3MIN7 710 aa14.02□□□□□ -0.16
CHFR-201ENST00000266880 NOL8Q76FK4 1167 aaKnown RBP14.01□□□□□ -0.17
CHFR-201ENST00000266880 U2SURPO15042 1029 aaKnown RBP14.01□□□□□ -0.17
CHFR-201ENST00000266880 MFAP1P55081 439 aaKnown RBP14.01□□□□□ -0.17
CHFR-201ENST00000266880 HTATSF1O43719 755 aaKnown RBP14□□□□□ -0.17
CHFR-201ENST00000266880 FAM13BQ9NYF5 915 aa14□□□□□ -0.17
CHFR-201ENST00000266880 PHF14O94880 888 aa13.99□□□□□ -0.17
CHFR-201ENST00000266880 IPO9Q96P70 1041 aaKnown RBP13.99□□□□□ -0.17
CHFR-201ENST00000266880 CALD1Q05682 793 aaKnown RBP13.99□□□□□ -0.17
CHFR-201ENST00000266880 TSHZ2Q9NRE2 1034 aa13.99□□□□□ -0.17
CHFR-201ENST00000266880 RRP12Q5JTH9 1297 aaKnown RBP13.99□□□□□ -0.17
CHFR-201ENST00000266880 ZNF592Q92610 1267 aa13.99□□□□□ -0.17
CHFR-201ENST00000266880 NUDCQ9Y266 331 aa13.96□□□□□ -0.17
CHFR-201ENST00000266880 MTUS2Q5JR59 1369 aa13.96□□□□□ -0.17
CHFR-201ENST00000266880 CDCA8Q53HL2 280 aa13.96□□□□□ -0.18
CHFR-201ENST00000266880 TEX35Q5T0J7 233 aa13.95□□□□□ -0.18
CHFR-201ENST00000266880 RASSF8Q8NHQ8 419 aa13.95□□□□□ -0.18
CHFR-201ENST00000266880 TSPY4P0CV99 314 aa13.94□□□□□ -0.18
CHFR-201ENST00000266880 TSPY10P0CW01 314 aa13.94□□□□□ -0.18
CHFR-201ENST00000266880 CARD11Q9BXL7 1154 aa13.94□□□□□ -0.18
CHFR-201ENST00000266880 CSPP1Q1MSJ5 1256 aa13.94□□□□□ -0.18
CHFR-201ENST00000266880 GPS2Q13227 327 aa13.93□□□□□ -0.18
CHFR-201ENST00000266880 PES1O00541 588 aaKnown RBP13.93□□□□□ -0.18
CHFR-201ENST00000266880 ITPRIPQ8IWB1 547 aa13.93□□□□□ -0.18
CHFR-201ENST00000266880 CEP89Q96ST8 783 aa13.92□□□□□ -0.18
CHFR-201ENST00000266880 CFAP44Q96MT7 982 aa13.92□□□□□ -0.18
CHFR-201ENST00000266880 TCERG1O14776 1098 aaKnown RBP13.92□□□□□ -0.18
CHFR-201ENST00000266880 LMOD2Q6P5Q4 547 aa13.92□□□□□ -0.18
CHFR-201ENST00000266880 DDX11L8A8MPP1 907 aa13.92□□□□□ -0.18
CHFR-201ENST00000266880 PAXIP1Q6ZW49 1069 aaPredicted RBP13.91□□□□□ -0.18
CHFR-201ENST00000266880 NOM1Q5C9Z4 860 aaKnown RBP13.91□□□□□ -0.18
CHFR-201ENST00000266880 BCL11BQ9C0K0 894 aaPredicted RBP13.9□□□□□ -0.18
CHFR-201ENST00000266880 CCDC70Q6NSX1 233 aa13.9□□□□□ -0.18
CHFR-201ENST00000266880 MEX3CQ5U5Q3 659 aaKnown RBP13.9□□□□□ -0.18
CHFR-201ENST00000266880 CCDC34Q96HJ3 373 aa13.88□□□□□ -0.19
CHFR-201ENST00000266880 TRIM6-TRIM34B2RNG4 842 aa13.88□□□□□ -0.19
CHFR-201ENST00000266880 STK11IPQ8N1F8 1099 aa13.87□□□□□ -0.19
CHFR-201ENST00000266880 FOXD4L6Q3SYB3 417 aaPredicted RBP13.87□□□□□ -0.19
CHFR-201ENST00000266880 FOXD4L3Q6VB84 417 aaPredicted RBP13.87□□□□□ -0.19
CHFR-201ENST00000266880 TPD52L1Q16890 204 aaPredicted RBP13.87□□□□□ -0.19
CHFR-201ENST00000266880 MAP7D2Q96T17 732 aa13.87□□□□□ -0.19
CHFR-201ENST00000266880 RWDD1Q9H446 243 aaPredicted RBP13.87□□□□□ -0.19
CHFR-201ENST00000266880 RCAN3Q9UKA8 241 aa13.87□□□□□ -0.19
CHFR-201ENST00000266880 CLIP1P30622 1438 aa13.86□□□□□ -0.19
CHFR-201ENST00000266880 TSR1Q2NL82 804 aaKnown RBP13.85□□□□□ -0.19
CHFR-201ENST00000266880 NPM1P06748 294 aaKnown RBP eCLIP13.85□□□□□ -0.19
CHFR-201ENST00000266880 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.85□□□□□ -0.19
CHFR-201ENST00000266880 GPATCH3Q96I76 525 aa13.85□□□□□ -0.19
CHFR-201ENST00000266880 POGKQ9P215 609 aa13.85□□□□□ -0.19
CHFR-201ENST00000266880 MAPK8IP2Q13387 824 aaPredicted RBP13.84□□□□□ -0.19
CHFR-201ENST00000266880 PLCD4Q9BRC7 762 aa13.84□□□□□ -0.19
CHFR-201ENST00000266880 KIF16BQ96L93 1317 aa13.84□□□□□ -0.19
CHFR-201ENST00000266880 GSE1Q14687 1217 aa13.84□□□□□ -0.19
CHFR-201ENST00000266880 VPS53Q5VIR6 699 aa13.84□□□□□ -0.19
CHFR-201ENST00000266880 WWC1Q8IX03 1113 aa13.84□□□□□ -0.19
CHFR-201ENST00000266880 SOX12O15370 315 aa13.84□□□□□ -0.19
CHFR-201ENST00000266880 SLC4A3P48751 1232 aa13.84□□□□□ -0.19
CHFR-201ENST00000266880 HMGB1P09429 215 aaKnown RBP13.83□□□□□ -0.2
CHFR-201ENST00000266880 GOLGA6L19H0YKK7 550 aa13.83□□□□□ -0.2
CHFR-201ENST00000266880 SF3A1Q15459 793 aaKnown RBP13.83□□□□□ -0.2
CHFR-201ENST00000266880 IPO8O15397 1037 aaKnown RBP13.82□□□□□ -0.2
CHFR-201ENST00000266880 AK7Q96M32 723 aa13.82□□□□□ -0.2
CHFR-201ENST00000266880 TPM1P09493 284 aa13.82□□□□□ -0.2
CHFR-201ENST00000266880 SIN3AQ96ST3 1273 aa13.81□□□□□ -0.2
CHFR-201ENST00000266880 FBXW7Q969H0 707 aa13.8□□□□□ -0.2
CHFR-201ENST00000266880 HSP90AB3PQ58FF7 597 aa13.8□□□□□ -0.2
CHFR-201ENST00000266880 H3BQV1 296 aa13.79□□□□□ -0.2
CHFR-201ENST00000266880 ST18O60284 1047 aa13.79□□□□□ -0.2
CHFR-201ENST00000266880 IFFO2Q5TF58 517 aa13.79□□□□□ -0.2
CHFR-201ENST00000266880 HOMER1Q86YM7 354 aa13.79□□□□□ -0.2
CHFR-201ENST00000266880 RDXP35241 583 aaKnown RBP13.79□□□□□ -0.2
CHFR-201ENST00000266880 MORC1Q86VD1 984 aa13.79□□□□□ -0.2
CHFR-201ENST00000266880 RUFY1Q96T51 708 aa13.79□□□□□ -0.2
CHFR-201ENST00000266880 DDX49Q9Y6V7 483 aaKnown RBP13.79□□□□□ -0.2
CHFR-201ENST00000266880 BECN2A8MW95 431 aa13.79□□□□□ -0.2
CHFR-201ENST00000266880 CCDC191Q8NCU4 936 aa13.78□□□□□ -0.2
CHFR-201ENST00000266880 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.78□□□□□ -0.2
CHFR-201ENST00000266880 ZCCHC6Q5VYS8 1495 aaKnown RBP13.78□□□□□ -0.2
CHFR-201ENST00000266880 MYO15BQ96JP2 1530 aa13.78□□□□□ -0.2
CHFR-201ENST00000266880 CCDC9Q9Y3X0 531 aaKnown RBP13.78□□□□□ -0.2
CHFR-201ENST00000266880 CWC15Q9P013 229 aaKnown RBP13.77□□□□□ -0.2
CHFR-201ENST00000266880 CHMP3Q9Y3E7 222 aa13.77□□□□□ -0.21
CHFR-201ENST00000266880 PCMTD1Q96MG8 357 aaPredicted RBP13.77□□□□□ -0.21
CHFR-201ENST00000266880 H0YHG0 523 aa13.77□□□□□ -0.21
CHFR-201ENST00000266880 FAM43AQ8N2R8 423 aa13.76□□□□□ -0.21
CHFR-201ENST00000266880 GORABQ5T7V8 394 aa13.76□□□□□ -0.21
CHFR-201ENST00000266880 RTF1Q92541 710 aaKnown RBP13.76□□□□□ -0.21
CHFR-201ENST00000266880 TPM2P07951 284 aa13.76□□□□□ -0.21
CHFR-201ENST00000266880 CCER2I3L3R5 266 aa13.76□□□□□ -0.21
CHFR-201ENST00000266880 MARCH6O60337 910 aa13.76□□□□□ -0.21
CHFR-201ENST00000266880 PMFBP1Q8TBY8 1022 aa13.76□□□□□ -0.21
CHFR-201ENST00000266880 KTN1Q86UP2 1357 aaKnown RBP13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms