RNA–Protein interactions for RNA: ENST00000266742.8

NEDD1-201, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene NEDD1, Length 4,046 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-201ENST00000266742 ABCC5O15440 1437 aa11.35□□□□□ -0.59
NEDD1-201ENST00000266742 WASHC2AQ641Q2 1341 aa11.35□□□□□ -0.59
NEDD1-201ENST00000266742 TSHZ2Q9NRE2 1034 aa11.34□□□□□ -0.59
NEDD1-201ENST00000266742 DISP1Q96F81 1524 aa11.34□□□□□ -0.59
NEDD1-201ENST00000266742 TROQ12816 1431 aaPredicted RBP11.34□□□□□ -0.59
NEDD1-201ENST00000266742 NUP153P49790 1475 aaKnown RBP11.34□□□□□ -0.59
NEDD1-201ENST00000266742 RAPGEF6Q8TEU7 1601 aa11.34□□□□□ -0.59
NEDD1-201ENST00000266742 FBLN2P98095 1184 aa11.33□□□□□ -0.6
NEDD1-201ENST00000266742 ERCC6Q03468 1493 aa11.33□□□□□ -0.6
NEDD1-201ENST00000266742 ANKRD30BQ9BXX2 1392 aa11.33□□□□□ -0.6
NEDD1-201ENST00000266742 KDM5BQ9UGL1 1544 aa11.33□□□□□ -0.6
NEDD1-201ENST00000266742 RPRD2Q5VT52 1461 aaKnown RBP11.33□□□□□ -0.6
NEDD1-201ENST00000266742 MAGI1Q96QZ7 1491 aaPredicted RBP11.33□□□□□ -0.6
NEDD1-201ENST00000266742 FOXD1Q16676 465 aa11.32□□□□□ -0.6
NEDD1-201ENST00000266742 DNMT1P26358 1616 aaKnown RBP11.32□□□□□ -0.6
NEDD1-201ENST00000266742 ZNF777Q9ULD5 760 aaPredicted RBP11.32□□□□□ -0.6
NEDD1-201ENST00000266742 CNTLNQ9NXG0 1405 aa11.32□□□□□ -0.6
NEDD1-201ENST00000266742 PLEKHD1A6NEE1 506 aa11.31□□□□□ -0.6
NEDD1-201ENST00000266742 ZNF644Q9H582 1327 aaPredicted RBP11.31□□□□□ -0.6
NEDD1-201ENST00000266742 DENND4BO75064 1496 aaPredicted RBP11.31□□□□□ -0.6
NEDD1-201ENST00000266742 ANKRD30AQ9BXX3 1397 aa11.3□□□□□ -0.6
NEDD1-201ENST00000266742 CCDC7Q96M83 1385 aa11.29□□□□□ -0.6
NEDD1-201ENST00000266742 KDM6BO15054 1643 aa11.29□□□□□ -0.6
NEDD1-201ENST00000266742 JPH4Q96JJ6 628 aa11.29□□□□□ -0.6
NEDD1-201ENST00000266742 SYNJ2O15056 1496 aa11.29□□□□□ -0.6
NEDD1-201ENST00000266742 PRG4Q92954 1404 aaPredicted RBP11.28□□□□□ -0.6
NEDD1-201ENST00000266742 EIF4G3O43432 1585 aaKnown RBP11.28□□□□□ -0.6
NEDD1-201ENST00000266742 NCOA1Q15788 1441 aa11.28□□□□□ -0.6
NEDD1-201ENST00000266742 TSPY4P0CV99 314 aa11.27□□□□□ -0.6
NEDD1-201ENST00000266742 TSPY10P0CW01 314 aa11.27□□□□□ -0.6
NEDD1-201ENST00000266742 CAMSAP2Q08AD1 1489 aa11.27□□□□□ -0.6
NEDD1-201ENST00000266742 ITSN2Q9NZM3 1697 aa11.27□□□□□ -0.6
NEDD1-201ENST00000266742 ERICH6BQ5W0A0 696 aa11.27□□□□□ -0.61
NEDD1-201ENST00000266742 PRKRIP1Q9H875 184 aaPredicted RBP11.27□□□□□ -0.61
NEDD1-201ENST00000266742 MRS2Q9HD23 443 aa11.27□□□□□ -0.61
NEDD1-201ENST00000266742 NBPF8Q3BBV2 869 aa11.26□□□□□ -0.61
NEDD1-201ENST00000266742 GPATCH8Q9UKJ3 1502 aaKnown RBP11.26□□□□□ -0.61
NEDD1-201ENST00000266742 KIAA1107Q9UPP5 1409 aa11.25□□□□□ -0.61
NEDD1-201ENST00000266742 PLB1Q6P1J6 1458 aa11.25□□□□□ -0.61
NEDD1-201ENST00000266742 TEX14Q8IWB6 1497 aa11.24□□□□□ -0.61
NEDD1-201ENST00000266742 PKD2Q13563 968 aa11.24□□□□□ -0.61
NEDD1-201ENST00000266742 FAM9BQ8IZU0 186 aa11.24□□□□□ -0.61
NEDD1-201ENST00000266742 ADGRL2O95490 1459 aa11.23□□□□□ -0.61
NEDD1-201ENST00000266742 ANKRD50Q9ULJ7 1429 aa11.23□□□□□ -0.61
NEDD1-201ENST00000266742 ZNF326Q5BKZ1 582 aaKnown RBP11.23□□□□□ -0.61
NEDD1-201ENST00000266742 ARID4BQ4LE39 1312 aaPredicted RBP11.23□□□□□ -0.61
NEDD1-201ENST00000266742 KIF7Q2M1P5 1343 aa11.23□□□□□ -0.61
NEDD1-201ENST00000266742 NUP160Q12769 1436 aa11.22□□□□□ -0.61
NEDD1-201ENST00000266742 C11orf95C9JLR9 678 aaPredicted RBP11.21□□□□□ -0.61
NEDD1-201ENST00000266742 PZPP20742 1482 aa11.21□□□□□ -0.61
NEDD1-201ENST00000266742 POLR3GLQ9BT43 218 aa11.21□□□□□ -0.61
NEDD1-201ENST00000266742 CEP170Q5SW79 1584 aa11.21□□□□□ -0.62
NEDD1-201ENST00000266742 NUP155O75694 1391 aa11.21□□□□□ -0.62
NEDD1-201ENST00000266742 ADGBQ8N7X0 1667 aa11.21□□□□□ -0.62
NEDD1-201ENST00000266742 ADCY10Q96PN6 1610 aa11.2□□□□□ -0.62
NEDD1-201ENST00000266742 RSPH4AQ5TD94 716 aa11.2□□□□□ -0.62
NEDD1-201ENST00000266742 SPATA31E1Q6ZUB1 1445 aa11.2□□□□□ -0.62
NEDD1-201ENST00000266742 ZBED9Q6R2W3 1325 aa11.2□□□□□ -0.62
NEDD1-201ENST00000266742 ROCK2O75116 1388 aaKnown RBP11.19□□□□□ -0.62
NEDD1-201ENST00000266742 USP47Q96K76 1375 aa11.19□□□□□ -0.62
NEDD1-201ENST00000266742 KIF14Q15058 1648 aa11.19□□□□□ -0.62
NEDD1-201ENST00000266742 SHANK2Q9UPX8 1470 aa11.18□□□□□ -0.62
NEDD1-201ENST00000266742 PPP4R2Q9NY27 417 aa11.18□□□□□ -0.62
NEDD1-201ENST00000266742 C9orf84Q5VXU9 1444 aa11.18□□□□□ -0.62
NEDD1-201ENST00000266742 RBM19Q9Y4C8 960 aaKnown RBP11.18□□□□□ -0.62
NEDD1-201ENST00000266742 ANP32EQ9BTT0 268 aa11.17□□□□□ -0.62
NEDD1-201ENST00000266742 CARD11Q9BXL7 1154 aa11.17□□□□□ -0.62
NEDD1-201ENST00000266742 CCDC184Q52MB2 194 aa11.16□□□□□ -0.62
NEDD1-201ENST00000266742 PTPRGP23470 1445 aa11.16□□□□□ -0.62
NEDD1-201ENST00000266742 ATP10BO94823 1461 aa11.16□□□□□ -0.62
NEDD1-201ENST00000266742 IRX6P78412 446 aaPredicted RBP11.15□□□□□ -0.62
NEDD1-201ENST00000266742 KIF15Q9NS87 1388 aa11.14□□□□□ -0.63
NEDD1-201ENST00000266742 ABCA8O94911 1581 aa11.14□□□□□ -0.63
NEDD1-201ENST00000266742 CROCC2H7BZ55 1655 aa11.14□□□□□ -0.63
NEDD1-201ENST00000266742 MBD5Q9P267 1494 aa11.14□□□□□ -0.63
NEDD1-201ENST00000266742 HNRNPMP52272 730 aaKnown RBP eCLIP11.13□□□□□ -0.63
NEDD1-201ENST00000266742 TMC1Q8TDI8 760 aa11.13□□□□□ -0.63
NEDD1-201ENST00000266742 ABCC10Q5T3U5 1492 aa11.13□□□□□ -0.63
NEDD1-201ENST00000266742 UHRF1BP1Q6BDS2 1440 aa11.13□□□□□ -0.63
NEDD1-201ENST00000266742 KDM2AQ9Y2K7 1162 aa11.13□□□□□ -0.63
NEDD1-201ENST00000266742 ARHGEF12Q9NZN5 1544 aa11.12□□□□□ -0.63
NEDD1-201ENST00000266742 DCAF11Q8TEB1 546 aa11.12□□□□□ -0.63
NEDD1-201ENST00000266742 POLR1AO95602 1720 aaPredicted RBP11.12□□□□□ -0.63
NEDD1-201ENST00000266742 CNGB1Q14028 1251 aaPredicted RBP11.11□□□□□ -0.63
NEDD1-201ENST00000266742 RALGAPBQ86X10 1494 aa11.11□□□□□ -0.63
NEDD1-201ENST00000266742 KTN1Q86UP2 1357 aaKnown RBP11.11□□□□□ -0.63
NEDD1-201ENST00000266742 CCDC141Q6ZP82 1450 aa11.1□□□□□ -0.63
NEDD1-201ENST00000266742 KDM5DQ9BY66 1539 aa11.1□□□□□ -0.63
NEDD1-201ENST00000266742 ARHGEF5Q12774 1597 aa11.09□□□□□ -0.63
NEDD1-201ENST00000266742 RALBP1Q15311 655 aa11.09□□□□□ -0.63
NEDD1-201ENST00000266742 DHX29Q7Z478 1369 aaKnown RBP11.09□□□□□ -0.63
NEDD1-201ENST00000266742 ERICH6Q7L0X2 663 aa11.09□□□□□ -0.63
NEDD1-201ENST00000266742 CDC42BPAQ5VT25 1732 aa11.09□□□□□ -0.63
NEDD1-201ENST00000266742 ST20-MTHFSA0A0A6YYL1 179 aa11.08□□□□□ -0.64
NEDD1-201ENST00000266742 NUDCQ9Y266 331 aa11.08□□□□□ -0.64
NEDD1-201ENST00000266742 CCDC144AA2RUR9 1427 aa11.08□□□□□ -0.64
NEDD1-201ENST00000266742 SMG6Q86US8 1419 aaKnown RBP11.07□□□□□ -0.64
NEDD1-201ENST00000266742 KDM5CP41229 1560 aa11.07□□□□□ -0.64
NEDD1-201ENST00000266742 FANCIQ9NVI1 1328 aa11.06□□□□□ -0.64
NEDD1-201ENST00000266742 PLEKHH2Q8IVE3 1493 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms