RNA–Protein interactions for RNA: ENST00000259883.3

PGBD1-201, Transcript of piggyBac transposable element derived 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PGBD1, Length 3,100 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGBD1-201ENST00000259883 DENND4BO75064 1496 aaPredicted RBP18■□□□□ 0.47
PGBD1-201ENST00000259883 GRIN2BQ13224 1484 aa18■□□□□ 0.47
PGBD1-201ENST00000259883 LRRIQ1Q96JM4 1722 aa17.99■□□□□ 0.47
PGBD1-201ENST00000259883 PDS5BQ9NTI5 1447 aa17.98■□□□□ 0.47
PGBD1-201ENST00000259883 SUPT6HQ7KZ85 1726 aaKnown RBP17.98■□□□□ 0.47
PGBD1-201ENST00000259883 PAK3O75914 559 aaPredicted RBP17.97■□□□□ 0.47
PGBD1-201ENST00000259883 TMC1Q8TDI8 760 aa17.97■□□□□ 0.47
PGBD1-201ENST00000259883 PKD2Q13563 968 aa17.96■□□□□ 0.47
PGBD1-201ENST00000259883 CFDP1Q9UEE9 299 aaPredicted RBP17.96■□□□□ 0.47
PGBD1-201ENST00000259883 ZBED9Q6R2W3 1325 aa17.95■□□□□ 0.46
PGBD1-201ENST00000259883 FANCIQ9NVI1 1328 aa17.95■□□□□ 0.46
PGBD1-201ENST00000259883 EHBP1L1Q8N3D4 1523 aa17.94■□□□□ 0.46
PGBD1-201ENST00000259883 CUL7Q14999 1698 aa17.94■□□□□ 0.46
PGBD1-201ENST00000259883 UGGT2Q9NYU1 1516 aa17.92■□□□□ 0.46
PGBD1-201ENST00000259883 EPRSP07814 1512 aaKnown RBP17.91■□□□□ 0.46
PGBD1-201ENST00000259883 NCOA1Q15788 1441 aa17.91■□□□□ 0.46
PGBD1-201ENST00000259883 THOC2Q8NI27 1593 aaKnown RBP17.9■□□□□ 0.46
PGBD1-201ENST00000259883 RGL3Q3MIN7 710 aa17.9■□□□□ 0.46
PGBD1-201ENST00000259883 CARD11Q9BXL7 1154 aa17.9■□□□□ 0.46
PGBD1-201ENST00000259883 ANKRD30BQ9BXX2 1392 aa17.89■□□□□ 0.46
PGBD1-201ENST00000259883 DEKP35659 375 aaKnown RBP17.89■□□□□ 0.45
PGBD1-201ENST00000259883 NOP58Q9Y2X3 529 aaKnown RBP17.87■□□□□ 0.45
PGBD1-201ENST00000259883 USP47Q96K76 1375 aa17.87■□□□□ 0.45
PGBD1-201ENST00000259883 SKAP1Q86WV1 359 aa17.86■□□□□ 0.45
PGBD1-201ENST00000259883 DCAF11Q8TEB1 546 aa17.86■□□□□ 0.45
PGBD1-201ENST00000259883 NUDCQ9Y266 331 aa17.85■□□□□ 0.45
PGBD1-201ENST00000259883 ST20-MTHFSA0A0A6YYL1 179 aa17.85■□□□□ 0.45
PGBD1-201ENST00000259883 SAMD9Q5K651 1589 aa17.85■□□□□ 0.45
PGBD1-201ENST00000259883 DAPK1P53355 1430 aa17.84■□□□□ 0.45
PGBD1-201ENST00000259883 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.84■□□□□ 0.45
PGBD1-201ENST00000259883 LAMC3Q9Y6N6 1575 aa17.84■□□□□ 0.45
PGBD1-201ENST00000259883 ABCC5O15440 1437 aa17.83■□□□□ 0.45
PGBD1-201ENST00000259883 PRG4Q92954 1404 aaPredicted RBP17.83■□□□□ 0.44
PGBD1-201ENST00000259883 ANP32AP39687 249 aaKnown RBP17.82■□□□□ 0.44
PGBD1-201ENST00000259883 RPRD2Q5VT52 1461 aaKnown RBP17.8■□□□□ 0.44
PGBD1-201ENST00000259883 CC2D1BQ5T0F9 858 aaKnown RBP17.8■□□□□ 0.44
PGBD1-201ENST00000259883 EXOC6Q8TAG9 804 aa17.8■□□□□ 0.44
PGBD1-201ENST00000259883 PLIN1O60240 522 aa17.79■□□□□ 0.44
PGBD1-201ENST00000259883 LAS1LQ9Y4W2 734 aaKnown RBP17.79■□□□□ 0.44
PGBD1-201ENST00000259883 NUP155O75694 1391 aa17.78■□□□□ 0.44
PGBD1-201ENST00000259883 ERICH6BQ5W0A0 696 aa17.78■□□□□ 0.44
PGBD1-201ENST00000259883 CHMP7Q8WUX9 453 aaPredicted RBP17.78■□□□□ 0.44
PGBD1-201ENST00000259883 HECW1Q76N89 1606 aa17.77■□□□□ 0.44
PGBD1-201ENST00000259883 HNRNPMP52272 730 aaKnown RBP eCLIP17.77■□□□□ 0.43
PGBD1-201ENST00000259883 ABCA5Q8WWZ7 1642 aa17.77■□□□□ 0.43
PGBD1-201ENST00000259883 ZBTB47Q9UFB7 747 aaPredicted RBP17.76■□□□□ 0.43
PGBD1-201ENST00000259883 PNISRQ8TF01 805 aaKnown RBP17.76■□□□□ 0.43
PGBD1-201ENST00000259883 TCOF1Q13428 1488 aaKnown RBP17.76■□□□□ 0.43
PGBD1-201ENST00000259883 TEX14Q8IWB6 1497 aa17.76■□□□□ 0.43
PGBD1-201ENST00000259883 CDCA7LQ96GN5 454 aa17.75■□□□□ 0.43
PGBD1-201ENST00000259883 IQGAP2Q13576 1575 aa17.75■□□□□ 0.43
PGBD1-201ENST00000259883 ZNF608Q9ULD9 1512 aaPredicted RBP17.75■□□□□ 0.43
PGBD1-201ENST00000259883 DHX29Q7Z478 1369 aaKnown RBP17.74■□□□□ 0.43
PGBD1-201ENST00000259883 MIA2Q96PC5 1412 aa17.74■□□□□ 0.43
PGBD1-201ENST00000259883 RTL5Q5HYW3 569 aaPredicted RBP17.74■□□□□ 0.43
PGBD1-201ENST00000259883 ARHGEF11O15085 1522 aa17.73■□□□□ 0.43
PGBD1-201ENST00000259883 SPATA31E1Q6ZUB1 1445 aa17.72■□□□□ 0.43
PGBD1-201ENST00000259883 GCC2Q8IWJ2 1684 aa17.72■□□□□ 0.43
PGBD1-201ENST00000259883 RTN4Q9NQC3 1192 aaKnown RBP17.71■□□□□ 0.43
PGBD1-201ENST00000259883 TSPY4P0CV99 314 aa17.7■□□□□ 0.42
PGBD1-201ENST00000259883 TSPY10P0CW01 314 aa17.7■□□□□ 0.42
PGBD1-201ENST00000259883 KIF21AQ7Z4S6 1674 aa17.7■□□□□ 0.42
PGBD1-201ENST00000259883 NBPF1Q3BBV0 1214 aa17.7■□□□□ 0.42
PGBD1-201ENST00000259883 PLB1Q6P1J6 1458 aa17.69■□□□□ 0.42
PGBD1-201ENST00000259883 SMG6Q86US8 1419 aaKnown RBP17.69■□□□□ 0.42
PGBD1-201ENST00000259883 IPO9Q96P70 1041 aaKnown RBP17.68■□□□□ 0.42
PGBD1-201ENST00000259883 WDR62O43379 1518 aa17.68■□□□□ 0.42
PGBD1-201ENST00000259883 RCAN3Q9UKA8 241 aa17.67■□□□□ 0.42
PGBD1-201ENST00000259883 PZPP20742 1482 aa17.67■□□□□ 0.42
PGBD1-201ENST00000259883 PLEKHD1A6NEE1 506 aa17.67■□□□□ 0.42
PGBD1-201ENST00000259883 NUP153P49790 1475 aaKnown RBP17.67■□□□□ 0.42
PGBD1-201ENST00000259883 ROCK2O75116 1388 aaKnown RBP17.66■□□□□ 0.42
PGBD1-201ENST00000259883 RRP1P56182 461 aaKnown RBP17.65■□□□□ 0.42
PGBD1-201ENST00000259883 KIAA1107Q9UPP5 1409 aa17.65■□□□□ 0.42
PGBD1-201ENST00000259883 ANKRD50Q9ULJ7 1429 aa17.64■□□□□ 0.41
PGBD1-201ENST00000259883 BCORL1Q5H9F3 1711 aa17.64■□□□□ 0.41
PGBD1-201ENST00000259883 ROCK1Q13464 1354 aa17.64■□□□□ 0.41
PGBD1-201ENST00000259883 CAMSAP2Q08AD1 1489 aa17.64■□□□□ 0.41
PGBD1-201ENST00000259883 ANKRD30AQ9BXX3 1397 aa17.64■□□□□ 0.41
PGBD1-201ENST00000259883 SLC4A3P48751 1232 aa17.63■□□□□ 0.41
PGBD1-201ENST00000259883 MYBBP1AQ9BQG0 1328 aaKnown RBP17.61■□□□□ 0.41
PGBD1-201ENST00000259883 JPH4Q96JJ6 628 aa17.61■□□□□ 0.41
PGBD1-201ENST00000259883 TARBP1Q13395 1621 aaKnown RBP17.6■□□□□ 0.41
PGBD1-201ENST00000259883 KIF15Q9NS87 1388 aa17.6■□□□□ 0.41
PGBD1-201ENST00000259883 PDE4AP27815 886 aa17.58■□□□□ 0.4
PGBD1-201ENST00000259883 DISP1Q96F81 1524 aa17.58■□□□□ 0.4
PGBD1-201ENST00000259883 NEFMP07197 916 aa17.58■□□□□ 0.4
PGBD1-201ENST00000259883 DNMT1P26358 1616 aaKnown RBP17.57■□□□□ 0.4
PGBD1-201ENST00000259883 TROQ12816 1431 aaPredicted RBP17.57■□□□□ 0.4
PGBD1-201ENST00000259883 CRBNQ96SW2 442 aa17.57■□□□□ 0.4
PGBD1-201ENST00000259883 PANK3Q9H999 370 aa17.56■□□□□ 0.4
PGBD1-201ENST00000259883 GPATCH8Q9UKJ3 1502 aaKnown RBP17.56■□□□□ 0.4
PGBD1-201ENST00000259883 PBRM1Q86U86 1689 aa17.56■□□□□ 0.4
PGBD1-201ENST00000259883 C20orf194Q5TEA3 1177 aa17.56■□□□□ 0.4
PGBD1-201ENST00000259883 ADAMTS12P58397 1594 aa17.55■□□□□ 0.4
PGBD1-201ENST00000259883 KIF14Q15058 1648 aa17.55■□□□□ 0.4
PGBD1-201ENST00000259883 NLRP13Q86W25 1043 aa17.54■□□□□ 0.4
PGBD1-201ENST00000259883 KTN1Q86UP2 1357 aaKnown RBP17.54■□□□□ 0.4
PGBD1-201ENST00000259883 RALBP1Q15311 655 aa17.53■□□□□ 0.4
PGBD1-201ENST00000259883 IL27Q8NEV9 243 aa17.53■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 160.6 ms