RNA–Protein interactions for RNA: ENST00000254940.9

NIP7-201, Transcript of NIP7, nucleolar pre-rRNA processing protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NIP7, Length 2,402 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIP7-201ENST00000254940 MYO5CQ9NQX4 1742 aa18.43■□□□□ 0.54
NIP7-201ENST00000254940 ABCA9Q8IUA7 1624 aa18.43■□□□□ 0.54
NIP7-201ENST00000254940 MYOM3Q5VTT5 1437 aa18.42■□□□□ 0.54
NIP7-201ENST00000254940 HNRNPMP52272 730 aaKnown RBP eCLIP18.4■□□□□ 0.54
NIP7-201ENST00000254940 FGD6Q6ZV73 1430 aa18.38■□□□□ 0.53
NIP7-201ENST00000254940 PREX2Q70Z35 1606 aa18.38■□□□□ 0.53
NIP7-201ENST00000254940 MAP3K4Q9Y6R4 1608 aa18.38■□□□□ 0.53
NIP7-201ENST00000254940 PLCH2O75038 1416 aa18.37■□□□□ 0.53
NIP7-201ENST00000254940 FANCAO15360 1455 aa18.36■□□□□ 0.53
NIP7-201ENST00000254940 ITSN2Q9NZM3 1697 aa18.35■□□□□ 0.53
NIP7-201ENST00000254940 PPRC1Q5VV67 1664 aaKnown RBP18.35■□□□□ 0.53
NIP7-201ENST00000254940 CHIC2Q9UKJ5 165 aa18.35■□□□□ 0.53
NIP7-201ENST00000254940 PTPN23Q9H3S7 1636 aa18.35■□□□□ 0.53
NIP7-201ENST00000254940 GLI2P10070 1586 aa18.34■□□□□ 0.53
NIP7-201ENST00000254940 EFCAB2Q5VUJ9 269 aa18.34■□□□□ 0.53
NIP7-201ENST00000254940 SAMD9LQ8IVG5 1584 aa18.34■□□□□ 0.53
NIP7-201ENST00000254940 CAMSAP2Q08AD1 1489 aa18.33■□□□□ 0.53
NIP7-201ENST00000254940 RAPGEF3O95398 923 aa18.32■□□□□ 0.52
NIP7-201ENST00000254940 SYCP2Q9BX26 1530 aa18.31■□□□□ 0.52
NIP7-201ENST00000254940 AFAP1Q8N556 730 aa18.31■□□□□ 0.52
NIP7-201ENST00000254940 MYT1LQ9UL68 1186 aa18.3■□□□□ 0.52
NIP7-201ENST00000254940 ARHGEF12Q9NZN5 1544 aa18.3■□□□□ 0.52
NIP7-201ENST00000254940 AKNAQ7Z591 1439 aa18.29■□□□□ 0.52
NIP7-201ENST00000254940 ADGRL1O94910 1474 aa18.28■□□□□ 0.52
NIP7-201ENST00000254940 SCAPERQ9BY12 1400 aa18.28■□□□□ 0.52
NIP7-201ENST00000254940 RRBP1Q9P2E9 1410 aaKnown RBP18.27■□□□□ 0.52
NIP7-201ENST00000254940 TRAPPC8Q9Y2L5 1435 aa18.26■□□□□ 0.51
NIP7-201ENST00000254940 MIA2Q96PC5 1412 aa18.25■□□□□ 0.51
NIP7-201ENST00000254940 PTPRKQ15262 1439 aa18.24■□□□□ 0.51
NIP7-201ENST00000254940 COL17A1Q9UMD9 1497 aaPredicted RBP18.24■□□□□ 0.51
NIP7-201ENST00000254940 ABCC1P33527 1531 aa18.23■□□□□ 0.51
NIP7-201ENST00000254940 RRP7BPQ9NSQ0 103 aa18.22■□□□□ 0.51
NIP7-201ENST00000254940 TCOF1Q13428 1488 aaKnown RBP18.21■□□□□ 0.51
NIP7-201ENST00000254940 TEX14Q8IWB6 1497 aa18.2■□□□□ 0.5
NIP7-201ENST00000254940 MBD5Q9P267 1494 aa18.2■□□□□ 0.5
NIP7-201ENST00000254940 ABCC5O15440 1437 aa18.2■□□□□ 0.5
NIP7-201ENST00000254940 DAPK1P53355 1430 aa18.19■□□□□ 0.5
NIP7-201ENST00000254940 ARAP3Q8WWN8 1544 aa18.18■□□□□ 0.5
NIP7-201ENST00000254940 NEO1Q92859 1461 aa18.17■□□□□ 0.5
NIP7-201ENST00000254940 CFAP74Q9C0B2 1584 aa18.17■□□□□ 0.5
NIP7-201ENST00000254940 DENND4BO75064 1496 aaPredicted RBP18.16■□□□□ 0.5
NIP7-201ENST00000254940 DNMT1P26358 1616 aaKnown RBP18.16■□□□□ 0.5
NIP7-201ENST00000254940 TSPY4P0CV99 314 aa18.15■□□□□ 0.5
NIP7-201ENST00000254940 TSPY10P0CW01 314 aa18.15■□□□□ 0.5
NIP7-201ENST00000254940 CCER1Q8TC90 406 aaPredicted RBP18.15■□□□□ 0.5
NIP7-201ENST00000254940 SPAG9O60271 1321 aaKnown RBP18.15■□□□□ 0.5
NIP7-201ENST00000254940 CCDC141Q6ZP82 1450 aa18.14■□□□□ 0.49
NIP7-201ENST00000254940 POGZQ7Z3K3 1410 aa18.14■□□□□ 0.49
NIP7-201ENST00000254940 FRMPD1Q5SYB0 1578 aa18.13■□□□□ 0.49
NIP7-201ENST00000254940 C9orf84Q5VXU9 1444 aa18.13■□□□□ 0.49
NIP7-201ENST00000254940 KDM6BO15054 1643 aa18.12■□□□□ 0.49
NIP7-201ENST00000254940 RICTORQ6R327 1708 aa18.12■□□□□ 0.49
NIP7-201ENST00000254940 PLEKHH2Q8IVE3 1493 aa18.12■□□□□ 0.49
NIP7-201ENST00000254940 KIAA1107Q9UPP5 1409 aa18.12■□□□□ 0.49
NIP7-201ENST00000254940 CROCC2H7BZ55 1655 aa18.11■□□□□ 0.49
NIP7-201ENST00000254940 YEATS2Q9ULM3 1422 aa18.1■□□□□ 0.49
NIP7-201ENST00000254940 ARHGEF5Q12774 1597 aa18.09■□□□□ 0.49
NIP7-201ENST00000254940 ZNF518AQ6AHZ1 1483 aa18.09■□□□□ 0.49
NIP7-201ENST00000254940 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.06■□□□□ 0.48
NIP7-201ENST00000254940 KIDINS220Q9ULH0 1771 aa18.06■□□□□ 0.48
NIP7-201ENST00000254940 ATP7AQ04656 1500 aa18.05■□□□□ 0.48
NIP7-201ENST00000254940 ZFYVE16Q7Z3T8 1539 aa18.04■□□□□ 0.48
NIP7-201ENST00000254940 KIF15Q9NS87 1388 aa18.03■□□□□ 0.48
NIP7-201ENST00000254940 HECW2Q9P2P5 1572 aa18.03■□□□□ 0.48
NIP7-201ENST00000254940 KDM5CP41229 1560 aa18.03■□□□□ 0.48
NIP7-201ENST00000254940 RSPH4AQ5TD94 716 aa18.02■□□□□ 0.48
NIP7-201ENST00000254940 ABCA6Q8N139 1617 aa18.02■□□□□ 0.48
NIP7-201ENST00000254940 NCOA1Q15788 1441 aa18.02■□□□□ 0.48
NIP7-201ENST00000254940 ADGBQ8N7X0 1667 aa18.02■□□□□ 0.48
NIP7-201ENST00000254940 MLECQ14165 292 aa18.02■□□□□ 0.47
NIP7-201ENST00000254940 INO80Q9ULG1 1556 aaPredicted RBP18.02■□□□□ 0.47
NIP7-201ENST00000254940 ANKRD30AQ9BXX3 1397 aa18.01■□□□□ 0.47
NIP7-201ENST00000254940 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.01■□□□□ 0.473e-6■□□□□ 10.5
NIP7-201ENST00000254940 NAIPQ13075 1403 aa17.99■□□□□ 0.47
NIP7-201ENST00000254940 SHANK2Q9UPX8 1470 aa17.98■□□□□ 0.47
NIP7-201ENST00000254940 ARID4BQ4LE39 1312 aaPredicted RBP17.98■□□□□ 0.47
NIP7-201ENST00000254940 ZEB1P37275 1124 aaPredicted RBP17.98■□□□□ 0.47
NIP7-201ENST00000254940 DIP2CQ9Y2E4 1556 aa17.97■□□□□ 0.47
NIP7-201ENST00000254940 SIGLEC1Q9BZZ2 1709 aa17.97■□□□□ 0.47
NIP7-201ENST00000254940 RAB3GAP2Q9H2M9 1393 aa17.97■□□□□ 0.47
NIP7-201ENST00000254940 TRIM52Q96A61 297 aa17.97■□□□□ 0.47
NIP7-201ENST00000254940 MLH3Q9UHC1 1453 aa17.96■□□□□ 0.47
NIP7-201ENST00000254940 KIF3BO15066 747 aa17.96■□□□□ 0.47
NIP7-201ENST00000254940 MAST1Q9Y2H9 1570 aa17.96■□□□□ 0.47
NIP7-201ENST00000254940 GGT6Q6P531 493 aa17.95■□□□□ 0.46
NIP7-201ENST00000254940 SETD5Q9C0A6 1442 aa17.95■□□□□ 0.46
NIP7-201ENST00000254940 ADGRL2O95490 1459 aa17.94■□□□□ 0.46
NIP7-201ENST00000254940 PLPPR3Q6T4P5 718 aa17.94■□□□□ 0.46
NIP7-201ENST00000254940 ZMYM4Q5VZL5 1548 aa17.94■□□□□ 0.46
NIP7-201ENST00000254940 ANKRD50Q9ULJ7 1429 aa17.94■□□□□ 0.46
NIP7-201ENST00000254940 HFM1A2PYH4 1435 aa17.93■□□□□ 0.46
NIP7-201ENST00000254940 ROCK1Q13464 1354 aa17.93■□□□□ 0.46
NIP7-201ENST00000254940 A2MP01023 1474 aa17.92■□□□□ 0.46
NIP7-201ENST00000254940 RTEL1-TNFRSF6BF6WH68 1400 aa17.92■□□□□ 0.46
NIP7-201ENST00000254940 PLXNC1O60486 1568 aa17.92■□□□□ 0.46
NIP7-201ENST00000254940 GCC2Q8IWJ2 1684 aa17.91■□□□□ 0.46
NIP7-201ENST00000254940 ARHGEF40Q8TER5 1519 aa17.9■□□□□ 0.46
NIP7-201ENST00000254940 ATP10AO60312 1499 aa17.89■□□□□ 0.45
NIP7-201ENST00000254940 DHX29Q7Z478 1369 aaKnown RBP17.89■□□□□ 0.45
NIP7-201ENST00000254940 FOXD1Q16676 465 aa17.89■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms