RNA–Protein interactions for RNA: ENST00000260327.8

CTDSPL2-201, Transcript of CTD small phosphatase like 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTDSPL2, Length 6,828 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-201ENST00000260327 PLEKHG5O94827 1062 aa12.44□□□□□ -0.42
CTDSPL2-201ENST00000260327 NPM1P06748 294 aaKnown RBP eCLIP12.44□□□□□ -0.42
CTDSPL2-201ENST00000260327 ARHGAP35Q9NRY4 1499 aa12.44□□□□□ -0.42
CTDSPL2-201ENST00000260327 DHX57Q6P158 1386 aaKnown RBP12.44□□□□□ -0.42
CTDSPL2-201ENST00000260327 CUX2O14529 1486 aa12.43□□□□□ -0.42
CTDSPL2-201ENST00000260327 GSE1Q14687 1217 aa12.43□□□□□ -0.42
CTDSPL2-201ENST00000260327 PRKCSHP14314 528 aaPredicted RBP12.43□□□□□ -0.42
CTDSPL2-201ENST00000260327 TNNT3P45378 269 aaPredicted RBP12.43□□□□□ -0.42
CTDSPL2-201ENST00000260327 GOLGA6L6A8MZA4 724 aa12.42□□□□□ -0.42
CTDSPL2-201ENST00000260327 TMF1P82094 1093 aa12.41□□□□□ -0.42
CTDSPL2-201ENST00000260327 WIZO95785 1651 aa12.41□□□□□ -0.42
CTDSPL2-201ENST00000260327 NUDCQ9Y266 331 aa12.41□□□□□ -0.42
CTDSPL2-201ENST00000260327 MAPK8IP3Q9UPT6 1336 aa12.41□□□□□ -0.42
CTDSPL2-201ENST00000260327 U2SURPO15042 1029 aaKnown RBP12.4□□□□□ -0.42
CTDSPL2-201ENST00000260327 GBP4Q96PP9 640 aa12.4□□□□□ -0.42
CTDSPL2-201ENST00000260327 MPHOSPH9Q99550 1183 aa12.4□□□□□ -0.42
CTDSPL2-201ENST00000260327 KIAA2012Q0VF49 1180 aa12.4□□□□□ -0.42
CTDSPL2-201ENST00000260327 PKD2Q13563 968 aa12.39□□□□□ -0.43
CTDSPL2-201ENST00000260327 FANCIQ9NVI1 1328 aa12.39□□□□□ -0.43
CTDSPL2-201ENST00000260327 FOXD4L1Q9NU39 408 aa12.38□□□□□ -0.43
CTDSPL2-201ENST00000260327 L3MBTL2Q969R5 705 aa12.38□□□□□ -0.43
CTDSPL2-201ENST00000260327 USP35Q9P2H5 1018 aa12.38□□□□□ -0.43
CTDSPL2-201ENST00000260327 RUSC2Q8N2Y8 1516 aa12.38□□□□□ -0.43
CTDSPL2-201ENST00000260327 GOLGA6L4A6NEF3 574 aa12.38□□□□□ -0.43
CTDSPL2-201ENST00000260327 EIF4G1Q04637 1599 aaKnown RBP12.37□□□□□ -0.43
CTDSPL2-201ENST00000260327 KTN1Q86UP2 1357 aaKnown RBP12.37□□□□□ -0.43
CTDSPL2-201ENST00000260327 MFAP1P55081 439 aaKnown RBP12.36□□□□□ -0.43
CTDSPL2-201ENST00000260327 NRDCO43847 1150 aa12.36□□□□□ -0.43
CTDSPL2-201ENST00000260327 RAPGEF2Q9Y4G8 1499 aa12.35□□□□□ -0.43
CTDSPL2-201ENST00000260327 C14orf37Q86TY3 774 aa12.35□□□□□ -0.43
CTDSPL2-201ENST00000260327 A0A0U1RQG5 324 aaPredicted RBP12.34□□□□□ -0.43
CTDSPL2-201ENST00000260327 NAP1L2Q9ULW6 460 aaPredicted RBP12.34□□□□□ -0.43
CTDSPL2-201ENST00000260327 IL27Q8NEV9 243 aa12.33□□□□□ -0.44
CTDSPL2-201ENST00000260327 PDE4AP27815 886 aa12.33□□□□□ -0.44
CTDSPL2-201ENST00000260327 TULP1O00294 542 aaPredicted RBP12.33□□□□□ -0.44
CTDSPL2-201ENST00000260327 PKNOX2Q96KN3 472 aa12.33□□□□□ -0.44
CTDSPL2-201ENST00000260327 RALBP1Q15311 655 aa12.32□□□□□ -0.44
CTDSPL2-201ENST00000260327 APBB1O00213 710 aa12.32□□□□□ -0.44
CTDSPL2-201ENST00000260327 KCNJ4P48050 445 aa12.32□□□□□ -0.44
CTDSPL2-201ENST00000260327 FGD1P98174 961 aa12.31□□□□□ -0.44
CTDSPL2-201ENST00000260327 MS4A1P11836 297 aa12.31□□□□□ -0.44
CTDSPL2-201ENST00000260327 ROCK2O75116 1388 aaKnown RBP12.31□□□□□ -0.44
CTDSPL2-201ENST00000260327 MORC1Q86VD1 984 aa12.31□□□□□ -0.44
CTDSPL2-201ENST00000260327 PLIN1O60240 522 aa12.31□□□□□ -0.44
CTDSPL2-201ENST00000260327 PTMSP20962 102 aa12.3□□□□□ -0.44
CTDSPL2-201ENST00000260327 FAM13BQ9NYF5 915 aa12.29□□□□□ -0.44
CTDSPL2-201ENST00000260327 POGKQ9P215 609 aa12.29□□□□□ -0.44
CTDSPL2-201ENST00000260327 SAFB2Q14151 953 aaKnown RBP eCLIP12.29□□□□□ -0.44
CTDSPL2-201ENST00000260327 CCDC146Q8IYE0 955 aa12.29□□□□□ -0.44
CTDSPL2-201ENST00000260327 EXOC6Q8TAG9 804 aa12.28□□□□□ -0.44
CTDSPL2-201ENST00000260327 FMN1Q68DA7 1419 aa12.28□□□□□ -0.44
CTDSPL2-201ENST00000260327 CALD1Q05682 793 aaKnown RBP12.28□□□□□ -0.44
CTDSPL2-201ENST00000260327 PRKRIP1Q9H875 184 aaPredicted RBP12.28□□□□□ -0.44
CTDSPL2-201ENST00000260327 OS9Q13438 667 aaPredicted RBP12.27□□□□□ -0.45
CTDSPL2-201ENST00000260327 BRPF3Q9ULD4 1205 aa12.27□□□□□ -0.45
CTDSPL2-201ENST00000260327 FOXD4L5Q5VV16 416 aaPredicted RBP12.26□□□□□ -0.45
CTDSPL2-201ENST00000260327 FOXD4L4Q8WXT5 416 aaPredicted RBP12.26□□□□□ -0.45
CTDSPL2-201ENST00000260327 MCCP23508 829 aa12.26□□□□□ -0.45
CTDSPL2-201ENST00000260327 CLUAP1Q96AJ1 413 aa12.26□□□□□ -0.45
CTDSPL2-201ENST00000260327 FHOD3Q2V2M9 1422 aa12.26□□□□□ -0.45
CTDSPL2-201ENST00000260327 NUP155O75694 1391 aa12.25□□□□□ -0.45
CTDSPL2-201ENST00000260327 ITPRIPQ8IWB1 547 aa12.25□□□□□ -0.45
CTDSPL2-201ENST00000260327 CHMP4BQ9H444 224 aaKnown RBP12.25□□□□□ -0.45
CTDSPL2-201ENST00000260327 GOLGA2Q08379 1002 aa12.25□□□□□ -0.45
CTDSPL2-201ENST00000260327 RWDD1Q9H446 243 aaPredicted RBP12.24□□□□□ -0.45
CTDSPL2-201ENST00000260327 ZBED9Q6R2W3 1325 aa12.24□□□□□ -0.45
CTDSPL2-201ENST00000260327 TOP2AP11388 1531 aaKnown RBP12.24□□□□□ -0.45
CTDSPL2-201ENST00000260327 ZNF771Q7L3S4 317 aaPredicted RBP12.24□□□□□ -0.45
CTDSPL2-201ENST00000260327 NLRP13Q86W25 1043 aa12.24□□□□□ -0.45
CTDSPL2-201ENST00000260327 NOL8Q76FK4 1167 aaKnown RBP12.24□□□□□ -0.45
CTDSPL2-201ENST00000260327 SYAP1Q96A49 352 aaPredicted RBP12.23□□□□□ -0.45
CTDSPL2-201ENST00000260327 A0A0G2JS52 829 aa12.23□□□□□ -0.45
CTDSPL2-201ENST00000260327 SRPK2P78362 688 aaKnown RBP12.23□□□□□ -0.45
CTDSPL2-201ENST00000260327 U2AF1L5P0DN76 240 aaPredicted RBP12.23□□□□□ -0.45
CTDSPL2-201ENST00000260327 U2AF1Q01081 240 aaKnown RBP eCLIP12.23□□□□□ -0.45
CTDSPL2-201ENST00000260327 RRP1P56182 461 aaKnown RBP12.22□□□□□ -0.45
CTDSPL2-201ENST00000260327 SOX12O15370 315 aa12.22□□□□□ -0.45
CTDSPL2-201ENST00000260327 DDX11L8A8MPP1 907 aa12.22□□□□□ -0.45
CTDSPL2-201ENST00000260327 CRBNQ96SW2 442 aa12.22□□□□□ -0.45
CTDSPL2-201ENST00000260327 ST20-MTHFSA0A0A6YYL1 179 aa12.21□□□□□ -0.45
CTDSPL2-201ENST00000260327 FAM161AQ3B820 660 aa12.21□□□□□ -0.45
CTDSPL2-201ENST00000260327 PDE3BQ13370 1112 aa12.21□□□□□ -0.46
CTDSPL2-201ENST00000260327 PMFBP1Q8TBY8 1022 aa12.2□□□□□ -0.46
CTDSPL2-201ENST00000260327 DDX49Q9Y6V7 483 aaKnown RBP12.2□□□□□ -0.46
CTDSPL2-201ENST00000260327 NFKBIBQ15653 356 aa12.2□□□□□ -0.46
CTDSPL2-201ENST00000260327 MYBBP1AQ9BQG0 1328 aaKnown RBP12.19□□□□□ -0.46
CTDSPL2-201ENST00000260327 STK26Q9P289 416 aa12.19□□□□□ -0.46
CTDSPL2-201ENST00000260327 TDRD9Q8NDG6 1382 aaKnown RBP12.18□□□□□ -0.46
CTDSPL2-201ENST00000260327 KIF15Q9NS87 1388 aa12.18□□□□□ -0.46
CTDSPL2-201ENST00000260327 IPO8O15397 1037 aaKnown RBP12.18□□□□□ -0.46
CTDSPL2-201ENST00000260327 FOXD4L6Q3SYB3 417 aaPredicted RBP12.18□□□□□ -0.46
CTDSPL2-201ENST00000260327 FOXD4L3Q6VB84 417 aaPredicted RBP12.18□□□□□ -0.46
CTDSPL2-201ENST00000260327 SMC4Q9NTJ3 1288 aa12.18□□□□□ -0.46
CTDSPL2-201ENST00000260327 PAK3O75914 559 aaPredicted RBP12.17□□□□□ -0.46
CTDSPL2-201ENST00000260327 CENPJQ9HC77 1338 aaPredicted RBP12.17□□□□□ -0.46
CTDSPL2-201ENST00000260327 FAM43AQ8N2R8 423 aa12.17□□□□□ -0.46
CTDSPL2-201ENST00000260327 PODXL2Q9NZ53 605 aa12.17□□□□□ -0.46
CTDSPL2-201ENST00000260327 RRP7AQ9Y3A4 280 aaKnown RBP12.17□□□□□ -0.46
CTDSPL2-201ENST00000260327 BCL2L13Q9BXK5 485 aa12.16□□□□□ -0.46
CTDSPL2-201ENST00000260327 CENPQQ7L2Z9 268 aaPredicted RBP12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms