RNA–Protein interactions for RNA: ENST00000253812.7

PCDHGA3-201, Transcript of protocadherin gamma subfamily A, 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGA3, Length 4,771 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3-201ENST00000253812 CCNB3Q8WWL7 1395 aa16.75■□□□□ 0.27
PCDHGA3-201ENST00000253812 KANK4Q5T7N3 995 aaPredicted RBP16.74■□□□□ 0.27
PCDHGA3-201ENST00000253812 SMARCA4P51532 1647 aa16.74■□□□□ 0.27
PCDHGA3-201ENST00000253812 SLKQ9H2G2 1235 aaPredicted RBP16.74■□□□□ 0.27
PCDHGA3-201ENST00000253812 VPS8Q8N3P4 1428 aa16.74■□□□□ 0.27
PCDHGA3-201ENST00000253812 SENP3-EIF4A1A0A087X0R7 540 aa16.73■□□□□ 0.27
PCDHGA3-201ENST00000253812 SPRYD3Q8NCJ5 442 aa16.72■□□□□ 0.27
PCDHGA3-201ENST00000253812 TIMELESSQ9UNS1 1208 aa16.72■□□□□ 0.27
PCDHGA3-201ENST00000253812 PODXL2Q9NZ53 605 aa16.72■□□□□ 0.27
PCDHGA3-201ENST00000253812 CFAP44Q96MT7 982 aa16.71■□□□□ 0.27
PCDHGA3-201ENST00000253812 FANCIQ9NVI1 1328 aa16.7■□□□□ 0.26
PCDHGA3-201ENST00000253812 SYAP1Q96A49 352 aaPredicted RBP16.7■□□□□ 0.26
PCDHGA3-201ENST00000253812 ZBTB7CA1YPR0 619 aa16.7■□□□□ 0.26
PCDHGA3-201ENST00000253812 A0A0U1RQG5 324 aaPredicted RBP16.69■□□□□ 0.26
PCDHGA3-201ENST00000253812 GOLGA6L1Q8N7Z2 621 aa16.68■□□□□ 0.26
PCDHGA3-201ENST00000253812 FRAT1Q92837 279 aaPredicted RBP16.68■□□□□ 0.26
PCDHGA3-201ENST00000253812 CFAP53Q96M91 514 aa16.67■□□□□ 0.26
PCDHGA3-201ENST00000253812 SETQ01105 290 aaPredicted RBP16.64■□□□□ 0.25
PCDHGA3-201ENST00000253812 CALD1Q05682 793 aaKnown RBP16.63■□□□□ 0.25
PCDHGA3-201ENST00000253812 ZNF771Q7L3S4 317 aaPredicted RBP16.63■□□□□ 0.25
PCDHGA3-201ENST00000253812 KNSTRNQ9Y448 316 aa16.63■□□□□ 0.25
PCDHGA3-201ENST00000253812 CALRP27797 417 aaKnown RBP16.63■□□□□ 0.25
PCDHGA3-201ENST00000253812 MCCP23508 829 aa16.62■□□□□ 0.25
PCDHGA3-201ENST00000253812 RUSC2Q8N2Y8 1516 aa16.61■□□□□ 0.25
PCDHGA3-201ENST00000253812 CDCA8Q53HL2 280 aa16.61■□□□□ 0.25
PCDHGA3-201ENST00000253812 FGD1P98174 961 aa16.61■□□□□ 0.25
PCDHGA3-201ENST00000253812 ANO8Q9HCE9 1232 aaPredicted RBP16.61■□□□□ 0.25
PCDHGA3-201ENST00000253812 RAPGEF2Q9Y4G8 1499 aa16.59■□□□□ 0.25
PCDHGA3-201ENST00000253812 MAP7D2Q96T17 732 aa16.58■□□□□ 0.25
PCDHGA3-201ENST00000253812 CARD11Q9BXL7 1154 aa16.58■□□□□ 0.25
PCDHGA3-201ENST00000253812 PPP1R15AO75807 674 aaPredicted RBP16.58■□□□□ 0.24
PCDHGA3-201ENST00000253812 FAM13BQ9NYF5 915 aa16.58■□□□□ 0.24
PCDHGA3-201ENST00000253812 DDX11L8A8MPP1 907 aa16.57■□□□□ 0.24
PCDHGA3-201ENST00000253812 KCNJ4P48050 445 aa16.57■□□□□ 0.24
PCDHGA3-201ENST00000253812 HTATSF1O43719 755 aaKnown RBP16.56■□□□□ 0.24
PCDHGA3-201ENST00000253812 NEUROD2Q15784 382 aa16.55■□□□□ 0.24
PCDHGA3-201ENST00000253812 MTERF4Q7Z6M4 381 aaKnown RBP16.55■□□□□ 0.24
PCDHGA3-201ENST00000253812 CARMIL2Q6F5E8 1435 aa16.55■□□□□ 0.24
PCDHGA3-201ENST00000253812 ARHGAP35Q9NRY4 1499 aa16.55■□□□□ 0.24
PCDHGA3-201ENST00000253812 NOC3LQ8WTT2 800 aaKnown RBP16.54■□□□□ 0.24
PCDHGA3-201ENST00000253812 FMN1Q68DA7 1419 aa16.54■□□□□ 0.24
PCDHGA3-201ENST00000253812 APPP05067 770 aa16.54■□□□□ 0.24
PCDHGA3-201ENST00000253812 FANCD2Q9BXW9 1451 aa16.53■□□□□ 0.24
PCDHGA3-201ENST00000253812 FHOD3Q2V2M9 1422 aa16.53■□□□□ 0.24
PCDHGA3-201ENST00000253812 RCAN3Q9UKA8 241 aa16.53■□□□□ 0.24
PCDHGA3-201ENST00000253812 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.53■□□□□ 0.24
PCDHGA3-201ENST00000253812 SETD5Q9C0A6 1442 aa16.52■□□□□ 0.23
PCDHGA3-201ENST00000253812 PHF14O94880 888 aa16.51■□□□□ 0.23
PCDHGA3-201ENST00000253812 FAM43AQ8N2R8 423 aa16.51■□□□□ 0.23
PCDHGA3-201ENST00000253812 MAPK8IP3Q9UPT6 1336 aa16.51■□□□□ 0.23
PCDHGA3-201ENST00000253812 CSPP1Q1MSJ5 1256 aa16.51■□□□□ 0.23
PCDHGA3-201ENST00000253812 SKOR2Q2VWA4 1001 aaPredicted RBP16.5■□□□□ 0.23
PCDHGA3-201ENST00000253812 C14orf37Q86TY3 774 aa16.49■□□□□ 0.23
PCDHGA3-201ENST00000253812 NUDCQ9Y266 331 aa16.49■□□□□ 0.23
PCDHGA3-201ENST00000253812 FOXD1Q16676 465 aa16.49■□□□□ 0.23
PCDHGA3-201ENST00000253812 TPM4P67936 248 aa16.48■□□□□ 0.23
PCDHGA3-201ENST00000253812 GPS2Q13227 327 aa16.48■□□□□ 0.23
PCDHGA3-201ENST00000253812 RWDD1Q9H446 243 aaPredicted RBP16.48■□□□□ 0.23
PCDHGA3-201ENST00000253812 DCAF11Q8TEB1 546 aa16.47■□□□□ 0.23
PCDHGA3-201ENST00000253812 TEX35Q5T0J7 233 aa16.47■□□□□ 0.23
PCDHGA3-201ENST00000253812 A0A0G2JS52 829 aa16.46■□□□□ 0.23
PCDHGA3-201ENST00000253812 JPH4Q96JJ6 628 aa16.46■□□□□ 0.23
PCDHGA3-201ENST00000253812 NAP1L2Q9ULW6 460 aaPredicted RBP16.45■□□□□ 0.22
PCDHGA3-201ENST00000253812 RAB3GAP2Q9H2M9 1393 aa16.45■□□□□ 0.22
PCDHGA3-201ENST00000253812 PLEKHG5O94827 1062 aa16.44■□□□□ 0.22
PCDHGA3-201ENST00000253812 PDE4AP27815 886 aa16.44■□□□□ 0.22
PCDHGA3-201ENST00000253812 PKD2Q13563 968 aa16.44■□□□□ 0.22
PCDHGA3-201ENST00000253812 DDX49Q9Y6V7 483 aaKnown RBP16.43■□□□□ 0.22
PCDHGA3-201ENST00000253812 MFAP1P55081 439 aaKnown RBP16.42■□□□□ 0.22
PCDHGA3-201ENST00000253812 TPM2P07951 284 aa16.41■□□□□ 0.22
PCDHGA3-201ENST00000253812 NOM1Q5C9Z4 860 aaKnown RBP16.41■□□□□ 0.22
PCDHGA3-201ENST00000253812 NCAPD3P42695 1498 aa16.41■□□□□ 0.22
PCDHGA3-201ENST00000253812 CCDC66A2RUB6 948 aa16.41■□□□□ 0.22
PCDHGA3-201ENST00000253812 PMFBP1Q8TBY8 1022 aa16.41■□□□□ 0.22
PCDHGA3-201ENST00000253812 OS9Q13438 667 aaPredicted RBP16.4■□□□□ 0.22
PCDHGA3-201ENST00000253812 MLECQ14165 292 aa16.4■□□□□ 0.22
PCDHGA3-201ENST00000253812 GGT6Q6P531 493 aa16.39■□□□□ 0.22
PCDHGA3-201ENST00000253812 TAOK2Q9UL54 1235 aa16.39■□□□□ 0.22
PCDHGA3-201ENST00000253812 EFCAB2Q5VUJ9 269 aa16.39■□□□□ 0.21
PCDHGA3-201ENST00000253812 IGF1RP08069 1367 aa16.38■□□□□ 0.21
PCDHGA3-201ENST00000253812 MPHOSPH9Q99550 1183 aa16.38■□□□□ 0.21
PCDHGA3-201ENST00000253812 KIAA1211Q6ZU35 1233 aa16.38■□□□□ 0.21
PCDHGA3-201ENST00000253812 FAM161AQ3B820 660 aa16.38■□□□□ 0.21
PCDHGA3-201ENST00000253812 FGD5Q6ZNL6 1462 aa16.37■□□□□ 0.21
PCDHGA3-201ENST00000253812 CC2D1BQ5T0F9 858 aaKnown RBP16.37■□□□□ 0.21
PCDHGA3-201ENST00000253812 IPO8O15397 1037 aaKnown RBP16.37■□□□□ 0.21
PCDHGA3-201ENST00000253812 TULP1O00294 542 aaPredicted RBP16.37■□□□□ 0.21
PCDHGA3-201ENST00000253812 RAD54L2Q9Y4B4 1467 aa16.36■□□□□ 0.21
PCDHGA3-201ENST00000253812 HNRNPMP52272 730 aaKnown RBP eCLIP16.36■□□□□ 0.21
PCDHGA3-201ENST00000253812 SLC4A3P48751 1232 aa16.35■□□□□ 0.21
PCDHGA3-201ENST00000253812 POGKQ9P215 609 aa16.35■□□□□ 0.21
PCDHGA3-201ENST00000253812 KANK1Q14678 1352 aa16.35■□□□□ 0.21
PCDHGA3-201ENST00000253812 TPM3P06753 285 aa16.35■□□□□ 0.21
PCDHGA3-201ENST00000253812 RRP9O43818 475 aaKnown RBP16.35■□□□□ 0.21
PCDHGA3-201ENST00000253812 HAP1P54257 671 aaPredicted RBP16.35■□□□□ 0.21
PCDHGA3-201ENST00000253812 NUP155O75694 1391 aa16.35■□□□□ 0.21
PCDHGA3-201ENST00000253812 CCDC34Q96HJ3 373 aa16.34■□□□□ 0.21
PCDHGA3-201ENST00000253812 PDE3BQ13370 1112 aa16.34■□□□□ 0.21
PCDHGA3-201ENST00000253812 IL27Q8NEV9 243 aa16.33■□□□□ 0.2
PCDHGA3-201ENST00000253812 HSPA5P11021 654 aaKnown RBP16.33■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms