RNA–Protein interactions for RNA: ENST00000262795.5

SHANK3-201, Transcript of SH3 and multiple ankyrin repeat domains 3, humanhuman

APPRIS P5 TSL 5 BASIC

Gene SHANK3, Length 7,091 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK3-201ENST00000262795 PTMAP06454 111 aaKnown RBP20.43■□□□□ 0.86
SHANK3-201ENST00000262795 CCNB3Q8WWL7 1395 aa20.42■□□□□ 0.86
SHANK3-201ENST00000262795 CLIP1P30622 1438 aa20.41■□□□□ 0.86
SHANK3-201ENST00000262795 GORABQ5T7V8 394 aa20.41■□□□□ 0.86
SHANK3-201ENST00000262795 MORC1Q86VD1 984 aa20.41■□□□□ 0.86
SHANK3-201ENST00000262795 RAD21O60216 631 aa20.41■□□□□ 0.86
SHANK3-201ENST00000262795 RGS3P49796 1198 aa20.4■□□□□ 0.86
SHANK3-201ENST00000262795 HDGFL2Q7Z4V5 671 aaPredicted RBP20.39■□□□□ 0.86
SHANK3-201ENST00000262795 WWC1Q8IX03 1113 aa20.35■□□□□ 0.85
SHANK3-201ENST00000262795 NAP1L5Q96NT1 182 aaPredicted RBP20.35■□□□□ 0.85
SHANK3-201ENST00000262795 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.34■□□□□ 0.857e-7■■□□□ 12.8
SHANK3-201ENST00000262795 PNNQ9H307 717 aaKnown RBP20.34■□□□□ 0.85
SHANK3-201ENST00000262795 NGEFQ8N5V2 710 aa20.34■□□□□ 0.85
SHANK3-201ENST00000262795 CWC22Q9HCG8 908 aaKnown RBP20.34■□□□□ 0.85
SHANK3-201ENST00000262795 GOLGA6L22H0YM25 854 aa20.33■□□□□ 0.85
SHANK3-201ENST00000262795 BECN1Q14457 450 aa20.33■□□□□ 0.85
SHANK3-201ENST00000262795 FOXD1Q16676 465 aa20.33■□□□□ 0.85
SHANK3-201ENST00000262795 DNTTIP2Q5QJE6 756 aaKnown RBP20.33■□□□□ 0.85
SHANK3-201ENST00000262795 SAMD1Q6SPF0 538 aaPredicted RBP20.32■□□□□ 0.84
SHANK3-201ENST00000262795 SPRYD3Q8NCJ5 442 aa20.31■□□□□ 0.84
SHANK3-201ENST00000262795 KIF3BO15066 747 aa20.3■□□□□ 0.84
SHANK3-201ENST00000262795 ERICH6BQ5W0A0 696 aa20.3■□□□□ 0.84
SHANK3-201ENST00000262795 AMPHP49418 695 aa20.3■□□□□ 0.84
SHANK3-201ENST00000262795 TMF1P82094 1093 aa20.29■□□□□ 0.84
SHANK3-201ENST00000262795 SIN3AQ96ST3 1273 aa20.29■□□□□ 0.84
SHANK3-201ENST00000262795 TRIM44Q96DX7 344 aaPredicted RBP20.28■□□□□ 0.84
SHANK3-201ENST00000262795 HSP90AB1P08238 724 aaKnown RBP20.28■□□□□ 0.84
SHANK3-201ENST00000262795 FBXO3Q9UK99 471 aa20.28■□□□□ 0.84
SHANK3-201ENST00000262795 CNKSR2Q8WXI2 1034 aa20.27■□□□□ 0.83
SHANK3-201ENST00000262795 WASHC2CQ9Y4E1 1318 aa20.26■□□□□ 0.83
SHANK3-201ENST00000262795 TOMM22Q9NS69 142 aa20.26■□□□□ 0.83
SHANK3-201ENST00000262795 PIP4K2BP78356 416 aa20.25■□□□□ 0.83
SHANK3-201ENST00000262795 DCAF1Q9Y4B6 1507 aa20.24■□□□□ 0.83
SHANK3-201ENST00000262795 GOLGA6L4A6NEF3 574 aa20.23■□□□□ 0.83
SHANK3-201ENST00000262795 KIF27Q86VH2 1401 aa20.23■□□□□ 0.83
SHANK3-201ENST00000262795 SLC4A10Q6U841 1118 aa20.21■□□□□ 0.83
SHANK3-201ENST00000262795 HNRNPMP52272 730 aaKnown RBP eCLIP20.21■□□□□ 0.83
SHANK3-201ENST00000262795 CREBRFQ8IUR6 639 aa20.21■□□□□ 0.83
SHANK3-201ENST00000262795 CTDP1Q9Y5B0 961 aaPredicted RBP20.2■□□□□ 0.82
SHANK3-201ENST00000262795 NUTM2BA6NNL0 878 aaPredicted RBP20.2■□□□□ 0.82
SHANK3-201ENST00000262795 NUTM2EB1AL46 878 aaPredicted RBP20.2■□□□□ 0.82
SHANK3-201ENST00000262795 NUTM2AQ8IVF1 878 aaPredicted RBP20.2■□□□□ 0.82
SHANK3-201ENST00000262795 TRIM34Q9BYJ4 488 aa20.19■□□□□ 0.82
SHANK3-201ENST00000262795 MYO15BQ96JP2 1530 aa20.19■□□□□ 0.82
SHANK3-201ENST00000262795 DEKP35659 375 aaKnown RBP20.19■□□□□ 0.82
SHANK3-201ENST00000262795 U2AF1L5P0DN76 240 aaPredicted RBP20.18■□□□□ 0.82
SHANK3-201ENST00000262795 U2AF1Q01081 240 aaKnown RBP eCLIP20.18■□□□□ 0.82
SHANK3-201ENST00000262795 CECR2Q9BXF3 1484 aa20.17■□□□□ 0.82
SHANK3-201ENST00000262795 HSP90B1P14625 803 aaKnown RBP20.17■□□□□ 0.82
SHANK3-201ENST00000262795 SUPT16HQ9Y5B9 1047 aaKnown RBP20.17■□□□□ 0.82
SHANK3-201ENST00000262795 SF3B2Q13435 895 aaKnown RBP20.17■□□□□ 0.82
SHANK3-201ENST00000262795 B4GALNT3Q6L9W6 998 aa20.16■□□□□ 0.82
SHANK3-201ENST00000262795 MARCH6O60337 910 aa20.16■□□□□ 0.82
SHANK3-201ENST00000262795 RASSF8Q8NHQ8 419 aa20.14■□□□□ 0.82
SHANK3-201ENST00000262795 USP35Q9P2H5 1018 aa20.14■□□□□ 0.82
SHANK3-201ENST00000262795 CUX2O14529 1486 aa20.13■□□□□ 0.81
SHANK3-201ENST00000262795 FAM69CQ0P6D2 419 aa20.13■□□□□ 0.81
SHANK3-201ENST00000262795 SPAG9O60271 1321 aaKnown RBP20.13■□□□□ 0.81
SHANK3-201ENST00000262795 ARID3AQ99856 593 aa20.12■□□□□ 0.81
SHANK3-201ENST00000262795 KIAA1211Q6ZU35 1233 aa20.12■□□□□ 0.81
SHANK3-201ENST00000262795 WRNQ14191 1432 aaPredicted RBP eCLIP20.12■□□□□ 0.81
SHANK3-201ENST00000262795 GOLGA6L6A8MZA4 724 aa20.12■□□□□ 0.81
SHANK3-201ENST00000262795 PKD2Q13563 968 aa20.11■□□□□ 0.81
SHANK3-201ENST00000262795 CARMIL2Q6F5E8 1435 aa20.11■□□□□ 0.81
SHANK3-201ENST00000262795 EFCAB2Q5VUJ9 269 aa20.11■□□□□ 0.81
SHANK3-201ENST00000262795 DRC7Q8IY82 874 aa20.11■□□□□ 0.81
SHANK3-201ENST00000262795 PSME1Q06323 249 aa20.09■□□□□ 0.81
SHANK3-201ENST00000262795 TDRD9Q8NDG6 1382 aaKnown RBP20.09■□□□□ 0.81
SHANK3-201ENST00000262795 DDRGK1Q96HY6 314 aa20.09■□□□□ 0.81
SHANK3-201ENST00000262795 NOP58Q9Y2X3 529 aaKnown RBP20.09■□□□□ 0.81
SHANK3-201ENST00000262795 MCCP23508 829 aa20.08■□□□□ 0.81
SHANK3-201ENST00000262795 TCEAL9Q9UHQ7 104 aa20.08■□□□□ 0.81
SHANK3-201ENST00000262795 GOLGA3Q08378 1498 aa20.08■□□□□ 0.8
SHANK3-201ENST00000262795 TRAK1Q9UPV9 953 aa20.08■□□□□ 0.8
SHANK3-201ENST00000262795 STK31Q9BXU1 1019 aa20.08■□□□□ 0.8
SHANK3-201ENST00000262795 TRIM6-TRIM34B2RNG4 842 aa20.07■□□□□ 0.8
SHANK3-201ENST00000262795 C1orf141Q5JVX7 400 aa20.07■□□□□ 0.8
SHANK3-201ENST00000262795 ITPRIPQ8IWB1 547 aa20.07■□□□□ 0.8
SHANK3-201ENST00000262795 ATF3P18847 181 aa20.06■□□□□ 0.8
SHANK3-201ENST00000262795 NECTIN2Q92692 538 aa20.06■□□□□ 0.8
SHANK3-201ENST00000262795 NOL8Q76FK4 1167 aaKnown RBP20.06■□□□□ 0.8
SHANK3-201ENST00000262795 CHMP4BQ9H444 224 aaKnown RBP20.06■□□□□ 0.8
SHANK3-201ENST00000262795 OSCARQ8IYS5 282 aa20.06■□□□□ 0.8
SHANK3-201ENST00000262795 NUTM2GQ5VZR2 741 aa20.05■□□□□ 0.8
SHANK3-201ENST00000262795 KIAA2012Q0VF49 1180 aa20.05■□□□□ 0.8
SHANK3-201ENST00000262795 NOC3LQ8WTT2 800 aaKnown RBP20.05■□□□□ 0.8
SHANK3-201ENST00000262795 CARMIL1Q5VZK9 1371 aa20.02■□□□□ 0.8
SHANK3-201ENST00000262795 ROCK2O75116 1388 aaKnown RBP20.02■□□□□ 0.79
SHANK3-201ENST00000262795 CCDC146Q8IYE0 955 aa20.01■□□□□ 0.79
SHANK3-201ENST00000262795 FAM177BA6PVY3 158 aa20.01■□□□□ 0.79
SHANK3-201ENST00000262795 VPS37DQ86XT2 251 aa20■□□□□ 0.79
SHANK3-201ENST00000262795 CEP162Q5TB80 1403 aa19.99■□□□□ 0.79
SHANK3-201ENST00000262795 MS4A1P11836 297 aa19.99■□□□□ 0.79
SHANK3-201ENST00000262795 EIF2S2P20042 333 aaKnown RBP19.99■□□□□ 0.79
SHANK3-201ENST00000262795 L1TD1Q5T7N2 865 aaKnown RBP19.98■□□□□ 0.79
SHANK3-201ENST00000262795 NOL10Q9BSC4 688 aaKnown RBP19.98■□□□□ 0.79
SHANK3-201ENST00000262795 TTC5Q8N0Z6 440 aa19.97■□□□□ 0.79
SHANK3-201ENST00000262795 CCDC180Q9P1Z9 1646 aa19.97■□□□□ 0.79
SHANK3-201ENST00000262795 SLC4A3P48751 1232 aa19.97■□□□□ 0.79
SHANK3-201ENST00000262795 GPATCH3Q96I76 525 aa19.96■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms