RNA–Protein interactions for RNA: ENST00000259803.7

GCM1-201, Transcript of glial cells missing homolog 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GCM1, Length 2,765 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCM1-201ENST00000259803 CLIP1P30622 1438 aa14.83□□□□□ -0.04
GCM1-201ENST00000259803 ZFP91Q96JP5 570 aaPredicted RBP14.83□□□□□ -0.04
GCM1-201ENST00000259803 TEX2Q8IWB9 1127 aa14.82□□□□□ -0.04
GCM1-201ENST00000259803 IGSF3O75054 1194 aa14.82□□□□□ -0.04
GCM1-201ENST00000259803 ATP1B4Q9UN42 357 aaPredicted RBP14.81□□□□□ -0.04
GCM1-201ENST00000259803 CLASP1Q7Z460 1538 aa14.81□□□□□ -0.04
GCM1-201ENST00000259803 CTTNBP2Q8WZ74 1663 aa14.81□□□□□ -0.04
GCM1-201ENST00000259803 MSH5O43196 834 aa14.8□□□□□ -0.04
GCM1-201ENST00000259803 CCDC9Q9Y3X0 531 aaKnown RBP14.8□□□□□ -0.04
GCM1-201ENST00000259803 DIEXFQ68CQ4 756 aaKnown RBP14.8□□□□□ -0.04
GCM1-201ENST00000259803 RBM19Q9Y4C8 960 aaKnown RBP14.8□□□□□ -0.04
GCM1-201ENST00000259803 ARHGAP35Q9NRY4 1499 aa14.8□□□□□ -0.04
GCM1-201ENST00000259803 CHRM1P11229 460 aaPredicted RBP14.79□□□□□ -0.04
GCM1-201ENST00000259803 ARAP1Q96P48 1450 aa14.79□□□□□ -0.04
GCM1-201ENST00000259803 DISP1Q96F81 1524 aa14.79□□□□□ -0.04
GCM1-201ENST00000259803 CYB5RLQ6IPT4 315 aa14.78□□□□□ -0.04
GCM1-201ENST00000259803 CHMP4BQ9H444 224 aaKnown RBP14.78□□□□□ -0.04
GCM1-201ENST00000259803 BBXQ8WY36 941 aaPredicted RBP14.75□□□□□ -0.05
GCM1-201ENST00000259803 FANCIQ9NVI1 1328 aa14.75□□□□□ -0.05
GCM1-201ENST00000259803 NCLP19338 710 aaKnown RBP14.74□□□□□ -0.05
GCM1-201ENST00000259803 PPP6R1Q9UPN7 881 aa14.74□□□□□ -0.05
GCM1-201ENST00000259803 ARHGEF11O15085 1522 aa14.72□□□□□ -0.05
GCM1-201ENST00000259803 UGGT2Q9NYU1 1516 aa14.72□□□□□ -0.05
GCM1-201ENST00000259803 TICAM2Q86XR7 235 aa14.7□□□□□ -0.06
GCM1-201ENST00000259803 PLB1Q6P1J6 1458 aa14.7□□□□□ -0.06
GCM1-201ENST00000259803 FTSJ3Q8IY81 847 aaKnown RBP14.7□□□□□ -0.06
GCM1-201ENST00000259803 SECISBP2LQ93073 1101 aaKnown RBP14.7□□□□□ -0.06
GCM1-201ENST00000259803 DNAJC5Q9H3Z4 198 aa14.7□□□□□ -0.06
GCM1-201ENST00000259803 KIAA0556O60303 1618 aa14.7□□□□□ -0.06
GCM1-201ENST00000259803 SHROOM2Q13796 1616 aa14.69□□□□□ -0.06
GCM1-201ENST00000259803 CARMIL2Q6F5E8 1435 aa14.68□□□□□ -0.06
GCM1-201ENST00000259803 PTPRGP23470 1445 aa14.68□□□□□ -0.06
GCM1-201ENST00000259803 GTF3C5Q9Y5Q8 519 aaPredicted RBP14.68□□□□□ -0.06
GCM1-201ENST00000259803 SAMD9Q5K651 1589 aa14.67□□□□□ -0.06
GCM1-201ENST00000259803 CNPY4Q8N129 248 aa14.67□□□□□ -0.06
GCM1-201ENST00000259803 GTF2E1P29083 439 aaPredicted RBP14.66□□□□□ -0.06
GCM1-201ENST00000259803 RIMBP3CA6NJZ7 1639 aa14.65□□□□□ -0.06
GCM1-201ENST00000259803 RIMBP3BA6NNM3 1639 aa14.65□□□□□ -0.06
GCM1-201ENST00000259803 RIMBP3Q9UFD9 1639 aa14.65□□□□□ -0.06
GCM1-201ENST00000259803 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.65□□□□□ -0.06
GCM1-201ENST00000259803 HNRNPUL2Q1KMD3 747 aaKnown RBP14.65□□□□□ -0.06
GCM1-201ENST00000259803 CFAP44Q96MT7 982 aa14.64□□□□□ -0.07
GCM1-201ENST00000259803 CANXP27824 592 aaKnown RBP14.63□□□□□ -0.07
GCM1-201ENST00000259803 BRPF3Q9ULD4 1205 aa14.63□□□□□ -0.07
GCM1-201ENST00000259803 C11orf95C9JLR9 678 aaPredicted RBP14.62□□□□□ -0.07
GCM1-201ENST00000259803 PUS7Q96PZ0 661 aaKnown RBP14.62□□□□□ -0.07
GCM1-201ENST00000259803 RNF216Q9NWF9 866 aaPredicted RBP14.62□□□□□ -0.07
GCM1-201ENST00000259803 YTHDC1Q96MU7 727 aaKnown RBP14.62□□□□□ -0.07
GCM1-201ENST00000259803 RRP9O43818 475 aaKnown RBP14.61□□□□□ -0.07
GCM1-201ENST00000259803 EFCAB5A4FU69 1503 aa14.6□□□□□ -0.07
GCM1-201ENST00000259803 CNGB1Q14028 1251 aaPredicted RBP14.58□□□□□ -0.07
GCM1-201ENST00000259803 VPS8Q8N3P4 1428 aa14.58□□□□□ -0.08
GCM1-201ENST00000259803 CLSTN1O94985 981 aa14.58□□□□□ -0.08
GCM1-201ENST00000259803 PCF11O94913 1555 aaKnown RBP14.58□□□□□ -0.08
GCM1-201ENST00000259803 KANK4Q5T7N3 995 aaPredicted RBP14.57□□□□□ -0.08
GCM1-201ENST00000259803 PRDM10Q9NQV6 1147 aa14.56□□□□□ -0.08
GCM1-201ENST00000259803 CDK13Q14004 1512 aaKnown RBP14.56□□□□□ -0.08
GCM1-201ENST00000259803 STAC3Q96MF2 364 aa14.56□□□□□ -0.08
GCM1-201ENST00000259803 ZNF592Q92610 1267 aa14.55□□□□□ -0.08
GCM1-201ENST00000259803 FMN1Q68DA7 1419 aa14.55□□□□□ -0.08
GCM1-201ENST00000259803 UACAQ9BZF9 1416 aa14.54□□□□□ -0.08
GCM1-201ENST00000259803 NUP153P49790 1475 aaKnown RBP14.54□□□□□ -0.08
GCM1-201ENST00000259803 ARID4BQ4LE39 1312 aaPredicted RBP14.54□□□□□ -0.08
GCM1-201ENST00000259803 CCER1Q8TC90 406 aaPredicted RBP14.54□□□□□ -0.08
GCM1-201ENST00000259803 HSP90AA2PQ14568 343 aaPredicted RBP14.53□□□□□ -0.08
GCM1-201ENST00000259803 KCNH8Q96L42 1107 aa14.52□□□□□ -0.08
GCM1-201ENST00000259803 ARID3AQ99856 593 aa14.52□□□□□ -0.08
GCM1-201ENST00000259803 RTL5Q5HYW3 569 aaPredicted RBP14.51□□□□□ -0.09
GCM1-201ENST00000259803 ADCY10Q96PN6 1610 aa14.51□□□□□ -0.09
GCM1-201ENST00000259803 WWC1Q8IX03 1113 aa14.51□□□□□ -0.09
GCM1-201ENST00000259803 PRDM4Q9UKN5 801 aa14.5□□□□□ -0.09
GCM1-201ENST00000259803 CASKIN1Q8WXD9 1431 aa14.5□□□□□ -0.09
GCM1-201ENST00000259803 LRRIQ1Q96JM4 1722 aa14.49□□□□□ -0.09
GCM1-201ENST00000259803 ABCA8O94911 1581 aa14.49□□□□□ -0.09
GCM1-201ENST00000259803 RAPGEF6Q8TEU7 1601 aa14.49□□□□□ -0.09
GCM1-201ENST00000259803 ATP10BO94823 1461 aa14.48□□□□□ -0.09
GCM1-201ENST00000259803 CALD1Q05682 793 aaKnown RBP14.48□□□□□ -0.09
GCM1-201ENST00000259803 EPRSP07814 1512 aaKnown RBP14.47□□□□□ -0.09
GCM1-201ENST00000259803 KCNG1Q9UIX4 513 aa14.47□□□□□ -0.09
GCM1-201ENST00000259803 ABCC2Q92887 1545 aa14.46□□□□□ -0.09
GCM1-201ENST00000259803 GRIPAP1Q4V328 841 aa14.46□□□□□ -0.09
GCM1-201ENST00000259803 FYCO1Q9BQS8 1478 aa14.45□□□□□ -0.1
GCM1-201ENST00000259803 MAGI3Q5TCQ9 1506 aa14.45□□□□□ -0.1
GCM1-201ENST00000259803 TMED8Q6PL24 325 aaPredicted RBP14.45□□□□□ -0.1
GCM1-201ENST00000259803 NPM1P06748 294 aaKnown RBP eCLIP14.44□□□□□ -0.1
GCM1-201ENST00000259803 PLCD4Q9BRC7 762 aa14.43□□□□□ -0.1
GCM1-201ENST00000259803 PSMD1Q99460 953 aa14.41□□□□□ -0.1
GCM1-201ENST00000259803 HECW1Q76N89 1606 aa14.41□□□□□ -0.1
GCM1-201ENST00000259803 MTUS2Q5JR59 1369 aa14.4□□□□□ -0.1
GCM1-201ENST00000259803 PLEKHD1A6NEE1 506 aa14.4□□□□□ -0.1
GCM1-201ENST00000259803 PTMAP06454 111 aaKnown RBP14.4□□□□□ -0.1
GCM1-201ENST00000259803 ZCCHC11Q5TAX3 1644 aaKnown RBP14.39□□□□□ -0.11
GCM1-201ENST00000259803 KDM5BQ9UGL1 1544 aa14.39□□□□□ -0.11
GCM1-201ENST00000259803 ASXL2Q76L83 1435 aa14.39□□□□□ -0.11
GCM1-201ENST00000259803 TIAM1Q13009 1591 aa14.38□□□□□ -0.11
GCM1-201ENST00000259803 UHRF1BP1LA0JNW5 1464 aa14.37□□□□□ -0.11
GCM1-201ENST00000259803 TRHP20396 242 aaPredicted RBP14.37□□□□□ -0.11
GCM1-201ENST00000259803 VGFO15240 615 aaPredicted RBP14.36□□□□□ -0.11
GCM1-201ENST00000259803 PPM1GO15355 546 aaPredicted RBP14.36□□□□□ -0.11
GCM1-201ENST00000259803 MCCP23508 829 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms