RNA–Protein interactions for RNA: ENST00000261866.11

SPG11-201, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SPG11, Length 7,774 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-201ENST00000261866 ABCC8Q09428 1581 aa15.7■□□□□ 0.1
SPG11-201ENST00000261866 HDGFP51858 240 aaKnown RBP15.7■□□□□ 0.1
SPG11-201ENST00000261866 HNRNPMP52272 730 aaKnown RBP eCLIP15.7■□□□□ 0.1
SPG11-201ENST00000261866 RTF1Q92541 710 aaKnown RBP15.7■□□□□ 0.1
SPG11-201ENST00000261866 KANK4Q5T7N3 995 aaPredicted RBP15.69■□□□□ 0.1
SPG11-201ENST00000261866 B4GALNT3Q6L9W6 998 aa15.69■□□□□ 0.1
SPG11-201ENST00000261866 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.68■□□□□ 0.1
SPG11-201ENST00000261866 GOLGA6L22H0YM25 854 aa15.67■□□□□ 0.1
SPG11-201ENST00000261866 LTV1Q96GA3 475 aaPredicted RBP15.67■□□□□ 0.1
SPG11-201ENST00000261866 DDRGK1Q96HY6 314 aa15.67■□□□□ 0.1
SPG11-201ENST00000261866 KIF3BO15066 747 aa15.66■□□□□ 0.1
SPG11-201ENST00000261866 HSPA5P11021 654 aaKnown RBP15.65■□□□□ 0.1
SPG11-201ENST00000261866 PDE4CQ08493 712 aa15.65■□□□□ 0.1
SPG11-201ENST00000261866 HSP90AB1P08238 724 aaKnown RBP15.64■□□□□ 0.09
SPG11-201ENST00000261866 HDGFL2Q7Z4V5 671 aaPredicted RBP15.64■□□□□ 0.09
SPG11-201ENST00000261866 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.62■□□□□ 0.09
SPG11-201ENST00000261866 CHMP3Q9Y3E7 222 aa15.62■□□□□ 0.09
SPG11-201ENST00000261866 BAZ1AQ9NRL2 1556 aaPredicted RBP15.62■□□□□ 0.09
SPG11-201ENST00000261866 U2AF1L5P0DN76 240 aaPredicted RBP15.61■□□□□ 0.09
SPG11-201ENST00000261866 U2AF1Q01081 240 aaKnown RBP eCLIP15.61■□□□□ 0.095e-6■■■□□ 15.5
SPG11-201ENST00000261866 ERICH6BQ5W0A0 696 aa15.61■□□□□ 0.09
SPG11-201ENST00000261866 PRM3Q9NNZ6 103 aa15.6■□□□□ 0.09
SPG11-201ENST00000261866 ROCK2O75116 1388 aaKnown RBP15.6■□□□□ 0.09
SPG11-201ENST00000261866 CYB5RLQ6IPT4 315 aa15.6■□□□□ 0.09
SPG11-201ENST00000261866 PNNQ9H307 717 aaKnown RBP15.59■□□□□ 0.09
SPG11-201ENST00000261866 FHAD1B1AJZ9 1412 aa15.59■□□□□ 0.09
SPG11-201ENST00000261866 NUP155O75694 1391 aa15.58■□□□□ 0.09
SPG11-201ENST00000261866 CCDC146Q8IYE0 955 aa15.58■□□□□ 0.08
SPG11-201ENST00000261866 ARHGAP35Q9NRY4 1499 aa15.58■□□□□ 0.08
SPG11-201ENST00000261866 ARID3AQ99856 593 aa15.57■□□□□ 0.08
SPG11-201ENST00000261866 CARMIL2Q6F5E8 1435 aa15.57■□□□□ 0.08
SPG11-201ENST00000261866 NGDNQ8NEJ9 315 aaKnown RBP15.56■□□□□ 0.08
SPG11-201ENST00000261866 WASHC2CQ9Y4E1 1318 aa15.56■□□□□ 0.08
SPG11-201ENST00000261866 CCDC88BA6NC98 1476 aa15.56■□□□□ 0.08
SPG11-201ENST00000261866 NAP1L5Q96NT1 182 aaPredicted RBP15.55■□□□□ 0.08
SPG11-201ENST00000261866 EFCAB2Q5VUJ9 269 aa15.54■□□□□ 0.08
SPG11-201ENST00000261866 ITPRIPQ8IWB1 547 aa15.54■□□□□ 0.08
SPG11-201ENST00000261866 MPHOSPH9Q99550 1183 aa15.54■□□□□ 0.08
SPG11-201ENST00000261866 TRAK1Q9UPV9 953 aa15.52■□□□□ 0.08
SPG11-201ENST00000261866 EID1Q9Y6B2 187 aa15.52■□□□□ 0.08
SPG11-201ENST00000261866 PDS5BQ9NTI5 1447 aa15.52■□□□□ 0.07
SPG11-201ENST00000261866 SLC4A10Q6U841 1118 aa15.51■□□□□ 0.07
SPG11-201ENST00000261866 MROH2BQ7Z745 1585 aa15.51■□□□□ 0.07
SPG11-201ENST00000261866 SETD5Q9C0A6 1442 aa15.51■□□□□ 0.07
SPG11-201ENST00000261866 PPP4R2Q9NY27 417 aa15.51■□□□□ 0.07
SPG11-201ENST00000261866 FBXO3Q9UK99 471 aa15.5■□□□□ 0.07
SPG11-201ENST00000261866 GNL2Q13823 731 aaKnown RBP15.49■□□□□ 0.07
SPG11-201ENST00000261866 FHOD3Q2V2M9 1422 aa15.49■□□□□ 0.07
SPG11-201ENST00000261866 KTN1Q86UP2 1357 aaKnown RBP15.49■□□□□ 0.07
SPG11-201ENST00000261866 MSH5O43196 834 aa15.49■□□□□ 0.07
SPG11-201ENST00000261866 AMPHP49418 695 aa15.48■□□□□ 0.07
SPG11-201ENST00000261866 GOLGA6L4A6NEF3 574 aa15.48■□□□□ 0.07
SPG11-201ENST00000261866 G3V3G9 751 aa15.47■□□□□ 0.07
SPG11-201ENST00000261866 DCAF8Q5TAQ9 597 aa15.47■□□□□ 0.07
SPG11-201ENST00000261866 SPAG9O60271 1321 aaKnown RBP15.47■□□□□ 0.07
SPG11-201ENST00000261866 TAF7LQ5H9L4 462 aa15.47■□□□□ 0.07
SPG11-201ENST00000261866 RRP7AQ9Y3A4 280 aaKnown RBP15.47■□□□□ 0.07
SPG11-201ENST00000261866 GORABQ5T7V8 394 aa15.47■□□□□ 0.07
SPG11-201ENST00000261866 CLUAP1Q96AJ1 413 aa15.47■□□□□ 0.07
SPG11-201ENST00000261866 MS4A1P11836 297 aa15.46■□□□□ 0.07
SPG11-201ENST00000261866 AEBP2Q6ZN18 517 aaPredicted RBP15.46■□□□□ 0.07
SPG11-201ENST00000261866 TMX4Q9H1E5 349 aaPredicted RBP15.46■□□□□ 0.07
SPG11-201ENST00000261866 NOL8Q76FK4 1167 aaKnown RBP15.45■□□□□ 0.06
SPG11-201ENST00000261866 CHMP4BQ9H444 224 aaKnown RBP15.45■□□□□ 0.06
SPG11-201ENST00000261866 NGEFQ8N5V2 710 aa15.45■□□□□ 0.06
SPG11-201ENST00000261866 HSCBQ8IWL3 235 aa15.45■□□□□ 0.06
SPG11-201ENST00000261866 RAB3GAP2Q9H2M9 1393 aa15.43■□□□□ 0.06
SPG11-201ENST00000261866 ANKRD30AQ9BXX3 1397 aa15.43■□□□□ 0.06
SPG11-201ENST00000261866 ELL2O00472 640 aaPredicted RBP15.42■□□□□ 0.06
SPG11-201ENST00000261866 JPH4Q96JJ6 628 aa15.42■□□□□ 0.06
SPG11-201ENST00000261866 SMARCA2P51531 1590 aa15.42■□□□□ 0.06
SPG11-201ENST00000261866 MCCP23508 829 aa15.41■□□□□ 0.06
SPG11-201ENST00000261866 EVA1CP58658 441 aa15.41■□□□□ 0.06
SPG11-201ENST00000261866 GTF2E1P29083 439 aaPredicted RBP15.41■□□□□ 0.06
SPG11-201ENST00000261866 TRIM6-TRIM34B2RNG4 842 aa15.41■□□□□ 0.06
SPG11-201ENST00000261866 WIZO95785 1651 aa15.41■□□□□ 0.06
SPG11-201ENST00000261866 FOXD4L1Q9NU39 408 aa15.41■□□□□ 0.06
SPG11-201ENST00000261866 KIAA1211Q6ZU35 1233 aa15.4■□□□□ 0.06
SPG11-201ENST00000261866 DRC7Q8IY82 874 aa15.4■□□□□ 0.06
SPG11-201ENST00000261866 SMC4Q9NTJ3 1288 aa15.4■□□□□ 0.06
SPG11-201ENST00000261866 STK31Q9BXU1 1019 aa15.4■□□□□ 0.06
SPG11-201ENST00000261866 KLHL34Q8N239 644 aa15.39■□□□□ 0.05
SPG11-201ENST00000261866 MEX3CQ5U5Q3 659 aaKnown RBP15.39■□□□□ 0.05
SPG11-201ENST00000261866 FRAT2O75474 233 aaPredicted RBP15.39■□□□□ 0.05
SPG11-201ENST00000261866 SYTL4Q96C24 671 aaPredicted RBP15.39■□□□□ 0.05
SPG11-201ENST00000261866 NOP58Q9Y2X3 529 aaKnown RBP15.38■□□□□ 0.05
SPG11-201ENST00000261866 NECTIN2Q92692 538 aa15.38■□□□□ 0.05
SPG11-201ENST00000261866 L3MBTL2Q969R5 705 aa15.38■□□□□ 0.05
SPG11-201ENST00000261866 HSP90B1P14625 803 aaKnown RBP15.38■□□□□ 0.05
SPG11-201ENST00000261866 WWC1Q8IX03 1113 aa15.38■□□□□ 0.05
SPG11-201ENST00000261866 TERF2IPQ9NYB0 399 aa15.37■□□□□ 0.05
SPG11-201ENST00000261866 MINK1Q8N4C8 1332 aaPredicted RBP15.37■□□□□ 0.05
SPG11-201ENST00000261866 TOMM22Q9NS69 142 aa15.37■□□□□ 0.05
SPG11-201ENST00000261866 IPO8O15397 1037 aaKnown RBP15.36■□□□□ 0.05
SPG11-201ENST00000261866 ANP32EQ9BTT0 268 aa15.36■□□□□ 0.05
SPG11-201ENST00000261866 VPS8Q8N3P4 1428 aa15.36■□□□□ 0.05
SPG11-201ENST00000261866 MFAP1P55081 439 aaKnown RBP15.35■□□□□ 0.05
SPG11-201ENST00000261866 RCAN3Q9UKA8 241 aa15.35■□□□□ 0.05
SPG11-201ENST00000261866 BCL2L13Q9BXK5 485 aa15.35■□□□□ 0.05
SPG11-201ENST00000261866 GZF1Q9H116 711 aaPredicted RBP15.35■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 131.1 ms