RNA–Protein interactions for RNA: ENST00000259008.6

BRIP1-201, Transcript of BRCA1 interacting protein C-terminal helicase 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene BRIP1, Length 6,048 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRIP1-201ENST00000259008 ACIN1Q9UKV3 1341 aaKnown RBP8.44□□□□□ -1.06
BRIP1-201ENST00000259008 PRG4Q92954 1404 aaPredicted RBP8.44□□□□□ -1.06
BRIP1-201ENST00000259008 HDGFL2Q7Z4V5 671 aaPredicted RBP8.43□□□□□ -1.06
BRIP1-201ENST00000259008 MYH16Q9H6N6 1097 aa8.43□□□□□ -1.06
BRIP1-201ENST00000259008 NUDCQ9Y266 331 aa8.42□□□□□ -1.06
BRIP1-201ENST00000259008 GRIN2BQ13224 1484 aa8.42□□□□□ -1.06
BRIP1-201ENST00000259008 TMF1P82094 1093 aa8.42□□□□□ -1.06
BRIP1-201ENST00000259008 IFT140Q96RY7 1462 aa8.42□□□□□ -1.06
BRIP1-201ENST00000259008 SNAPC4Q5SXM2 1469 aa8.41□□□□□ -1.06
BRIP1-201ENST00000259008 EVA1CP58658 441 aa8.41□□□□□ -1.06
BRIP1-201ENST00000259008 LTV1Q96GA3 475 aaPredicted RBP8.41□□□□□ -1.06
BRIP1-201ENST00000259008 MSH5O43196 834 aa8.41□□□□□ -1.06
BRIP1-201ENST00000259008 PIP4K2BP78356 416 aa8.4□□□□□ -1.06
BRIP1-201ENST00000259008 RUSC2Q8N2Y8 1516 aa8.4□□□□□ -1.06
BRIP1-201ENST00000259008 MORC1Q86VD1 984 aa8.39□□□□□ -1.07
BRIP1-201ENST00000259008 GOLGA6L2Q8N9W4 650 aaPredicted RBP8.39□□□□□ -1.07
BRIP1-201ENST00000259008 SUGP2Q8IX01 1082 aaKnown RBP eCLIP8.39□□□□□ -1.074e-6■■□□□ 11.9
BRIP1-201ENST00000259008 KLHL34Q8N239 644 aa8.39□□□□□ -1.07
BRIP1-201ENST00000259008 ROCK2O75116 1388 aaKnown RBP8.38□□□□□ -1.07
BRIP1-201ENST00000259008 GOLGA2Q08379 1002 aa8.38□□□□□ -1.07
BRIP1-201ENST00000259008 TRAK1Q9UPV9 953 aa8.37□□□□□ -1.07
BRIP1-201ENST00000259008 HSP90AA1P07900 732 aaKnown RBP8.37□□□□□ -1.07
BRIP1-201ENST00000259008 RTF1Q92541 710 aaKnown RBP8.37□□□□□ -1.07
BRIP1-201ENST00000259008 VPS8Q8N3P4 1428 aa8.37□□□□□ -1.07
BRIP1-201ENST00000259008 ATF3P18847 181 aa8.37□□□□□ -1.07
BRIP1-201ENST00000259008 RSPH4AQ5TD94 716 aa8.37□□□□□ -1.07
BRIP1-201ENST00000259008 MPHOSPH9Q99550 1183 aa8.37□□□□□ -1.07
BRIP1-201ENST00000259008 ARHGAP5Q13017 1502 aa8.36□□□□□ -1.07
BRIP1-201ENST00000259008 TAOK2Q9UL54 1235 aa8.36□□□□□ -1.07
BRIP1-201ENST00000259008 TULP1O00294 542 aaPredicted RBP8.36□□□□□ -1.07
BRIP1-201ENST00000259008 TMX4Q9H1E5 349 aaPredicted RBP8.35□□□□□ -1.07
BRIP1-201ENST00000259008 AMPHP49418 695 aa8.34□□□□□ -1.07
BRIP1-201ENST00000259008 RTL5Q5HYW3 569 aaPredicted RBP8.34□□□□□ -1.07
BRIP1-201ENST00000259008 TOPBP1Q92547 1522 aa8.34□□□□□ -1.07
BRIP1-201ENST00000259008 IGF1RP08069 1367 aa8.34□□□□□ -1.07
BRIP1-201ENST00000259008 SETD5Q9C0A6 1442 aa8.34□□□□□ -1.07
BRIP1-201ENST00000259008 OS9Q13438 667 aaPredicted RBP8.34□□□□□ -1.07
BRIP1-201ENST00000259008 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.34□□□□□ -1.07
BRIP1-201ENST00000259008 NUTM2BA6NNL0 878 aaPredicted RBP8.34□□□□□ -1.07
BRIP1-201ENST00000259008 NUTM2EB1AL46 878 aaPredicted RBP8.34□□□□□ -1.07
BRIP1-201ENST00000259008 NUTM2AQ8IVF1 878 aaPredicted RBP8.34□□□□□ -1.07
BRIP1-201ENST00000259008 PSME1Q06323 249 aa8.33□□□□□ -1.08
BRIP1-201ENST00000259008 FTSJ3Q8IY81 847 aaKnown RBP8.33□□□□□ -1.08
BRIP1-201ENST00000259008 IRX6P78412 446 aaPredicted RBP8.33□□□□□ -1.08
BRIP1-201ENST00000259008 SYTL4Q96C24 671 aaPredicted RBP8.33□□□□□ -1.08
BRIP1-201ENST00000259008 CFTRP13569 1480 aa8.32□□□□□ -1.08
BRIP1-201ENST00000259008 HMGXB3Q12766 1538 aa8.32□□□□□ -1.08
BRIP1-201ENST00000259008 RAPGEF3O95398 923 aa8.32□□□□□ -1.08
BRIP1-201ENST00000259008 PNNQ9H307 717 aaKnown RBP8.32□□□□□ -1.08
BRIP1-201ENST00000259008 MINK1Q8N4C8 1332 aaPredicted RBP8.32□□□□□ -1.08
BRIP1-201ENST00000259008 AFAP1Q8N556 730 aa8.32□□□□□ -1.08
BRIP1-201ENST00000259008 EIF3AQ14152 1382 aaKnown RBP8.31□□□□□ -1.08
BRIP1-201ENST00000259008 BICRAQ9NZM4 1560 aa8.31□□□□□ -1.08
BRIP1-201ENST00000259008 FKBP8Q14318 412 aa8.31□□□□□ -1.08
BRIP1-201ENST00000259008 FRAT1Q92837 279 aaPredicted RBP8.31□□□□□ -1.08
BRIP1-201ENST00000259008 SYNJ2O15056 1496 aa8.31□□□□□ -1.08
BRIP1-201ENST00000259008 UPF2Q9HAU5 1272 aaKnown RBP8.31□□□□□ -1.08
BRIP1-201ENST00000259008 ZNF644Q9H582 1327 aaPredicted RBP8.3□□□□□ -1.08
BRIP1-201ENST00000259008 G3V3G9 751 aa8.3□□□□□ -1.08
BRIP1-201ENST00000259008 DCAF8Q5TAQ9 597 aa8.3□□□□□ -1.08
BRIP1-201ENST00000259008 POLA1P09884 1462 aaPredicted RBP8.3□□□□□ -1.08
BRIP1-201ENST00000259008 PROSER2Q86WR7 435 aaPredicted RBP8.3□□□□□ -1.08
BRIP1-201ENST00000259008 TERF2IPQ9NYB0 399 aa8.3□□□□□ -1.08
BRIP1-201ENST00000259008 ISY1Q9ULR0 285 aaKnown RBP8.3□□□□□ -1.08
BRIP1-201ENST00000259008 LAMC3Q9Y6N6 1575 aa8.29□□□□□ -1.08
BRIP1-201ENST00000259008 VGFO15240 615 aaPredicted RBP8.29□□□□□ -1.08
BRIP1-201ENST00000259008 NUTM2GQ5VZR2 741 aa8.29□□□□□ -1.08
BRIP1-201ENST00000259008 GTF3C3Q9Y5Q9 886 aa8.29□□□□□ -1.08
BRIP1-201ENST00000259008 ABCF1Q8NE71 845 aaKnown RBP eCLIP8.28□□□□□ -1.08
BRIP1-201ENST00000259008 TXNDC2Q86VQ3 553 aa8.28□□□□□ -1.08
BRIP1-201ENST00000259008 CCDC144AA2RUR9 1427 aa8.28□□□□□ -1.08
BRIP1-201ENST00000259008 DNMBPQ6XZF7 1577 aa8.27□□□□□ -1.08
BRIP1-201ENST00000259008 UNC13AQ9UPW8 1703 aa8.27□□□□□ -1.08
BRIP1-201ENST00000259008 CCDC136Q96JN2 1154 aa8.27□□□□□ -1.09
BRIP1-201ENST00000259008 USP35Q9P2H5 1018 aa8.27□□□□□ -1.09
BRIP1-201ENST00000259008 RAB3GAP2Q9H2M9 1393 aa8.27□□□□□ -1.09
BRIP1-201ENST00000259008 DCAF8L1A6NGE4 600 aa8.27□□□□□ -1.09
BRIP1-201ENST00000259008 U2AF1L5P0DN76 240 aaPredicted RBP8.27□□□□□ -1.09
BRIP1-201ENST00000259008 GTF2E1P29083 439 aaPredicted RBP8.27□□□□□ -1.09
BRIP1-201ENST00000259008 U2AF1Q01081 240 aaKnown RBP eCLIP8.27□□□□□ -1.094e-6■■□□□ 12.1
BRIP1-201ENST00000259008 HSPA5P11021 654 aaKnown RBP8.27□□□□□ -1.09
BRIP1-201ENST00000259008 CHMP3Q9Y3E7 222 aa8.27□□□□□ -1.09
BRIP1-201ENST00000259008 ESCO1Q5FWF5 840 aa8.26□□□□□ -1.09
BRIP1-201ENST00000259008 SF3B2Q13435 895 aaKnown RBP8.25□□□□□ -1.09
BRIP1-201ENST00000259008 POGZQ7Z3K3 1410 aa8.25□□□□□ -1.09
BRIP1-201ENST00000259008 UACAQ9BZF9 1416 aa8.25□□□□□ -1.09
BRIP1-201ENST00000259008 CUX1P39880 1505 aa8.25□□□□□ -1.09
BRIP1-201ENST00000259008 PPP1R1BQ9UD71 204 aaPredicted RBP8.24□□□□□ -1.09
BRIP1-201ENST00000259008 SYNJ1O43426 1573 aa8.24□□□□□ -1.09
BRIP1-201ENST00000259008 SCAPERQ9BY12 1400 aa8.24□□□□□ -1.09
BRIP1-201ENST00000259008 COG3Q96JB2 828 aa8.24□□□□□ -1.09
BRIP1-201ENST00000259008 ANP32AP39687 249 aaKnown RBP8.23□□□□□ -1.09
BRIP1-201ENST00000259008 C1orf141Q5JVX7 400 aa8.23□□□□□ -1.09
BRIP1-201ENST00000259008 STRN4Q9NRL3 753 aa8.23□□□□□ -1.09
BRIP1-201ENST00000259008 TPRNQ4KMQ1 711 aa8.23□□□□□ -1.09
BRIP1-201ENST00000259008 THEMISQ8N1K5 641 aaPredicted RBP8.23□□□□□ -1.09
BRIP1-201ENST00000259008 KIF15Q9NS87 1388 aa8.22□□□□□ -1.09
BRIP1-201ENST00000259008 MIER1Q8N108 512 aa8.22□□□□□ -1.09
BRIP1-201ENST00000259008 NAP1L2Q9ULW6 460 aaPredicted RBP8.22□□□□□ -1.09
BRIP1-201ENST00000259008 ANKLE2Q86XL3 938 aa8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 120.3 ms