RNA–Protein interactions for RNA: ENST00000265245.9

LSG1-201, Transcript of large 60S subunit nuclear export GTPase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSG1, Length 3,572 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSG1-201ENST00000265245 KCNH8Q96L42 1107 aa14.54□□□□□ -0.08
LSG1-201ENST00000265245 MPHOSPH9Q99550 1183 aa14.54□□□□□ -0.08
LSG1-201ENST00000265245 DAPK1P53355 1430 aa14.54□□□□□ -0.08
LSG1-201ENST00000265245 CARMIL2Q6F5E8 1435 aa14.53□□□□□ -0.08
LSG1-201ENST00000265245 TROQ12816 1431 aaPredicted RBP14.51□□□□□ -0.09
LSG1-201ENST00000265245 CCER2I3L3R5 266 aa14.51□□□□□ -0.09
LSG1-201ENST00000265245 ABCC5O15440 1437 aa14.51□□□□□ -0.09
LSG1-201ENST00000265245 ZNF644Q9H582 1327 aaPredicted RBP14.5□□□□□ -0.09
LSG1-201ENST00000265245 DENND4BO75064 1496 aaPredicted RBP14.5□□□□□ -0.09
LSG1-201ENST00000265245 JPH4Q96JJ6 628 aa14.49□□□□□ -0.09
LSG1-201ENST00000265245 CFDP1Q9UEE9 299 aaPredicted RBP14.49□□□□□ -0.09
LSG1-201ENST00000265245 KDM6BO15054 1643 aa14.49□□□□□ -0.09
LSG1-201ENST00000265245 PRG4Q92954 1404 aaPredicted RBP14.49□□□□□ -0.09
LSG1-201ENST00000265245 KDM5BQ9UGL1 1544 aa14.49□□□□□ -0.09
LSG1-201ENST00000265245 DNMT1P26358 1616 aaKnown RBP14.48□□□□□ -0.09
LSG1-201ENST00000265245 PLB1Q6P1J6 1458 aa14.48□□□□□ -0.09
LSG1-201ENST00000265245 SUPT16HQ9Y5B9 1047 aaKnown RBP14.47□□□□□ -0.09
LSG1-201ENST00000265245 SLC4A1APQ9BWU0 796 aaKnown RBP14.45□□□□□ -0.1
LSG1-201ENST00000265245 EIF4G2P78344 907 aaKnown RBP eCLIP14.44□□□□□ -0.16e-6■■■■□ 25.1
LSG1-201ENST00000265245 FOXD1Q16676 465 aa14.44□□□□□ -0.1
LSG1-201ENST00000265245 L3MBTL2Q969R5 705 aa14.44□□□□□ -0.1
LSG1-201ENST00000265245 ERCC6L2Q5T890 1561 aa14.44□□□□□ -0.1
LSG1-201ENST00000265245 CAMSAP2Q08AD1 1489 aa14.43□□□□□ -0.1
LSG1-201ENST00000265245 HSPA5P11021 654 aaKnown RBP14.43□□□□□ -0.1
LSG1-201ENST00000265245 ZNF777Q9ULD5 760 aaPredicted RBP14.43□□□□□ -0.1
LSG1-201ENST00000265245 ANKRD30BQ9BXX2 1392 aa14.43□□□□□ -0.1
LSG1-201ENST00000265245 GPATCH8Q9UKJ3 1502 aaKnown RBP14.43□□□□□ -0.1
LSG1-201ENST00000265245 PLEKHD1A6NEE1 506 aa14.42□□□□□ -0.1
LSG1-201ENST00000265245 ITSN2Q9NZM3 1697 aa14.41□□□□□ -0.1
LSG1-201ENST00000265245 RPRD2Q5VT52 1461 aaKnown RBP14.41□□□□□ -0.1
LSG1-201ENST00000265245 NCOA1Q15788 1441 aa14.4□□□□□ -0.1
LSG1-201ENST00000265245 ABCA8O94911 1581 aa14.39□□□□□ -0.11
LSG1-201ENST00000265245 WASHC2AQ641Q2 1341 aa14.38□□□□□ -0.11
LSG1-201ENST00000265245 ANKRD30AQ9BXX3 1397 aa14.38□□□□□ -0.11
LSG1-201ENST00000265245 ADCY10Q96PN6 1610 aa14.38□□□□□ -0.11
LSG1-201ENST00000265245 KIF14Q15058 1648 aa14.37□□□□□ -0.11
LSG1-201ENST00000265245 ADGRL2O95490 1459 aa14.36□□□□□ -0.11
LSG1-201ENST00000265245 OSCARQ8IYS5 282 aa14.35□□□□□ -0.11
LSG1-201ENST00000265245 TEX14Q8IWB6 1497 aa14.34□□□□□ -0.11
LSG1-201ENST00000265245 RIMBP3CA6NJZ7 1639 aa14.34□□□□□ -0.11
LSG1-201ENST00000265245 RIMBP3BA6NNM3 1639 aa14.34□□□□□ -0.11
LSG1-201ENST00000265245 RIMBP3Q9UFD9 1639 aa14.34□□□□□ -0.11
LSG1-201ENST00000265245 ATP10BO94823 1461 aa14.34□□□□□ -0.11
LSG1-201ENST00000265245 PZPP20742 1482 aa14.34□□□□□ -0.11
LSG1-201ENST00000265245 ANKRD50Q9ULJ7 1429 aa14.32□□□□□ -0.12
LSG1-201ENST00000265245 UHRF1BP1LA0JNW5 1464 aa14.32□□□□□ -0.12
LSG1-201ENST00000265245 NBPF8Q3BBV2 869 aa14.32□□□□□ -0.12
LSG1-201ENST00000265245 ADGBQ8N7X0 1667 aa14.32□□□□□ -0.12
LSG1-201ENST00000265245 PTPRGP23470 1445 aa14.32□□□□□ -0.12
LSG1-201ENST00000265245 KIAA1107Q9UPP5 1409 aa14.32□□□□□ -0.12
LSG1-201ENST00000265245 NEFLP07196 543 aa14.32□□□□□ -0.12
LSG1-201ENST00000265245 TSPY4P0CV99 314 aa14.32□□□□□ -0.12
LSG1-201ENST00000265245 TSPY10P0CW01 314 aa14.32□□□□□ -0.12
LSG1-201ENST00000265245 ABCC10Q5T3U5 1492 aa14.31□□□□□ -0.12
LSG1-201ENST00000265245 CNTLNQ9NXG0 1405 aa14.31□□□□□ -0.12
LSG1-201ENST00000265245 PKD2Q13563 968 aa14.3□□□□□ -0.12
LSG1-201ENST00000265245 SHANK2Q9UPX8 1470 aa14.3□□□□□ -0.12
LSG1-201ENST00000265245 CCDC7Q96M83 1385 aa14.3□□□□□ -0.12
LSG1-201ENST00000265245 C9orf84Q5VXU9 1444 aa14.29□□□□□ -0.12
LSG1-201ENST00000265245 ERICH6Q7L0X2 663 aa14.29□□□□□ -0.12
LSG1-201ENST00000265245 FKBP8Q14318 412 aa14.29□□□□□ -0.12
LSG1-201ENST00000265245 CROCC2H7BZ55 1655 aa14.29□□□□□ -0.12
LSG1-201ENST00000265245 NUP155O75694 1391 aa14.27□□□□□ -0.13
LSG1-201ENST00000265245 ABCC2Q92887 1545 aa14.26□□□□□ -0.13
LSG1-201ENST00000265245 C11orf95C9JLR9 678 aaPredicted RBP14.26□□□□□ -0.13
LSG1-201ENST00000265245 HNRNPUQ00839 825 aaKnown RBP eCLIP14.26□□□□□ -0.13
LSG1-201ENST00000265245 CDC42BPAQ5VT25 1732 aa14.25□□□□□ -0.13
LSG1-201ENST00000265245 SPATA31E1Q6ZUB1 1445 aa14.25□□□□□ -0.13
LSG1-201ENST00000265245 HNRNPMP52272 730 aaKnown RBP eCLIP14.24□□□□□ -0.13
LSG1-201ENST00000265245 BCANQ96GW7 911 aa14.24□□□□□ -0.13
LSG1-201ENST00000265245 KIF15Q9NS87 1388 aa14.24□□□□□ -0.13
LSG1-201ENST00000265245 ZNF326Q5BKZ1 582 aaKnown RBP14.23□□□□□ -0.13
LSG1-201ENST00000265245 KIF7Q2M1P5 1343 aa14.23□□□□□ -0.13
LSG1-201ENST00000265245 RSPH4AQ5TD94 716 aa14.23□□□□□ -0.13
LSG1-201ENST00000265245 PRKRIP1Q9H875 184 aaPredicted RBP14.23□□□□□ -0.13
LSG1-201ENST00000265245 MBD5Q9P267 1494 aa14.22□□□□□ -0.13
LSG1-201ENST00000265245 ANO8Q9HCE9 1232 aaPredicted RBP14.21□□□□□ -0.13
LSG1-201ENST00000265245 ARHGEF5Q12774 1597 aa14.2□□□□□ -0.14
LSG1-201ENST00000265245 ZCCHC11Q5TAX3 1644 aaKnown RBP14.2□□□□□ -0.14
LSG1-201ENST00000265245 CCDC141Q6ZP82 1450 aa14.2□□□□□ -0.14
LSG1-201ENST00000265245 USP47Q96K76 1375 aa14.2□□□□□ -0.14
LSG1-201ENST00000265245 KDM5DQ9BY66 1539 aa14.18□□□□□ -0.14
LSG1-201ENST00000265245 ANP32EQ9BTT0 268 aa14.18□□□□□ -0.14
LSG1-201ENST00000265245 MRS2Q9HD23 443 aa14.18□□□□□ -0.14
LSG1-201ENST00000265245 CCDC136Q96JN2 1154 aa14.17□□□□□ -0.14
LSG1-201ENST00000265245 UHRF1BP1Q6BDS2 1440 aa14.16□□□□□ -0.14
LSG1-201ENST00000265245 ARID4BQ4LE39 1312 aaPredicted RBP14.15□□□□□ -0.14
LSG1-201ENST00000265245 ARHGEF12Q9NZN5 1544 aa14.15□□□□□ -0.14
LSG1-201ENST00000265245 PREX2Q70Z35 1606 aa14.15□□□□□ -0.14
LSG1-201ENST00000265245 TSHZ2Q9NRE2 1034 aa14.15□□□□□ -0.14
LSG1-201ENST00000265245 SAMD9LQ8IVG5 1584 aa14.15□□□□□ -0.14
LSG1-201ENST00000265245 CCDC184Q52MB2 194 aa14.14□□□□□ -0.15
LSG1-201ENST00000265245 POLR3GLQ9BT43 218 aa14.14□□□□□ -0.15
LSG1-201ENST00000265245 FAM9BQ8IZU0 186 aa14.14□□□□□ -0.15
LSG1-201ENST00000265245 CARD11Q9BXL7 1154 aa14.14□□□□□ -0.15
LSG1-201ENST00000265245 RALGAPBQ86X10 1494 aa14.13□□□□□ -0.15
LSG1-201ENST00000265245 ARHGAP5Q13017 1502 aa14.13□□□□□ -0.15
LSG1-201ENST00000265245 KDM2AQ9Y2K7 1162 aa14.12□□□□□ -0.15
LSG1-201ENST00000265245 POLR1AO95602 1720 aaPredicted RBP14.11□□□□□ -0.15
LSG1-201ENST00000265245 DCAF11Q8TEB1 546 aa14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms