RNA–Protein interactions for RNA: ENST00000250559.13

RAP1B-201, Transcript of RAP1B, member of RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAP1B, Length 13,438 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAP1B-201ENST00000250559 UPF2Q9HAU5 1272 aaKnown RBP6.23□□□□□ -1.41
RAP1B-201ENST00000250559 HNRNPMP52272 730 aaKnown RBP eCLIP6.22□□□□□ -1.41
RAP1B-201ENST00000250559 HSPA5P11021 654 aaKnown RBP6.22□□□□□ -1.41
RAP1B-201ENST00000250559 GOLGA6L2Q8N9W4 650 aaPredicted RBP6.22□□□□□ -1.41
RAP1B-201ENST00000250559 SETD5Q9C0A6 1442 aa6.22□□□□□ -1.41
RAP1B-201ENST00000250559 EVA1CP58658 441 aa6.21□□□□□ -1.41
RAP1B-201ENST00000250559 TPRNQ4KMQ1 711 aa6.21□□□□□ -1.42
RAP1B-201ENST00000250559 RAB3GAP2Q9H2M9 1393 aa6.21□□□□□ -1.42
RAP1B-201ENST00000250559 FHAD1B1AJZ9 1412 aa6.21□□□□□ -1.42
RAP1B-201ENST00000250559 ATAD2BQ9ULI0 1458 aa6.2□□□□□ -1.42
RAP1B-201ENST00000250559 FRAT1Q92837 279 aaPredicted RBP6.2□□□□□ -1.42
RAP1B-201ENST00000250559 PKD2Q13563 968 aa6.2□□□□□ -1.42
RAP1B-201ENST00000250559 ECM2O94769 699 aaPredicted RBP6.2□□□□□ -1.42
RAP1B-201ENST00000250559 HSPA2P54652 639 aa6.19□□□□□ -1.42
RAP1B-201ENST00000250559 U2SURPO15042 1029 aaKnown RBP6.19□□□□□ -1.42
RAP1B-201ENST00000250559 EIF5BO60841 1220 aaKnown RBP6.19□□□□□ -1.42
RAP1B-201ENST00000250559 B4GALNT3Q6L9W6 998 aa6.19□□□□□ -1.42
RAP1B-201ENST00000250559 UBAP1LF5GYI3 381 aa6.18□□□□□ -1.42
RAP1B-201ENST00000250559 ADAMTS2O95450 1211 aa6.18□□□□□ -1.42
RAP1B-201ENST00000250559 RGS3P49796 1198 aa6.18□□□□□ -1.42
RAP1B-201ENST00000250559 G3V3G9 751 aa6.17□□□□□ -1.42
RAP1B-201ENST00000250559 DCAF8Q5TAQ9 597 aa6.17□□□□□ -1.42
RAP1B-201ENST00000250559 NUTM2GQ5VZR2 741 aa6.16□□□□□ -1.42
RAP1B-201ENST00000250559 MPHOSPH9Q99550 1183 aa6.16□□□□□ -1.42
RAP1B-201ENST00000250559 SRPK2P78362 688 aaKnown RBP6.16□□□□□ -1.42
RAP1B-201ENST00000250559 CAPN15O75808 1086 aa6.15□□□□□ -1.42
RAP1B-201ENST00000250559 ANO8Q9HCE9 1232 aaPredicted RBP6.15□□□□□ -1.42
RAP1B-201ENST00000250559 SAMD1Q6SPF0 538 aaPredicted RBP6.15□□□□□ -1.42
RAP1B-201ENST00000250559 NUP155O75694 1391 aa6.15□□□□□ -1.42
RAP1B-201ENST00000250559 CFAP53Q96M91 514 aa6.15□□□□□ -1.42
RAP1B-201ENST00000250559 FBXW7Q969H0 707 aa6.15□□□□□ -1.43
RAP1B-201ENST00000250559 FTSJ3Q8IY81 847 aaKnown RBP6.15□□□□□ -1.43
RAP1B-201ENST00000250559 PDS5BQ9NTI5 1447 aa6.15□□□□□ -1.43
RAP1B-201ENST00000250559 RAD54L2Q9Y4B4 1467 aa6.15□□□□□ -1.43
RAP1B-201ENST00000250559 FANCD2Q9BXW9 1451 aa6.15□□□□□ -1.43
RAP1B-201ENST00000250559 ROCK2O75116 1388 aaKnown RBP6.14□□□□□ -1.43
RAP1B-201ENST00000250559 MAPK8IP3Q9UPT6 1336 aa6.14□□□□□ -1.43
RAP1B-201ENST00000250559 ZNF219Q9P2Y4 722 aaPredicted RBP6.14□□□□□ -1.43
RAP1B-201ENST00000250559 MYH16Q9H6N6 1097 aa6.14□□□□□ -1.43
RAP1B-201ENST00000250559 ZNF428Q96B54 188 aa6.14□□□□□ -1.43
RAP1B-201ENST00000250559 CADPSQ9ULU8 1353 aa6.14□□□□□ -1.43
RAP1B-201ENST00000250559 NCLP19338 710 aaKnown RBP6.14□□□□□ -1.43
RAP1B-201ENST00000250559 L3MBTL2Q969R5 705 aa6.13□□□□□ -1.43
RAP1B-201ENST00000250559 FAM177BA6PVY3 158 aa6.13□□□□□ -1.43
RAP1B-201ENST00000250559 TMF1P82094 1093 aa6.13□□□□□ -1.43
RAP1B-201ENST00000250559 RTN4Q9NQC3 1192 aaKnown RBP6.13□□□□□ -1.43
RAP1B-201ENST00000250559 XPCQ01831 940 aaPredicted RBP6.13□□□□□ -1.43
RAP1B-201ENST00000250559 SPRYD3Q8NCJ5 442 aa6.12□□□□□ -1.43
RAP1B-201ENST00000250559 TCERG1O14776 1098 aaKnown RBP6.12□□□□□ -1.43
RAP1B-201ENST00000250559 STRN4Q9NRL3 753 aa6.12□□□□□ -1.43
RAP1B-201ENST00000250559 CEBPAP49715 358 aaPredicted RBP6.12□□□□□ -1.43
RAP1B-201ENST00000250559 DHX57Q6P158 1386 aaKnown RBP6.12□□□□□ -1.43
RAP1B-201ENST00000250559 EID1Q9Y6B2 187 aa6.12□□□□□ -1.43
RAP1B-201ENST00000250559 KIF3BO15066 747 aa6.12□□□□□ -1.43
RAP1B-201ENST00000250559 FMN1Q68DA7 1419 aa6.11□□□□□ -1.43
RAP1B-201ENST00000250559 FGD5Q6ZNL6 1462 aa6.11□□□□□ -1.43
RAP1B-201ENST00000250559 KANK1Q14678 1352 aa6.11□□□□□ -1.43
RAP1B-201ENST00000250559 GTF2E1P29083 439 aaPredicted RBP6.11□□□□□ -1.43
RAP1B-201ENST00000250559 ZNF526Q8TF50 670 aaPredicted RBP6.11□□□□□ -1.43
RAP1B-201ENST00000250559 NGEFQ8N5V2 710 aa6.11□□□□□ -1.43
RAP1B-201ENST00000250559 NGDNQ8NEJ9 315 aaKnown RBP6.11□□□□□ -1.43
RAP1B-201ENST00000250559 CARMIL2Q6F5E8 1435 aa6.11□□□□□ -1.43
RAP1B-201ENST00000250559 PROSER2Q86WR7 435 aaPredicted RBP6.11□□□□□ -1.43
RAP1B-201ENST00000250559 PPP4R2Q9NY27 417 aa6.11□□□□□ -1.43
RAP1B-201ENST00000250559 MORC1Q86VD1 984 aa6.11□□□□□ -1.43
RAP1B-201ENST00000250559 CCDC146Q8IYE0 955 aa6.1□□□□□ -1.43
RAP1B-201ENST00000250559 ANP32BQ92688 251 aaKnown RBP6.1□□□□□ -1.43
RAP1B-201ENST00000250559 KIF21BO75037 1637 aa6.1□□□□□ -1.43
RAP1B-201ENST00000250559 CCDC18Q5T9S5 1454 aa6.1□□□□□ -1.43
RAP1B-201ENST00000250559 KTN1Q86UP2 1357 aaKnown RBP6.09□□□□□ -1.43
RAP1B-201ENST00000250559 CDCA8Q53HL2 280 aa6.09□□□□□ -1.43
RAP1B-201ENST00000250559 DISP3Q9P2K9 1392 aa6.09□□□□□ -1.43
RAP1B-201ENST00000250559 ZNF644Q9H582 1327 aaPredicted RBP6.09□□□□□ -1.44
RAP1B-201ENST00000250559 APBB1O00213 710 aa6.08□□□□□ -1.44
RAP1B-201ENST00000250559 ANP32EQ9BTT0 268 aa6.08□□□□□ -1.44
RAP1B-201ENST00000250559 IBSPP21815 317 aaPredicted RBP6.08□□□□□ -1.44
RAP1B-201ENST00000250559 NUDCQ9Y266 331 aa6.08□□□□□ -1.44
RAP1B-201ENST00000250559 NESP48681 1621 aa6.08□□□□□ -1.44
RAP1B-201ENST00000250559 RBM19Q9Y4C8 960 aaKnown RBP6.08□□□□□ -1.44
RAP1B-201ENST00000250559 ATF3P18847 181 aa6.08□□□□□ -1.44
RAP1B-201ENST00000250559 CLSTN1O94985 981 aa6.08□□□□□ -1.44
RAP1B-201ENST00000250559 TMX4Q9H1E5 349 aaPredicted RBP6.08□□□□□ -1.44
RAP1B-201ENST00000250559 SYNJ1O43426 1573 aa6.07□□□□□ -1.44
RAP1B-201ENST00000250559 SUGP2Q8IX01 1082 aaKnown RBP eCLIP6.07□□□□□ -1.44
RAP1B-201ENST00000250559 WDR70Q9NW82 654 aa6.07□□□□□ -1.44
RAP1B-201ENST00000250559 ANKRD30AQ9BXX3 1397 aa6.07□□□□□ -1.44
RAP1B-201ENST00000250559 EFCAB2Q5VUJ9 269 aa6.06□□□□□ -1.44
RAP1B-201ENST00000250559 IGF1RP08069 1367 aa6.06□□□□□ -1.44
RAP1B-201ENST00000250559 DDRGK1Q96HY6 314 aa6.06□□□□□ -1.44
RAP1B-201ENST00000250559 PRDM2Q13029 1718 aa6.06□□□□□ -1.44
RAP1B-201ENST00000250559 PLIN1O60240 522 aa6.06□□□□□ -1.44
RAP1B-201ENST00000250559 NOP58Q9Y2X3 529 aaKnown RBP6.06□□□□□ -1.44
RAP1B-201ENST00000250559 NGLY1Q96IV0 654 aa6.06□□□□□ -1.44
RAP1B-201ENST00000250559 CLUAP1Q96AJ1 413 aa6.05□□□□□ -1.44
RAP1B-201ENST00000250559 AQRO60306 1485 aaKnown RBP eCLIP6.05□□□□□ -1.441e-6■■■■□ 26.1
RAP1B-201ENST00000250559 BECN1Q14457 450 aa6.05□□□□□ -1.44
RAP1B-201ENST00000250559 TRAK1Q9UPV9 953 aa6.05□□□□□ -1.44
RAP1B-201ENST00000250559 GOLGA2Q08379 1002 aa6.05□□□□□ -1.44
RAP1B-201ENST00000250559 WASHC2CQ9Y4E1 1318 aa6.05□□□□□ -1.44
RAP1B-201ENST00000250559 RAD21O60216 631 aa6.05□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms