RNA–Protein interactions for RNA: ENST00000265361.7

SEMA3C-201, Transcript of semaphorin 3C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEMA3C, Length 5,174 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3C-201ENST00000265361 GOLGA6L4A6NEF3 574 aa22.6■■□□□ 1.21
SEMA3C-201ENST00000265361 CC2D1BQ5T0F9 858 aaKnown RBP22.6■■□□□ 1.21
SEMA3C-201ENST00000265361 B4GALNT3Q6L9W6 998 aa22.6■■□□□ 1.21
SEMA3C-201ENST00000265361 NAP1L5Q96NT1 182 aaPredicted RBP22.58■■□□□ 1.21
SEMA3C-201ENST00000265361 SETD5Q9C0A6 1442 aa22.58■■□□□ 1.21
SEMA3C-201ENST00000265361 DHX57Q6P158 1386 aaKnown RBP22.54■■□□□ 1.2
SEMA3C-201ENST00000265361 TMF1P82094 1093 aa22.52■■□□□ 1.2
SEMA3C-201ENST00000265361 SOX12O15370 315 aa22.51■■□□□ 1.19
SEMA3C-201ENST00000265361 HDGFP51858 240 aaKnown RBP22.51■■□□□ 1.19
SEMA3C-201ENST00000265361 HSCBQ8IWL3 235 aa22.48■■□□□ 1.19
SEMA3C-201ENST00000265361 SRPK2P78362 688 aaKnown RBP22.47■■□□□ 1.19
SEMA3C-201ENST00000265361 CADPSQ9ULU8 1353 aa22.47■■□□□ 1.19
SEMA3C-201ENST00000265361 SYNJ1O43426 1573 aa22.47■■□□□ 1.19
SEMA3C-201ENST00000265361 DCAF11Q8TEB1 546 aa22.47■■□□□ 1.19
SEMA3C-201ENST00000265361 MCCP23508 829 aa22.46■■□□□ 1.19
SEMA3C-201ENST00000265361 TDRD9Q8NDG6 1382 aaKnown RBP22.46■■□□□ 1.19
SEMA3C-201ENST00000265361 ARHGAP35Q9NRY4 1499 aa22.46■■□□□ 1.19
SEMA3C-201ENST00000265361 FHOD3Q2V2M9 1422 aa22.45■■□□□ 1.18
SEMA3C-201ENST00000265361 CLSTN1O94985 981 aa22.44■■□□□ 1.18
SEMA3C-201ENST00000265361 ISY1Q9ULR0 285 aaKnown RBP22.44■■□□□ 1.18
SEMA3C-201ENST00000265361 EIF4G1Q04637 1599 aaKnown RBP22.44■■□□□ 1.18
SEMA3C-201ENST00000265361 CHAF1AQ13111 956 aaPredicted RBP22.43■■□□□ 1.18
SEMA3C-201ENST00000265361 MORC1Q86VD1 984 aa22.43■■□□□ 1.18
SEMA3C-201ENST00000265361 KIF21BO75037 1637 aa22.43■■□□□ 1.18
SEMA3C-201ENST00000265361 MLECQ14165 292 aa22.42■■□□□ 1.18
SEMA3C-201ENST00000265361 NCBP3Q53F19 620 aaKnown RBP22.42■■□□□ 1.18
SEMA3C-201ENST00000265361 RTF1Q92541 710 aaKnown RBP22.42■■□□□ 1.18
SEMA3C-201ENST00000265361 CCER2I3L3R5 266 aa22.4■■□□□ 1.18
SEMA3C-201ENST00000265361 KANK1Q14678 1352 aa22.39■■□□□ 1.17
SEMA3C-201ENST00000265361 SAFB2Q14151 953 aaKnown RBP eCLIP22.39■■□□□ 1.17
SEMA3C-201ENST00000265361 CFAP44Q96MT7 982 aa22.39■■□□□ 1.17
SEMA3C-201ENST00000265361 TRHP20396 242 aaPredicted RBP22.37■■□□□ 1.17
SEMA3C-201ENST00000265361 TIMELESSQ9UNS1 1208 aa22.37■■□□□ 1.17
SEMA3C-201ENST00000265361 FOXD1Q16676 465 aa22.36■■□□□ 1.17
SEMA3C-201ENST00000265361 GNL2Q13823 731 aaKnown RBP22.35■■□□□ 1.17
SEMA3C-201ENST00000265361 DRC7Q8IY82 874 aa22.35■■□□□ 1.17
SEMA3C-201ENST00000265361 L1TD1Q5T7N2 865 aaKnown RBP22.34■■□□□ 1.17
SEMA3C-201ENST00000265361 MSNP26038 577 aaKnown RBP22.33■■□□□ 1.17
SEMA3C-201ENST00000265361 KIAA1211Q6ZU35 1233 aa22.33■■□□□ 1.17
SEMA3C-201ENST00000265361 APBB1O00213 710 aa22.32■■□□□ 1.16
SEMA3C-201ENST00000265361 IPO8O15397 1037 aaKnown RBP22.32■■□□□ 1.16
SEMA3C-201ENST00000265361 IGF1RP08069 1367 aa22.32■■□□□ 1.16
SEMA3C-201ENST00000265361 SPRYD3Q8NCJ5 442 aa22.31■■□□□ 1.16
SEMA3C-201ENST00000265361 HDGFL2Q7Z4V5 671 aaPredicted RBP22.29■■□□□ 1.16
SEMA3C-201ENST00000265361 FMN1Q68DA7 1419 aa22.28■■□□□ 1.16
SEMA3C-201ENST00000265361 STK26Q9P289 416 aa22.28■■□□□ 1.16
SEMA3C-201ENST00000265361 GGT6Q6P531 493 aa22.28■■□□□ 1.16
SEMA3C-201ENST00000265361 HSPA5P11021 654 aaKnown RBP22.27■■□□□ 1.16
SEMA3C-201ENST00000265361 ZBTB4Q9P1Z0 1013 aaPredicted RBP22.27■■□□□ 1.15
SEMA3C-201ENST00000265361 ZNF330Q9Y3S2 320 aaPredicted RBP22.26■■□□□ 1.15
SEMA3C-201ENST00000265361 ARAP1Q96P48 1450 aa22.26■■□□□ 1.15
SEMA3C-201ENST00000265361 CSB-PGBD3P0DP91 1061 aa22.24■■□□□ 1.15
SEMA3C-201ENST00000265361 PAK3O75914 559 aaPredicted RBP22.23■■□□□ 1.15
SEMA3C-201ENST00000265361 CALD1Q05682 793 aaKnown RBP22.23■■□□□ 1.15
SEMA3C-201ENST00000265361 FGD5Q6ZNL6 1462 aa22.22■■□□□ 1.15
SEMA3C-201ENST00000265361 U2AF1L5P0DN76 240 aaPredicted RBP22.22■■□□□ 1.15
SEMA3C-201ENST00000265361 U2AF1Q01081 240 aaKnown RBP eCLIP22.22■■□□□ 1.15
SEMA3C-201ENST00000265361 FANCD2Q9BXW9 1451 aa22.21■■□□□ 1.15
SEMA3C-201ENST00000265361 NCAPD3P42695 1498 aa22.21■■□□□ 1.15
SEMA3C-201ENST00000265361 KIAA2012Q0VF49 1180 aa22.21■■□□□ 1.15
SEMA3C-201ENST00000265361 CHMP4AQ9BY43 222 aa22.2■■□□□ 1.14
SEMA3C-201ENST00000265361 ERCC6Q03468 1493 aa22.2■■□□□ 1.14
SEMA3C-201ENST00000265361 GBP4Q96PP9 640 aa22.18■■□□□ 1.14
SEMA3C-201ENST00000265361 HTATSF1O43719 755 aaKnown RBP22.17■■□□□ 1.14
SEMA3C-201ENST00000265361 RWDD1Q9H446 243 aaPredicted RBP22.17■■□□□ 1.14
SEMA3C-201ENST00000265361 KTN1Q86UP2 1357 aaKnown RBP22.17■■□□□ 1.14
SEMA3C-201ENST00000265361 MPHOSPH9Q99550 1183 aa22.17■■□□□ 1.14
SEMA3C-201ENST00000265361 TMX4Q9H1E5 349 aaPredicted RBP22.17■■□□□ 1.14
SEMA3C-201ENST00000265361 GORABQ5T7V8 394 aa22.16■■□□□ 1.14
SEMA3C-201ENST00000265361 PHLDB1Q86UU1 1377 aa22.16■■□□□ 1.14
SEMA3C-201ENST00000265361 RAD54L2Q9Y4B4 1467 aa22.16■■□□□ 1.14
SEMA3C-201ENST00000265361 PKD2Q13563 968 aa22.16■■□□□ 1.14
SEMA3C-201ENST00000265361 ITPRIPQ8IWB1 547 aa22.16■■□□□ 1.14
SEMA3C-201ENST00000265361 PDS5BQ9NTI5 1447 aa22.15■■□□□ 1.14
SEMA3C-201ENST00000265361 STK31Q9BXU1 1019 aa22.14■■□□□ 1.13
SEMA3C-201ENST00000265361 PRXQ9BXM0 1461 aa22.14■■□□□ 1.13
SEMA3C-201ENST00000265361 PTMSP20962 102 aa22.11■■□□□ 1.13
SEMA3C-201ENST00000265361 TOP2BQ02880 1626 aa22.11■■□□□ 1.13
SEMA3C-201ENST00000265361 BICRAQ9NZM4 1560 aa22.11■■□□□ 1.13
SEMA3C-201ENST00000265361 ERICH3Q5RHP9 1530 aa22.11■■□□□ 1.13
SEMA3C-201ENST00000265361 HDAC5Q9UQL6 1122 aa22.1■■□□□ 1.13
SEMA3C-201ENST00000265361 CCDC34Q96HJ3 373 aa22.1■■□□□ 1.13
SEMA3C-201ENST00000265361 RCAN3Q9UKA8 241 aa22.1■■□□□ 1.13
SEMA3C-201ENST00000265361 L3MBTL2Q969R5 705 aa22.1■■□□□ 1.13
SEMA3C-201ENST00000265361 NOC3LQ8WTT2 800 aaKnown RBP22.09■■□□□ 1.13
SEMA3C-201ENST00000265361 FANCIQ9NVI1 1328 aa22.09■■□□□ 1.13
SEMA3C-201ENST00000265361 SPAG9O60271 1321 aaKnown RBP22.08■■□□□ 1.13
SEMA3C-201ENST00000265361 TAF7LQ5H9L4 462 aa22.08■■□□□ 1.13
SEMA3C-201ENST00000265361 IPO9Q96P70 1041 aaKnown RBP22.08■■□□□ 1.13
SEMA3C-201ENST00000265361 CHMP3Q9Y3E7 222 aa22.08■■□□□ 1.13
SEMA3C-201ENST00000265361 CUX1P39880 1505 aa22.08■■□□□ 1.13
SEMA3C-201ENST00000265361 SYAP1Q96A49 352 aaPredicted RBP22.08■■□□□ 1.12
SEMA3C-201ENST00000265361 SLKQ9H2G2 1235 aaPredicted RBP22.08■■□□□ 1.12
SEMA3C-201ENST00000265361 CFTRP13569 1480 aa22.07■■□□□ 1.12
SEMA3C-201ENST00000265361 GZF1Q9H116 711 aaPredicted RBP22.06■■□□□ 1.12
SEMA3C-201ENST00000265361 CCDC9Q9Y3X0 531 aaKnown RBP22.06■■□□□ 1.12
SEMA3C-201ENST00000265361 LRRC9Q6ZRR7 1453 aa22.05■■□□□ 1.12
SEMA3C-201ENST00000265361 GPATCH3Q96I76 525 aa22.05■■□□□ 1.12
SEMA3C-201ENST00000265361 HMMRO75330 724 aa22.05■■□□□ 1.12
SEMA3C-201ENST00000265361 RALBP1Q15311 655 aa22.05■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms