RNA–Protein interactions for RNA: ENST00000266735.9

SNRPF-201, Transcript of small nuclear ribonucleoprotein polypeptide F, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRPF, Length 1,389 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPF-201ENST00000266735 PHF23Q9BUL5 403 aaPredicted RBP25.64■■□□□ 1.69
SNRPF-201ENST00000266735 ARHGAP5Q13017 1502 aa25.63■■□□□ 1.69
SNRPF-201ENST00000266735 MYO5CQ9NQX4 1742 aa25.62■■□□□ 1.69
SNRPF-201ENST00000266735 CFAP74Q9C0B2 1584 aa25.6■■□□□ 1.69
SNRPF-201ENST00000266735 PREX2Q70Z35 1606 aa25.6■■□□□ 1.69
SNRPF-201ENST00000266735 AKNAQ7Z591 1439 aa25.6■■□□□ 1.69
SNRPF-201ENST00000266735 CFDP1Q9UEE9 299 aaPredicted RBP25.59■■□□□ 1.69
SNRPF-201ENST00000266735 KDM6BO15054 1643 aa25.54■■□□□ 1.68
SNRPF-201ENST00000266735 CDC42BPAQ5VT25 1732 aa25.54■■□□□ 1.68
SNRPF-201ENST00000266735 COL17A1Q9UMD9 1497 aaPredicted RBP25.54■■□□□ 1.68
SNRPF-201ENST00000266735 ADGRL1O94910 1474 aa25.53■■□□□ 1.68
SNRPF-201ENST00000266735 CDC42BPBQ9Y5S2 1711 aa25.52■■□□□ 1.68
SNRPF-201ENST00000266735 MYOM3Q5VTT5 1437 aa25.52■■□□□ 1.68
SNRPF-201ENST00000266735 ZNF777Q9ULD5 760 aaPredicted RBP25.52■■□□□ 1.68
SNRPF-201ENST00000266735 ITSN2Q9NZM3 1697 aa25.52■■□□□ 1.68
SNRPF-201ENST00000266735 DENND4BO75064 1496 aaPredicted RBP25.5■■□□□ 1.67
SNRPF-201ENST00000266735 SCAPERQ9BY12 1400 aa25.5■■□□□ 1.67
SNRPF-201ENST00000266735 MIA2Q96PC5 1412 aa25.49■■□□□ 1.67
SNRPF-201ENST00000266735 PPARGC1BQ86YN6 1023 aaKnown RBP25.48■■□□□ 1.67
SNRPF-201ENST00000266735 PLEKHH2Q8IVE3 1493 aa25.47■■□□□ 1.67
SNRPF-201ENST00000266735 KIAA1107Q9UPP5 1409 aa25.45■■□□□ 1.67
SNRPF-201ENST00000266735 RAPGEF3O95398 923 aa25.45■■□□□ 1.67
SNRPF-201ENST00000266735 ABCC1P33527 1531 aa25.45■■□□□ 1.66
SNRPF-201ENST00000266735 SAMD9LQ8IVG5 1584 aa25.45■■□□□ 1.66
SNRPF-201ENST00000266735 ZNF644Q9H582 1327 aaPredicted RBP25.43■■□□□ 1.66
SNRPF-201ENST00000266735 POGZQ7Z3K3 1410 aa25.43■■□□□ 1.66
SNRPF-201ENST00000266735 ARHGEF12Q9NZN5 1544 aa25.41■■□□□ 1.66
SNRPF-201ENST00000266735 FGD6Q6ZV73 1430 aa25.4■■□□□ 1.66
SNRPF-201ENST00000266735 CAMSAP2Q08AD1 1489 aa25.4■■□□□ 1.66
SNRPF-201ENST00000266735 ZNF518AQ6AHZ1 1483 aa25.39■■□□□ 1.66
SNRPF-201ENST00000266735 SYCP2Q9BX26 1530 aa25.38■■□□□ 1.65
SNRPF-201ENST00000266735 HNRNPMP52272 730 aaKnown RBP eCLIP25.38■■□□□ 1.65
SNRPF-201ENST00000266735 TRAPPC8Q9Y2L5 1435 aa25.37■■□□□ 1.65
SNRPF-201ENST00000266735 FRMPD1Q5SYB0 1578 aa25.36■■□□□ 1.65
SNRPF-201ENST00000266735 AFAP1Q8N556 730 aa25.36■■□□□ 1.65
SNRPF-201ENST00000266735 MBD5Q9P267 1494 aa25.35■■□□□ 1.65
SNRPF-201ENST00000266735 RSPH4AQ5TD94 716 aa25.35■■□□□ 1.65
SNRPF-201ENST00000266735 TCOF1Q13428 1488 aaKnown RBP25.33■■□□□ 1.65
SNRPF-201ENST00000266735 RICTORQ6R327 1708 aa25.32■■□□□ 1.64
SNRPF-201ENST00000266735 ZMYM4Q5VZL5 1548 aa25.32■■□□□ 1.64
SNRPF-201ENST00000266735 MAGI2Q86UL8 1455 aa25.31■■□□□ 1.64
SNRPF-201ENST00000266735 KDM5CP41229 1560 aa25.31■■□□□ 1.64
SNRPF-201ENST00000266735 PTPN23Q9H3S7 1636 aa25.31■■□□□ 1.64
SNRPF-201ENST00000266735 CCDC141Q6ZP82 1450 aa25.29■■□□□ 1.64
SNRPF-201ENST00000266735 MLH3Q9UHC1 1453 aa25.27■■□□□ 1.64
SNRPF-201ENST00000266735 ARHGEF5Q12774 1597 aa25.27■■□□□ 1.64
SNRPF-201ENST00000266735 SPAG9O60271 1321 aaKnown RBP25.26■■□□□ 1.63
SNRPF-201ENST00000266735 FAM50AQ14320 339 aaKnown RBP25.26■■□□□ 1.63
SNRPF-201ENST00000266735 MYT1LQ9UL68 1186 aa25.25■■□□□ 1.63
SNRPF-201ENST00000266735 ZFYVE16Q7Z3T8 1539 aa25.23■■□□□ 1.63
SNRPF-201ENST00000266735 TSPY4P0CV99 314 aa25.23■■□□□ 1.63
SNRPF-201ENST00000266735 TSPY10P0CW01 314 aa25.23■■□□□ 1.63
SNRPF-201ENST00000266735 RRBP1Q9P2E9 1410 aaKnown RBP25.23■■□□□ 1.63
SNRPF-201ENST00000266735 HECW2Q9P2P5 1572 aa25.22■■□□□ 1.63
SNRPF-201ENST00000266735 YEATS2Q9ULM3 1422 aa25.22■■□□□ 1.63
SNRPF-201ENST00000266735 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP25.22■■□□□ 1.631e-6■■■■■ 38.1
SNRPF-201ENST00000266735 RTEL1-TNFRSF6BF6WH68 1400 aa25.21■■□□□ 1.63
SNRPF-201ENST00000266735 ABCC5O15440 1437 aa25.2■■□□□ 1.62
SNRPF-201ENST00000266735 ARHGEF40Q8TER5 1519 aa25.2■■□□□ 1.62
SNRPF-201ENST00000266735 DAPK1P53355 1430 aa25.18■■□□□ 1.62
SNRPF-201ENST00000266735 ATP7AQ04656 1500 aa25.17■■□□□ 1.62
SNRPF-201ENST00000266735 INO80Q9ULG1 1556 aaPredicted RBP25.15■■□□□ 1.62
SNRPF-201ENST00000266735 ATP10AO60312 1499 aa25.15■■□□□ 1.62
SNRPF-201ENST00000266735 SHANK2Q9UPX8 1470 aa25.15■■□□□ 1.62
SNRPF-201ENST00000266735 DNMT1P26358 1616 aaKnown RBP25.15■■□□□ 1.62
SNRPF-201ENST00000266735 C9orf84Q5VXU9 1444 aa25.15■■□□□ 1.62
SNRPF-201ENST00000266735 MAST1Q9Y2H9 1570 aa25.12■■□□□ 1.61
SNRPF-201ENST00000266735 KIDINS220Q9ULH0 1771 aa25.12■■□□□ 1.61
SNRPF-201ENST00000266735 DIP2CQ9Y2E4 1556 aa25.11■■□□□ 1.61
SNRPF-201ENST00000266735 ABCA6Q8N139 1617 aa25.09■■□□□ 1.61
SNRPF-201ENST00000266735 REREQ9P2R6 1566 aa25.06■■□□□ 1.6
SNRPF-201ENST00000266735 CROCC2H7BZ55 1655 aa25.06■■□□□ 1.6
SNRPF-201ENST00000266735 A2MP01023 1474 aa25.05■■□□□ 1.6
SNRPF-201ENST00000266735 ARID4BQ4LE39 1312 aaPredicted RBP25.05■■□□□ 1.6
SNRPF-201ENST00000266735 CHIC2Q9UKJ5 165 aa25.05■■□□□ 1.6
SNRPF-201ENST00000266735 ANKRD30AQ9BXX3 1397 aa25.04■■□□□ 1.6
SNRPF-201ENST00000266735 ITGAEP38570 1179 aa25.04■■□□□ 1.6
SNRPF-201ENST00000266735 PTPRKQ15262 1439 aa25.03■■□□□ 1.6
SNRPF-201ENST00000266735 ADGRL2O95490 1459 aa25.02■■□□□ 1.6
SNRPF-201ENST00000266735 DHX29Q7Z478 1369 aaKnown RBP25.02■■□□□ 1.6
SNRPF-201ENST00000266735 PLXNC1O60486 1568 aa25.02■■□□□ 1.6
SNRPF-201ENST00000266735 NCOA1Q15788 1441 aa25■■□□□ 1.59
SNRPF-201ENST00000266735 ROCK1Q13464 1354 aa25■■□□□ 1.59
SNRPF-201ENST00000266735 KIF15Q9NS87 1388 aa25■■□□□ 1.59
SNRPF-201ENST00000266735 AGLP35573 1532 aa24.99■■□□□ 1.59
SNRPF-201ENST00000266735 RRP7BPQ9NSQ0 103 aa24.99■■□□□ 1.59
SNRPF-201ENST00000266735 ADGBQ8N7X0 1667 aa24.98■■□□□ 1.59
SNRPF-201ENST00000266735 DUOX2Q9NRD8 1548 aa24.96■■□□□ 1.59
SNRPF-201ENST00000266735 SIGLEC1Q9BZZ2 1709 aa24.93■■□□□ 1.58
SNRPF-201ENST00000266735 ERBINQ96RT1 1412 aa24.91■■□□□ 1.58
SNRPF-201ENST00000266735 MLECQ14165 292 aa24.91■■□□□ 1.58
SNRPF-201ENST00000266735 KIF3BO15066 747 aa24.9■■□□□ 1.58
SNRPF-201ENST00000266735 ANKRD50Q9ULJ7 1429 aa24.87■■□□□ 1.57
SNRPF-201ENST00000266735 KDM4FA0A1W2PPD8 638 aa24.86■■□□□ 1.57
SNRPF-201ENST00000266735 BCORL1Q5H9F3 1711 aa24.86■■□□□ 1.57
SNRPF-201ENST00000266735 GGT6Q6P531 493 aa24.84■■□□□ 1.57
SNRPF-201ENST00000266735 EIF2AK4Q9P2K8 1649 aaKnown RBP24.84■■□□□ 1.57
SNRPF-201ENST00000266735 PPP6R1Q9UPN7 881 aa24.83■■□□□ 1.57
SNRPF-201ENST00000266735 HFM1A2PYH4 1435 aa24.81■■□□□ 1.56
SNRPF-201ENST00000266735 ADAMTSL3P82987 1691 aa24.8■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms