RNA–Protein interactions for RNA: ENST00000261908.10

NEO1-201, Transcript of neogenin 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NEO1, Length 7,088 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEO1-201ENST00000261908 DCAF11Q8TEB1 546 aa20.68■□□□□ 0.9
NEO1-201ENST00000261908 PLEKHD1A6NEE1 506 aa20.68■□□□□ 0.9
NEO1-201ENST00000261908 CREBRFQ8IUR6 639 aa20.68■□□□□ 0.9
NEO1-201ENST00000261908 GBP4Q96PP9 640 aa20.68■□□□□ 0.9
NEO1-201ENST00000261908 MFAP1P55081 439 aaKnown RBP20.68■□□□□ 0.9
NEO1-201ENST00000261908 FOXD4L5Q5VV16 416 aaPredicted RBP20.68■□□□□ 0.9
NEO1-201ENST00000261908 FOXD4L4Q8WXT5 416 aaPredicted RBP20.68■□□□□ 0.9
NEO1-201ENST00000261908 HSP90B1P14625 803 aaKnown RBP20.66■□□□□ 0.9
NEO1-201ENST00000261908 KIAA1211Q6ZU35 1233 aa20.65■□□□□ 0.9
NEO1-201ENST00000261908 RSF1Q96T23 1441 aaPredicted RBP20.64■□□□□ 0.89
NEO1-201ENST00000261908 ITPRIPQ8IWB1 547 aa20.63■□□□□ 0.89
NEO1-201ENST00000261908 GOLGA6L3A6NEY3 463 aa20.63■□□□□ 0.89
NEO1-201ENST00000261908 SRPK2P78362 688 aaKnown RBP20.63■□□□□ 0.89
NEO1-201ENST00000261908 PRM3Q9NNZ6 103 aa20.62■□□□□ 0.89
NEO1-201ENST00000261908 A0A0U1RQG5 324 aaPredicted RBP20.61■□□□□ 0.89
NEO1-201ENST00000261908 MORC1Q86VD1 984 aa20.61■□□□□ 0.89
NEO1-201ENST00000261908 ZNF330Q9Y3S2 320 aaPredicted RBP20.61■□□□□ 0.89
NEO1-201ENST00000261908 TMF1P82094 1093 aa20.6■□□□□ 0.89
NEO1-201ENST00000261908 TSHZ2Q9NRE2 1034 aa20.6■□□□□ 0.89
NEO1-201ENST00000261908 RCAN3Q9UKA8 241 aa20.58■□□□□ 0.89
NEO1-201ENST00000261908 FOXD1Q16676 465 aa20.58■□□□□ 0.88
NEO1-201ENST00000261908 GOLGA3Q08378 1498 aa20.57■□□□□ 0.88
NEO1-201ENST00000261908 RTF1Q92541 710 aaKnown RBP20.56■□□□□ 0.88
NEO1-201ENST00000261908 STK26Q9P289 416 aa20.56■□□□□ 0.88
NEO1-201ENST00000261908 TRIM6-TRIM34B2RNG4 842 aa20.56■□□□□ 0.88
NEO1-201ENST00000261908 FOXD4L6Q3SYB3 417 aaPredicted RBP20.55■□□□□ 0.88
NEO1-201ENST00000261908 FOXD4L3Q6VB84 417 aaPredicted RBP20.55■□□□□ 0.88
NEO1-201ENST00000261908 HSPA5P11021 654 aaKnown RBP20.54■□□□□ 0.88
NEO1-201ENST00000261908 GOLGA6L1Q8N7Z2 621 aa20.54■□□□□ 0.88
NEO1-201ENST00000261908 HSP90AA2PQ14568 343 aaPredicted RBP20.53■□□□□ 0.88
NEO1-201ENST00000261908 SLC4A3P48751 1232 aa20.53■□□□□ 0.88
NEO1-201ENST00000261908 CALD1Q05682 793 aaKnown RBP20.52■□□□□ 0.88
NEO1-201ENST00000261908 IPO9Q96P70 1041 aaKnown RBP20.51■□□□□ 0.87
NEO1-201ENST00000261908 SYAP1Q96A49 352 aaPredicted RBP20.51■□□□□ 0.87
NEO1-201ENST00000261908 CHMP3Q9Y3E7 222 aa20.5■□□□□ 0.87
NEO1-201ENST00000261908 VSIG10Q8N0Z9 540 aa20.5■□□□□ 0.87
NEO1-201ENST00000261908 CLUAP1Q96AJ1 413 aa20.5■□□□□ 0.87
NEO1-201ENST00000261908 TIMELESSQ9UNS1 1208 aa20.49■□□□□ 0.87
NEO1-201ENST00000261908 CCDC146Q8IYE0 955 aa20.48■□□□□ 0.87
NEO1-201ENST00000261908 TPM4P67936 248 aa20.48■□□□□ 0.87
NEO1-201ENST00000261908 PATL2C9JE40 543 aaKnown RBP20.48■□□□□ 0.87
NEO1-201ENST00000261908 PTMSP20962 102 aa20.48■□□□□ 0.87
NEO1-201ENST00000261908 U2AF1L5P0DN76 240 aaPredicted RBP20.46■□□□□ 0.87
NEO1-201ENST00000261908 U2AF1Q01081 240 aaKnown RBP eCLIP20.46■□□□□ 0.87
NEO1-201ENST00000261908 RWDD1Q9H446 243 aaPredicted RBP20.46■□□□□ 0.87
NEO1-201ENST00000261908 TCERG1O14776 1098 aaKnown RBP20.46■□□□□ 0.87
NEO1-201ENST00000261908 PAK3O75914 559 aaPredicted RBP20.46■□□□□ 0.87
NEO1-201ENST00000261908 FBXO3Q9UK99 471 aa20.45■□□□□ 0.86
NEO1-201ENST00000261908 IPO8O15397 1037 aaKnown RBP20.45■□□□□ 0.86
NEO1-201ENST00000261908 CCAR2Q8N163 923 aaKnown RBP20.44■□□□□ 0.86
NEO1-201ENST00000261908 SLC4A10Q6U841 1118 aa20.44■□□□□ 0.86
NEO1-201ENST00000261908 RASSF8Q8NHQ8 419 aa20.43■□□□□ 0.86
NEO1-201ENST00000261908 CCER2I3L3R5 266 aa20.43■□□□□ 0.86
NEO1-201ENST00000261908 PES1O00541 588 aaKnown RBP20.43■□□□□ 0.86
NEO1-201ENST00000261908 CCDC9Q9Y3X0 531 aaKnown RBP20.42■□□□□ 0.86
NEO1-201ENST00000261908 KTN1Q86UP2 1357 aaKnown RBP20.42■□□□□ 0.86
NEO1-201ENST00000261908 BCL11BQ9C0K0 894 aaPredicted RBP20.41■□□□□ 0.86
NEO1-201ENST00000261908 CFAP44Q96MT7 982 aa20.41■□□□□ 0.86
NEO1-201ENST00000261908 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP20.41■□□□□ 0.86
NEO1-201ENST00000261908 SMC4Q9NTJ3 1288 aa20.41■□□□□ 0.86
NEO1-201ENST00000261908 GORABQ5T7V8 394 aa20.41■□□□□ 0.86
NEO1-201ENST00000261908 HTATSF1O43719 755 aaKnown RBP20.41■□□□□ 0.86
NEO1-201ENST00000261908 WWC1Q8IX03 1113 aa20.39■□□□□ 0.85
NEO1-201ENST00000261908 PMFBP1Q8TBY8 1022 aa20.38■□□□□ 0.85
NEO1-201ENST00000261908 ZNF592Q92610 1267 aa20.37■□□□□ 0.85
NEO1-201ENST00000261908 ZNF771Q7L3S4 317 aaPredicted RBP20.35■□□□□ 0.85
NEO1-201ENST00000261908 TAF7LQ5H9L4 462 aa20.34■□□□□ 0.85
NEO1-201ENST00000261908 CCNB3Q8WWL7 1395 aa20.34■□□□□ 0.85
NEO1-201ENST00000261908 TOMM22Q9NS69 142 aa20.33■□□□□ 0.84
NEO1-201ENST00000261908 PLIN1O60240 522 aa20.32■□□□□ 0.84
NEO1-201ENST00000261908 SF3A1Q15459 793 aaKnown RBP20.32■□□□□ 0.84
NEO1-201ENST00000261908 VPS53Q5VIR6 699 aa20.32■□□□□ 0.84
NEO1-201ENST00000261908 BAZ1BQ9UIG0 1483 aaKnown RBP20.32■□□□□ 0.84
NEO1-201ENST00000261908 TPM3P06753 285 aa20.31■□□□□ 0.84
NEO1-201ENST00000261908 ROCK2O75116 1388 aaKnown RBP20.31■□□□□ 0.84
NEO1-201ENST00000261908 GPATCH3Q96I76 525 aa20.3■□□□□ 0.84
NEO1-201ENST00000261908 CSB-PGBD3P0DP91 1061 aa20.3■□□□□ 0.84
NEO1-201ENST00000261908 CSPP1Q1MSJ5 1256 aa20.3■□□□□ 0.84
NEO1-201ENST00000261908 RILPL2Q969X0 211 aa20.29■□□□□ 0.84
NEO1-201ENST00000261908 HDGFL2Q7Z4V5 671 aaPredicted RBP20.29■□□□□ 0.84
NEO1-201ENST00000261908 PHF14O94880 888 aa20.29■□□□□ 0.84
NEO1-201ENST00000261908 DDX49Q9Y6V7 483 aaKnown RBP20.29■□□□□ 0.84
NEO1-201ENST00000261908 EIF4G1Q04637 1599 aaKnown RBP20.29■□□□□ 0.84
NEO1-201ENST00000261908 SETQ01105 290 aaPredicted RBP20.29■□□□□ 0.84
NEO1-201ENST00000261908 TPD52L1Q16890 204 aaPredicted RBP20.28■□□□□ 0.84
NEO1-201ENST00000261908 RRP7AQ9Y3A4 280 aaKnown RBP20.28■□□□□ 0.84
NEO1-201ENST00000261908 KIF16BQ96L93 1317 aa20.28■□□□□ 0.84
NEO1-201ENST00000261908 BCL2L13Q9BXK5 485 aa20.28■□□□□ 0.84
NEO1-201ENST00000261908 NUTM2DQ5VT03 806 aaPredicted RBP20.28■□□□□ 0.84
NEO1-201ENST00000261908 RSPH6AQ9H0K4 717 aa20.27■□□□□ 0.84
NEO1-201ENST00000261908 PKD2Q13563 968 aa20.26■□□□□ 0.83
NEO1-201ENST00000261908 CEP89Q96ST8 783 aa20.26■□□□□ 0.83
NEO1-201ENST00000261908 FAM13BQ9NYF5 915 aa20.26■□□□□ 0.83
NEO1-201ENST00000261908 GGT6Q6P531 493 aa20.26■□□□□ 0.83
NEO1-201ENST00000261908 ERCC6Q03468 1493 aa20.26■□□□□ 0.83
NEO1-201ENST00000261908 H3BQV1 296 aa20.26■□□□□ 0.83
NEO1-201ENST00000261908 ST18O60284 1047 aa20.26■□□□□ 0.83
NEO1-201ENST00000261908 IFFO2Q5TF58 517 aa20.26■□□□□ 0.83
NEO1-201ENST00000261908 STK31Q9BXU1 1019 aa20.25■□□□□ 0.83
NEO1-201ENST00000261908 GSE1Q14687 1217 aa20.25■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms