RNA–Protein interactions for RNA: ENST00000256062.9

TMTC1-201, Transcript of transmembrane and tetratricopeptide repeat containing 1, humanhuman

TSL 1 (best) BASIC

Gene TMTC1, Length 8,805 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMTC1-201ENST00000256062 TMF1P82094 1093 aa11.1□□□□□ -0.63
TMTC1-201ENST00000256062 NUTM2FA1L443 756 aa11.1□□□□□ -0.63
TMTC1-201ENST00000256062 HSP90B1P14625 803 aaKnown RBP11.1□□□□□ -0.63
TMTC1-201ENST00000256062 CREBRFQ8IUR6 639 aa11.09□□□□□ -0.63
TMTC1-201ENST00000256062 MCCP23508 829 aa11.09□□□□□ -0.63
TMTC1-201ENST00000256062 FOXD4L1Q9NU39 408 aa11.08□□□□□ -0.64
TMTC1-201ENST00000256062 ITPRIPQ8IWB1 547 aa11.08□□□□□ -0.64
TMTC1-201ENST00000256062 GORABQ5T7V8 394 aa11.08□□□□□ -0.64
TMTC1-201ENST00000256062 WWC1Q8IX03 1113 aa11.08□□□□□ -0.64
TMTC1-201ENST00000256062 CHMP4BQ9H444 224 aaKnown RBP11.08□□□□□ -0.64
TMTC1-201ENST00000256062 LTV1Q96GA3 475 aaPredicted RBP11.08□□□□□ -0.64
TMTC1-201ENST00000256062 SLKQ9H2G2 1235 aaPredicted RBP11.07□□□□□ -0.64
TMTC1-201ENST00000256062 U2AF1L5P0DN76 240 aaPredicted RBP11.07□□□□□ -0.64
TMTC1-201ENST00000256062 U2AF1Q01081 240 aaKnown RBP eCLIP11.07□□□□□ -0.64
TMTC1-201ENST00000256062 NOC3LQ8WTT2 800 aaKnown RBP11.07□□□□□ -0.64
TMTC1-201ENST00000256062 CHAF1AQ13111 956 aaPredicted RBP11.07□□□□□ -0.64
TMTC1-201ENST00000256062 MS4A1P11836 297 aa11.07□□□□□ -0.64
TMTC1-201ENST00000256062 KIAA1211Q6ZU35 1233 aa11.06□□□□□ -0.64
TMTC1-201ENST00000256062 TOMM22Q9NS69 142 aa11.06□□□□□ -0.64
TMTC1-201ENST00000256062 MSNP26038 577 aaKnown RBP11.06□□□□□ -0.64
TMTC1-201ENST00000256062 G3V3G9 751 aa11.06□□□□□ -0.64
TMTC1-201ENST00000256062 DCAF8Q5TAQ9 597 aa11.06□□□□□ -0.64
TMTC1-201ENST00000256062 FBXO3Q9UK99 471 aa11.06□□□□□ -0.64
TMTC1-201ENST00000256062 TMX4Q9H1E5 349 aaPredicted RBP11.05□□□□□ -0.64
TMTC1-201ENST00000256062 VPS53Q5VIR6 699 aa11.05□□□□□ -0.64
TMTC1-201ENST00000256062 NACADO15069 1562 aa11.05□□□□□ -0.64
TMTC1-201ENST00000256062 TAF7LQ5H9L4 462 aa11.05□□□□□ -0.64
TMTC1-201ENST00000256062 SLC4A10Q6U841 1118 aa11.04□□□□□ -0.64
TMTC1-201ENST00000256062 HDGFL2Q7Z4V5 671 aaPredicted RBP11.04□□□□□ -0.64
TMTC1-201ENST00000256062 CCNB3Q8WWL7 1395 aa11.04□□□□□ -0.64
TMTC1-201ENST00000256062 RASSF8Q8NHQ8 419 aa11.04□□□□□ -0.64
TMTC1-201ENST00000256062 FOXD4L5Q5VV16 416 aaPredicted RBP11.04□□□□□ -0.64
TMTC1-201ENST00000256062 FOXD4L4Q8WXT5 416 aaPredicted RBP11.04□□□□□ -0.64
TMTC1-201ENST00000256062 CEP162Q5TB80 1403 aa11.03□□□□□ -0.64
TMTC1-201ENST00000256062 HDGFP51858 240 aaKnown RBP11.03□□□□□ -0.64
TMTC1-201ENST00000256062 CLUAP1Q96AJ1 413 aa11.03□□□□□ -0.64
TMTC1-201ENST00000256062 KIAA2012Q0VF49 1180 aa11.03□□□□□ -0.64
TMTC1-201ENST00000256062 DCAF1Q9Y4B6 1507 aa11.02□□□□□ -0.64
TMTC1-201ENST00000256062 RB1CC1Q8TDY2 1594 aa11.02□□□□□ -0.65
TMTC1-201ENST00000256062 MFAP1P55081 439 aaKnown RBP11.02□□□□□ -0.65
TMTC1-201ENST00000256062 TRIM6-TRIM34B2RNG4 842 aa11.02□□□□□ -0.65
TMTC1-201ENST00000256062 KANK1Q14678 1352 aa11.02□□□□□ -0.65
TMTC1-201ENST00000256062 ERCC6Q03468 1493 aa11.01□□□□□ -0.65
TMTC1-201ENST00000256062 HSPA5P11021 654 aaKnown RBP11.01□□□□□ -0.65
TMTC1-201ENST00000256062 MSH5O43196 834 aa11.01□□□□□ -0.65
TMTC1-201ENST00000256062 FRAT2O75474 233 aaPredicted RBP11.01□□□□□ -0.65
TMTC1-201ENST00000256062 CCDC146Q8IYE0 955 aa11.01□□□□□ -0.65
TMTC1-201ENST00000256062 UNC13AQ9UPW8 1703 aa11.01□□□□□ -0.65
TMTC1-201ENST00000256062 GTF2E1P29083 439 aaPredicted RBP11□□□□□ -0.65
TMTC1-201ENST00000256062 PKD2Q13563 968 aa11□□□□□ -0.65
TMTC1-201ENST00000256062 RAD21O60216 631 aa10.99□□□□□ -0.65
TMTC1-201ENST00000256062 A0A0U1RQG5 324 aaPredicted RBP10.98□□□□□ -0.65
TMTC1-201ENST00000256062 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.98□□□□□ -0.65
TMTC1-201ENST00000256062 DEKP35659 375 aaKnown RBP10.98□□□□□ -0.65
TMTC1-201ENST00000256062 STK31Q9BXU1 1019 aa10.98□□□□□ -0.65
TMTC1-201ENST00000256062 EIF4G1Q04637 1599 aaKnown RBP10.97□□□□□ -0.65
TMTC1-201ENST00000256062 MARCH6O60337 910 aa10.97□□□□□ -0.65
TMTC1-201ENST00000256062 NGDNQ8NEJ9 315 aaKnown RBP10.96□□□□□ -0.65
TMTC1-201ENST00000256062 IPO8O15397 1037 aaKnown RBP10.96□□□□□ -0.65
TMTC1-201ENST00000256062 GOLGA3Q08378 1498 aa10.96□□□□□ -0.65
TMTC1-201ENST00000256062 ELL2O00472 640 aaPredicted RBP10.95□□□□□ -0.66
TMTC1-201ENST00000256062 KLHL34Q8N239 644 aa10.95□□□□□ -0.66
TMTC1-201ENST00000256062 NGEFQ8N5V2 710 aa10.95□□□□□ -0.66
TMTC1-201ENST00000256062 FOXD4L6Q3SYB3 417 aaPredicted RBP10.95□□□□□ -0.66
TMTC1-201ENST00000256062 FOXD4L3Q6VB84 417 aaPredicted RBP10.95□□□□□ -0.66
TMTC1-201ENST00000256062 SMC4Q9NTJ3 1288 aa10.95□□□□□ -0.66
TMTC1-201ENST00000256062 PES1O00541 588 aaKnown RBP10.95□□□□□ -0.66
TMTC1-201ENST00000256062 L1TD1Q5T7N2 865 aaKnown RBP10.95□□□□□ -0.66
TMTC1-201ENST00000256062 RRP7AQ9Y3A4 280 aaKnown RBP10.94□□□□□ -0.66
TMTC1-201ENST00000256062 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.93□□□□□ -0.66
TMTC1-201ENST00000256062 AMPHP49418 695 aa10.93□□□□□ -0.66
TMTC1-201ENST00000256062 RWDD1Q9H446 243 aaPredicted RBP10.93□□□□□ -0.66
TMTC1-201ENST00000256062 KTN1Q86UP2 1357 aaKnown RBP10.93□□□□□ -0.66
TMTC1-201ENST00000256062 SPAG9O60271 1321 aaKnown RBP10.92□□□□□ -0.66
TMTC1-201ENST00000256062 GBP4Q96PP9 640 aa10.92□□□□□ -0.66
TMTC1-201ENST00000256062 RCAN3Q9UKA8 241 aa10.91□□□□□ -0.66
TMTC1-201ENST00000256062 SAMD1Q6SPF0 538 aaPredicted RBP10.91□□□□□ -0.66
TMTC1-201ENST00000256062 WRNQ14191 1432 aaPredicted RBP eCLIP10.91□□□□□ -0.66
TMTC1-201ENST00000256062 KIF3BO15066 747 aa10.91□□□□□ -0.66
TMTC1-201ENST00000256062 MYO15BQ96JP2 1530 aa10.91□□□□□ -0.66
TMTC1-201ENST00000256062 FBXW7Q969H0 707 aa10.91□□□□□ -0.66
TMTC1-201ENST00000256062 KIF27Q86VH2 1401 aa10.9□□□□□ -0.66
TMTC1-201ENST00000256062 ROCK2O75116 1388 aaKnown RBP10.9□□□□□ -0.67
TMTC1-201ENST00000256062 RBM19Q9Y4C8 960 aaKnown RBP10.9□□□□□ -0.67
TMTC1-201ENST00000256062 BCL2L13Q9BXK5 485 aa10.89□□□□□ -0.67
TMTC1-201ENST00000256062 HTATSF1O43719 755 aaKnown RBP10.89□□□□□ -0.67
TMTC1-201ENST00000256062 GPATCH3Q96I76 525 aa10.89□□□□□ -0.67
TMTC1-201ENST00000256062 TPM4P67936 248 aa10.88□□□□□ -0.67
TMTC1-201ENST00000256062 CEP89Q96ST8 783 aa10.88□□□□□ -0.67
TMTC1-201ENST00000256062 NECTIN2Q92692 538 aa10.88□□□□□ -0.67
TMTC1-201ENST00000256062 PATL2C9JE40 543 aaKnown RBP10.88□□□□□ -0.67
TMTC1-201ENST00000256062 SYTL4Q96C24 671 aaPredicted RBP10.88□□□□□ -0.67
TMTC1-201ENST00000256062 RILPL2Q969X0 211 aa10.87□□□□□ -0.67
TMTC1-201ENST00000256062 TRAK1Q9UPV9 953 aa10.87□□□□□ -0.67
TMTC1-201ENST00000256062 SF3A1Q15459 793 aaKnown RBP10.87□□□□□ -0.67
TMTC1-201ENST00000256062 CALD1Q05682 793 aaKnown RBP10.87□□□□□ -0.67
TMTC1-201ENST00000256062 EEA1Q15075 1411 aa10.87□□□□□ -0.67
TMTC1-201ENST00000256062 EID1Q9Y6B2 187 aa10.86□□□□□ -0.67
TMTC1-201ENST00000256062 TCERG1O14776 1098 aaKnown RBP10.86□□□□□ -0.67
TMTC1-201ENST00000256062 CCAR2Q8N163 923 aaKnown RBP10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms