RNA–Protein interactions for RNA: ENST00000261448.5

CASQ2-201, Transcript of calsequestrin 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CASQ2, Length 2,674 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASQ2-201ENST00000261448 ABCC10Q5T3U5 1492 aa17.21■□□□□ 0.34
CASQ2-201ENST00000261448 ITSN2Q9NZM3 1697 aa17.2■□□□□ 0.34
CASQ2-201ENST00000261448 CLASP1Q7Z460 1538 aa17.2■□□□□ 0.34
CASQ2-201ENST00000261448 CAMSAP2Q08AD1 1489 aa17.2■□□□□ 0.34
CASQ2-201ENST00000261448 ROCK1Q13464 1354 aa17.2■□□□□ 0.34
CASQ2-201ENST00000261448 TIMELESSQ9UNS1 1208 aa17.18■□□□□ 0.34
CASQ2-201ENST00000261448 ZNF777Q9ULD5 760 aaPredicted RBP17.16■□□□□ 0.34
CASQ2-201ENST00000261448 DENND4BO75064 1496 aaPredicted RBP17.16■□□□□ 0.34
CASQ2-201ENST00000261448 CDC42BPAQ5VT25 1732 aa17.15■□□□□ 0.34
CASQ2-201ENST00000261448 TRIM52Q96A61 297 aa17.13■□□□□ 0.33
CASQ2-201ENST00000261448 ABCC2Q92887 1545 aa17.12■□□□□ 0.33
CASQ2-201ENST00000261448 PPP1R15AO75807 674 aaPredicted RBP17.11■□□□□ 0.33
CASQ2-201ENST00000261448 NCOA1Q15788 1441 aa17.1■□□□□ 0.33
CASQ2-201ENST00000261448 MPHOSPH9Q99550 1183 aa17.1■□□□□ 0.33
CASQ2-201ENST00000261448 CROCC2H7BZ55 1655 aa17.08■□□□□ 0.32
CASQ2-201ENST00000261448 MIER1Q8N108 512 aa17.08■□□□□ 0.32
CASQ2-201ENST00000261448 ADGRL2O95490 1459 aa17.08■□□□□ 0.32
CASQ2-201ENST00000261448 TONSLQ96HA7 1378 aa17.06■□□□□ 0.32
CASQ2-201ENST00000261448 ADGBQ8N7X0 1667 aa17.06■□□□□ 0.32
CASQ2-201ENST00000261448 UHRF1BP1LA0JNW5 1464 aa17.04■□□□□ 0.32
CASQ2-201ENST00000261448 ACIN1Q9UKV3 1341 aaKnown RBP17.04■□□□□ 0.32
CASQ2-201ENST00000261448 CDC42BPBQ9Y5S2 1711 aa17.04■□□□□ 0.32
CASQ2-201ENST00000261448 ANKRD30AQ9BXX3 1397 aa17.03■□□□□ 0.32
CASQ2-201ENST00000261448 MBD5Q9P267 1494 aa17.03■□□□□ 0.32
CASQ2-201ENST00000261448 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.03■□□□□ 0.32
CASQ2-201ENST00000261448 PREX2Q70Z35 1606 aa17.03■□□□□ 0.32
CASQ2-201ENST00000261448 HNRNPMP52272 730 aaKnown RBP eCLIP17.03■□□□□ 0.32
CASQ2-201ENST00000261448 FOXD1Q16676 465 aa17.03■□□□□ 0.32
CASQ2-201ENST00000261448 KDM5BQ9UGL1 1544 aa17.02■□□□□ 0.32
CASQ2-201ENST00000261448 TTC37Q6PGP7 1564 aa17.02■□□□□ 0.32
CASQ2-201ENST00000261448 SHANK2Q9UPX8 1470 aa17.02■□□□□ 0.31
CASQ2-201ENST00000261448 SAMD9LQ8IVG5 1584 aa17.01■□□□□ 0.31
CASQ2-201ENST00000261448 C9orf84Q5VXU9 1444 aa17.01■□□□□ 0.31
CASQ2-201ENST00000261448 ZCCHC11Q5TAX3 1644 aaKnown RBP17■□□□□ 0.31
CASQ2-201ENST00000261448 ARHGEF5Q12774 1597 aa17■□□□□ 0.31
CASQ2-201ENST00000261448 ANKRD30BQ9BXX2 1392 aa16.98■□□□□ 0.31
CASQ2-201ENST00000261448 KCNH8Q96L42 1107 aa16.98■□□□□ 0.31
CASQ2-201ENST00000261448 PZPP20742 1482 aa16.98■□□□□ 0.31
CASQ2-201ENST00000261448 TSPY4P0CV99 314 aa16.98■□□□□ 0.31
CASQ2-201ENST00000261448 TSPY10P0CW01 314 aa16.98■□□□□ 0.31
CASQ2-201ENST00000261448 SLC4A1APQ9BWU0 796 aaKnown RBP16.98■□□□□ 0.31
CASQ2-201ENST00000261448 ANKRD50Q9ULJ7 1429 aa16.98■□□□□ 0.31
CASQ2-201ENST00000261448 ARHGAP5Q13017 1502 aa16.95■□□□□ 0.3
CASQ2-201ENST00000261448 CCDC141Q6ZP82 1450 aa16.94■□□□□ 0.3
CASQ2-201ENST00000261448 RSPH4AQ5TD94 716 aa16.93■□□□□ 0.3
CASQ2-201ENST00000261448 SYCP2Q9BX26 1530 aa16.93■□□□□ 0.3
CASQ2-201ENST00000261448 MYO5CQ9NQX4 1742 aa16.92■□□□□ 0.3
CASQ2-201ENST00000261448 KIF15Q9NS87 1388 aa16.92■□□□□ 0.3
CASQ2-201ENST00000261448 HIRIP3Q9BW71 556 aaPredicted RBP16.92■□□□□ 0.3
CASQ2-201ENST00000261448 RPRD2Q5VT52 1461 aaKnown RBP16.91■□□□□ 0.3
CASQ2-201ENST00000261448 PLCH2O75038 1416 aa16.91■□□□□ 0.3
CASQ2-201ENST00000261448 OSCARQ8IYS5 282 aa16.91■□□□□ 0.3
CASQ2-201ENST00000261448 L3MBTL2Q969R5 705 aa16.9■□□□□ 0.3
CASQ2-201ENST00000261448 KIAA1107Q9UPP5 1409 aa16.9■□□□□ 0.3
CASQ2-201ENST00000261448 ARHGEF12Q9NZN5 1544 aa16.88■□□□□ 0.29
CASQ2-201ENST00000261448 PKD2Q13563 968 aa16.87■□□□□ 0.29
CASQ2-201ENST00000261448 NUP155O75694 1391 aa16.87■□□□□ 0.29
CASQ2-201ENST00000261448 PLEKHH2Q8IVE3 1493 aa16.86■□□□□ 0.29
CASQ2-201ENST00000261448 MAST1Q9Y2H9 1570 aa16.86■□□□□ 0.29
CASQ2-201ENST00000261448 TEX14Q8IWB6 1497 aa16.86■□□□□ 0.29
CASQ2-201ENST00000261448 KDM5DQ9BY66 1539 aa16.85■□□□□ 0.29
CASQ2-201ENST00000261448 EFCAB2Q5VUJ9 269 aa16.84■□□□□ 0.29
CASQ2-201ENST00000261448 WDR7Q9Y4E6 1490 aa16.84■□□□□ 0.29
CASQ2-201ENST00000261448 DDX10Q13206 875 aaKnown RBP16.83■□□□□ 0.29
CASQ2-201ENST00000261448 YTHDC1Q96MU7 727 aaKnown RBP16.83■□□□□ 0.28
CASQ2-201ENST00000261448 CENPBP07199 599 aaPredicted RBP16.82■□□□□ 0.28
CASQ2-201ENST00000261448 ABCC1P33527 1531 aa16.81■□□□□ 0.28
CASQ2-201ENST00000261448 NBPF8Q3BBV2 869 aa16.8■□□□□ 0.28
CASQ2-201ENST00000261448 PLXNC1O60486 1568 aa16.8■□□□□ 0.28
CASQ2-201ENST00000261448 TRAPPC8Q9Y2L5 1435 aa16.79■□□□□ 0.28
CASQ2-201ENST00000261448 ARAP3Q8WWN8 1544 aa16.79■□□□□ 0.28
CASQ2-201ENST00000261448 SCAF1Q9H7N4 1312 aaKnown RBP16.78■□□□□ 0.28
CASQ2-201ENST00000261448 ASXL2Q76L83 1435 aa16.78■□□□□ 0.28
CASQ2-201ENST00000261448 FAM135AQ9P2D6 1515 aa16.76■□□□□ 0.27
CASQ2-201ENST00000261448 HSPA5P11021 654 aaKnown RBP16.76■□□□□ 0.27
CASQ2-201ENST00000261448 ABCA9Q8IUA7 1624 aa16.75■□□□□ 0.27
CASQ2-201ENST00000261448 DUOX2Q9NRD8 1548 aa16.74■□□□□ 0.27
CASQ2-201ENST00000261448 UNC13BO14795 1591 aa16.74■□□□□ 0.27
CASQ2-201ENST00000261448 AFAP1Q8N556 730 aa16.73■□□□□ 0.27
CASQ2-201ENST00000261448 EIF4G2P78344 907 aaKnown RBP eCLIP16.73■□□□□ 0.27
CASQ2-201ENST00000261448 FANCAO15360 1455 aa16.72■□□□□ 0.27
CASQ2-201ENST00000261448 ERBINQ96RT1 1412 aa16.71■□□□□ 0.27
CASQ2-201ENST00000261448 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.7■□□□□ 0.26
CASQ2-201ENST00000261448 SPAG9O60271 1321 aaKnown RBP16.7■□□□□ 0.26
CASQ2-201ENST00000261448 RTEL1-TNFRSF6BF6WH68 1400 aa16.69■□□□□ 0.26
CASQ2-201ENST00000261448 NPM1P06748 294 aaKnown RBP eCLIP16.69■□□□□ 0.26
CASQ2-201ENST00000261448 WASHC2AQ641Q2 1341 aa16.69■□□□□ 0.26
CASQ2-201ENST00000261448 MAGI2Q86UL8 1455 aa16.68■□□□□ 0.26
CASQ2-201ENST00000261448 ZFYVE16Q7Z3T8 1539 aa16.68■□□□□ 0.26
CASQ2-201ENST00000261448 IQGAP3Q86VI3 1631 aa16.68■□□□□ 0.26
CASQ2-201ENST00000261448 SPATA31E1Q6ZUB1 1445 aa16.67■□□□□ 0.26
CASQ2-201ENST00000261448 PLA2R1Q13018 1463 aa16.67■□□□□ 0.26
CASQ2-201ENST00000261448 C11orf95C9JLR9 678 aaPredicted RBP16.65■□□□□ 0.26
CASQ2-201ENST00000261448 SCAPERQ9BY12 1400 aa16.65■□□□□ 0.26
CASQ2-201ENST00000261448 ADGRL1O94910 1474 aa16.65■□□□□ 0.26
CASQ2-201ENST00000261448 UHRF1BP1Q6BDS2 1440 aa16.64■□□□□ 0.26
CASQ2-201ENST00000261448 ZNF326Q5BKZ1 582 aaKnown RBP16.63■□□□□ 0.25
CASQ2-201ENST00000261448 INO80Q9ULG1 1556 aaPredicted RBP16.62■□□□□ 0.25
CASQ2-201ENST00000261448 ATP7AQ04656 1500 aa16.62■□□□□ 0.25
CASQ2-201ENST00000261448 CCDC144AA2RUR9 1427 aa16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms