RNA–Protein interactions for RNA: ENST00000251654.8

PCCB-201, Transcript of propionyl-CoA carboxylase subunit beta, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCCB, Length 1,833 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCB-201ENST00000251654 AKNAQ7Z591 1439 aa25.62■■□□□ 1.69
PCCB-201ENST00000251654 PREX2Q70Z35 1606 aa25.59■■□□□ 1.69
PCCB-201ENST00000251654 TTC37Q6PGP7 1564 aa25.59■■□□□ 1.69
PCCB-201ENST00000251654 ABCC5O15440 1437 aa25.58■■□□□ 1.69
PCCB-201ENST00000251654 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP25.57■■□□□ 1.683e-8■■■□□ 16.7
PCCB-201ENST00000251654 CDC42BPBQ9Y5S2 1711 aa25.57■■□□□ 1.68
PCCB-201ENST00000251654 MAPKBP1O60336 1514 aa25.55■■□□□ 1.68
PCCB-201ENST00000251654 CROCC2H7BZ55 1655 aa25.55■■□□□ 1.68
PCCB-201ENST00000251654 ROCK1Q13464 1354 aa25.52■■□□□ 1.68
PCCB-201ENST00000251654 CHIC2Q9UKJ5 165 aa25.51■■□□□ 1.67
PCCB-201ENST00000251654 MYO5CQ9NQX4 1742 aa25.5■■□□□ 1.67
PCCB-201ENST00000251654 ADGBQ8N7X0 1667 aa25.48■■□□□ 1.67
PCCB-201ENST00000251654 ZNF777Q9ULD5 760 aaPredicted RBP25.48■■□□□ 1.67
PCCB-201ENST00000251654 SAMD9LQ8IVG5 1584 aa25.48■■□□□ 1.67
PCCB-201ENST00000251654 RRP7BPQ9NSQ0 103 aa25.47■■□□□ 1.67
PCCB-201ENST00000251654 KDM6BO15054 1643 aa25.47■■□□□ 1.67
PCCB-201ENST00000251654 ARHGEF5Q12774 1597 aa25.44■■□□□ 1.66
PCCB-201ENST00000251654 ADGRL2O95490 1459 aa25.43■■□□□ 1.66
PCCB-201ENST00000251654 WDR7Q9Y4E6 1490 aa25.43■■□□□ 1.66
PCCB-201ENST00000251654 SHANK2Q9UPX8 1470 aa25.42■■□□□ 1.66
PCCB-201ENST00000251654 ARHGAP5Q13017 1502 aa25.41■■□□□ 1.66
PCCB-201ENST00000251654 MBD5Q9P267 1494 aa25.41■■□□□ 1.66
PCCB-201ENST00000251654 KCNH8Q96L42 1107 aa25.4■■□□□ 1.66
PCCB-201ENST00000251654 NCOA1Q15788 1441 aa25.39■■□□□ 1.66
PCCB-201ENST00000251654 PLCH2O75038 1416 aa25.36■■□□□ 1.65
PCCB-201ENST00000251654 SYCP2Q9BX26 1530 aa25.35■■□□□ 1.65
PCCB-201ENST00000251654 C9orf84Q5VXU9 1444 aa25.34■■□□□ 1.65
PCCB-201ENST00000251654 ASXL2Q76L83 1435 aa25.34■■□□□ 1.65
PCCB-201ENST00000251654 CCDC141Q6ZP82 1450 aa25.33■■□□□ 1.65
PCCB-201ENST00000251654 ARAP3Q8WWN8 1544 aa25.33■■□□□ 1.65
PCCB-201ENST00000251654 ABCA9Q8IUA7 1624 aa25.33■■□□□ 1.65
PCCB-201ENST00000251654 HNRNPMP52272 730 aaKnown RBP eCLIP25.3■■□□□ 1.641e-7■■■□□ 18.3
PCCB-201ENST00000251654 ANKRD30AQ9BXX3 1397 aa25.3■■□□□ 1.64
PCCB-201ENST00000251654 KIAA1107Q9UPP5 1409 aa25.3■■□□□ 1.64
PCCB-201ENST00000251654 PLEKHH2Q8IVE3 1493 aa25.3■■□□□ 1.64
PCCB-201ENST00000251654 DENND4BO75064 1496 aaPredicted RBP25.29■■□□□ 1.64
PCCB-201ENST00000251654 MAST1Q9Y2H9 1570 aa25.26■■□□□ 1.63
PCCB-201ENST00000251654 ABCC1P33527 1531 aa25.26■■□□□ 1.63
PCCB-201ENST00000251654 RIMBP3CA6NJZ7 1639 aa25.26■■□□□ 1.63
PCCB-201ENST00000251654 RIMBP3BA6NNM3 1639 aa25.26■■□□□ 1.63
PCCB-201ENST00000251654 RIMBP3Q9UFD9 1639 aa25.26■■□□□ 1.63
PCCB-201ENST00000251654 ARHGEF12Q9NZN5 1544 aa25.26■■□□□ 1.63
PCCB-201ENST00000251654 RSPH4AQ5TD94 716 aa25.25■■□□□ 1.63
PCCB-201ENST00000251654 ACIN1Q9UKV3 1341 aaKnown RBP25.24■■□□□ 1.63
PCCB-201ENST00000251654 TSPY4P0CV99 314 aa25.23■■□□□ 1.63
PCCB-201ENST00000251654 TSPY10P0CW01 314 aa25.23■■□□□ 1.63
PCCB-201ENST00000251654 EFCAB2Q5VUJ9 269 aa25.22■■□□□ 1.63
PCCB-201ENST00000251654 NPM1P06748 294 aaKnown RBP eCLIP25.21■■□□□ 1.63
PCCB-201ENST00000251654 ANKRD50Q9ULJ7 1429 aa25.21■■□□□ 1.63
PCCB-201ENST00000251654 SIN3AQ96ST3 1273 aa25.21■■□□□ 1.63
PCCB-201ENST00000251654 TRIM52Q96A61 297 aa25.19■■□□□ 1.62
PCCB-201ENST00000251654 KIF15Q9NS87 1388 aa25.18■■□□□ 1.62
PCCB-201ENST00000251654 PLXNC1O60486 1568 aa25.17■■□□□ 1.62
PCCB-201ENST00000251654 FANCAO15360 1455 aa25.16■■□□□ 1.62
PCCB-201ENST00000251654 MPHOSPH9Q99550 1183 aa25.16■■□□□ 1.62
PCCB-201ENST00000251654 PZPP20742 1482 aa25.14■■□□□ 1.62
PCCB-201ENST00000251654 NEUROD1Q13562 356 aa25.12■■□□□ 1.61
PCCB-201ENST00000251654 TRAPPC8Q9Y2L5 1435 aa25.12■■□□□ 1.61
PCCB-201ENST00000251654 TIMELESSQ9UNS1 1208 aa25.12■■□□□ 1.61
PCCB-201ENST00000251654 CYB5RLQ6IPT4 315 aa25.09■■□□□ 1.61
PCCB-201ENST00000251654 KDM5DQ9BY66 1539 aa25.09■■□□□ 1.61
PCCB-201ENST00000251654 ZFYVE16Q7Z3T8 1539 aa25.05■■□□□ 1.6
PCCB-201ENST00000251654 ADGRL1O94910 1474 aa25.05■■□□□ 1.6
PCCB-201ENST00000251654 ZNF316A6NFI3 1004 aaPredicted RBP25.05■■□□□ 1.6
PCCB-201ENST00000251654 SLC4A1APQ9BWU0 796 aaKnown RBP25.05■■□□□ 1.6
PCCB-201ENST00000251654 DUOX2Q9NRD8 1548 aa25.03■■□□□ 1.6
PCCB-201ENST00000251654 CD109Q6YHK3 1445 aa25.03■■□□□ 1.6
PCCB-201ENST00000251654 CFAP74Q9C0B2 1584 aa25.03■■□□□ 1.6
PCCB-201ENST00000251654 ANKRD30BQ9BXX2 1392 aa25.03■■□□□ 1.6
PCCB-201ENST00000251654 UNC13BO14795 1591 aa25.01■■□□□ 1.59
PCCB-201ENST00000251654 INO80Q9ULG1 1556 aaPredicted RBP25.01■■□□□ 1.59
PCCB-201ENST00000251654 FOXD1Q16676 465 aa25.01■■□□□ 1.59
PCCB-201ENST00000251654 RTEL1-TNFRSF6BF6WH68 1400 aa25.01■■□□□ 1.59
PCCB-201ENST00000251654 TONSLQ96HA7 1378 aa25■■□□□ 1.59
PCCB-201ENST00000251654 SCAPERQ9BY12 1400 aa24.99■■□□□ 1.59
PCCB-201ENST00000251654 NUP155O75694 1391 aa24.99■■□□□ 1.59
PCCB-201ENST00000251654 AFAP1Q8N556 730 aa24.98■■□□□ 1.59
PCCB-201ENST00000251654 ERBINQ96RT1 1412 aa24.98■■□□□ 1.59
PCCB-201ENST00000251654 ATP7AQ04656 1500 aa24.96■■□□□ 1.59
PCCB-201ENST00000251654 MAP3K4Q9Y6R4 1608 aa24.96■■□□□ 1.59
PCCB-201ENST00000251654 SPAG9O60271 1321 aaKnown RBP24.96■■□□□ 1.59
PCCB-201ENST00000251654 RPRD2Q5VT52 1461 aaKnown RBP24.95■■□□□ 1.59
PCCB-201ENST00000251654 PPP1R15AO75807 674 aaPredicted RBP24.95■■□□□ 1.58
PCCB-201ENST00000251654 GLI2P10070 1586 aa24.94■■□□□ 1.58
PCCB-201ENST00000251654 FAM135AQ9P2D6 1515 aa24.94■■□□□ 1.58
PCCB-201ENST00000251654 MAGI2Q86UL8 1455 aa24.94■■□□□ 1.58
PCCB-201ENST00000251654 ZNF518AQ6AHZ1 1483 aa24.91■■□□□ 1.58
PCCB-201ENST00000251654 IQGAP3Q86VI3 1631 aa24.91■■□□□ 1.58
PCCB-201ENST00000251654 PKD2Q13563 968 aa24.91■■□□□ 1.58
PCCB-201ENST00000251654 NEO1Q92859 1461 aa24.89■■□□□ 1.58
PCCB-201ENST00000251654 KDM5CP41229 1560 aa24.89■■□□□ 1.58
PCCB-201ENST00000251654 KIDINS220Q9ULH0 1771 aa24.89■■□□□ 1.57
PCCB-201ENST00000251654 DIP2BQ9P265 1576 aa24.88■■□□□ 1.57
PCCB-201ENST00000251654 POGZQ7Z3K3 1410 aa24.88■■□□□ 1.57
PCCB-201ENST00000251654 TEX14Q8IWB6 1497 aa24.86■■□□□ 1.57
PCCB-201ENST00000251654 DEPDC5O75140 1603 aa24.84■■□□□ 1.57
PCCB-201ENST00000251654 DIEXFQ68CQ4 756 aaKnown RBP24.84■■□□□ 1.57
PCCB-201ENST00000251654 EIF2AK4Q9P2K8 1649 aaKnown RBP24.82■■□□□ 1.56
PCCB-201ENST00000251654 HECW2Q9P2P5 1572 aa24.8■■□□□ 1.56
PCCB-201ENST00000251654 MLH3Q9UHC1 1453 aa24.79■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms